Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00277 ATGGCGGCCCTGCGAATTCTCTTCTCTGTTTTTCTCCTCCATCTTCTTCTTCTCTTTCCCACCGCTTTGGGATACTCCAAAAAGGAAATTATCAGCTGGTGCAGCCAAATGCCATATCCAAAACCTTGCGAGTTTTTCTTAACACAAAACCCTTCTGTCTCCCCCATCAGAAGTAAATCTGATTTTCTGAAAATCGCCATTAAACTAGCTCTAGACCGAGCTGTAAACGCAGAGAAGAACACGCTTTTACTTGGTCTCAAGTGTAGAAACGAGAAAGAAAAGGCTGCCTGGACCGACTGCCTAGAGCTTTACAAATACACCATTGAAAAGCTCAACAAAACCATCGACCCGAACAGCAAGTGCAGCGACCACGACTCGCAGTCATGGATGAGTACGGCTCTGACAAACCTCGAGACCTGCTGGGCTGGGTTCGCAGAGCTCGGCGTCACCGACTACCTTCCTCCATTGATGACTAACAACGTTTCGAAATTGATCAGCAACACTTTGTCTCTAAACAAGCCTCTGTACAACCCAAAACCCATATACAAACACGGGTTTCCGACGTGGGTTAAGCCAGGTGACCGGAAACTGTTGCAGGCGCCTTCTCCGGCGGAATCTGCAAATATAGTGGTGGCTCAAGATGGGTCTGGAAATTATGACACGATTAGTGCCGCTGTTAATGCTGCCTCTGACCGGTCTGGAACCGGGAGGTACGTGATTTATGTGAAAGCAGGAACTTATAAAGAGAACATCGAGATAAAAACGAAGAACATTATGTTCGTCGGAGATGGAATCGGGAAAACCATCATTACCGGAAGTAAAAGCGTTGGTGGAGGTACCACAACCTTCCGGTCAGCCACTGTAGAATGTGGTATTAACCGTGAAGCTCAAGTGGGCCCTTCAGAGACATTATTGGCCAATGAGGAGGTACGTGGCTTTGGAAACGAAGTTGCTATTATTTTGCATTCTGTCTCAGCAAATTTAAACGAAGAGGACGATGAGGAACTCCGATCAGCATGCCAATCCACTAGTGATGAAGAGATGGACATGCAGAGAGTAGACTGA 1065 46.85 MAALRILFSVFLLHLLLLFPTALGYSKKEIISWCSQMPYPKPCEFFLTQNPSVSPIRSKSDFLKIAIKLALDRAVNAEKNTLLLGLKCRNEKEKAAWTDCLELYKYTIEKLNKTIDPNSKCSDHDSQSWMSTALTNLETCWAGFAELGVTDYLPPLMTNNVSKLISNTLSLNKPLYNPKPIYKHGFPTWVKPGDRKLLQAPSPAESANIVVAQDGSGNYDTISAAVNAASDRSGTGRYVIYVKAGTYKENIEIKTKNIMFVGDGIGKTIITGSKSVGGGTTTFRSATVECGINREAQVGPSETLLANEEVRGFGNEVAIILHSVSANLNEEDDEELRSACQSTSDEEMDMQRVD 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2673369 2675270 - BLOR10007 Blo02g00277 56507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00277 354 Gene3D - 206 307 IPR012334 -
Blo02g00277 354 SMART PMEI_2 25 171 IPR006501 GO:0004857
Blo02g00277 354 CDD PMEI-like_3 32 175 - -
Blo02g00277 354 ProSitePatterns Pectinesterase signature 1. 234 253 IPR018040 -
Blo02g00277 354 SUPERFAMILY Pectin lyase-like 203 288 IPR011050 -
Blo02g00277 354 Pfam Pectinesterase 208 289 IPR000070 GO:0030599|GO:0042545
Blo02g00277 354 Pfam Plant invertase/pectin methylesterase inhibitor 30 171 IPR006501 GO:0004857
Blo02g00277 354 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 175 IPR035513 -
Blo02g00277 354 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 176 IPR035513 -
Blo02g00277 354 PANTHER PECTINESTERASE 9 289 - -
Blo02g00277 354 PANTHER PECTINESTERASE 9 289 - -
Blo02g00277 354 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 173 IPR006501 GO:0004857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00277 Blo-Chr2:2673369 Blo16g00613 Blo-Chr16:24726464 1.64E-159 dispersed
Blo02g00277 Blo-Chr2:2673369 Blo06g01091 Blo-Chr6:34203091 8.86E-100 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00277 K01051 - vvi:100255703 395.971