Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00288 ATGGATCAAGTATCAGCACAGGGCCGTCCAATCCTACCACCTTTTCTCTCGAGGGATCTTCATCTCCACCCTCATCACCAATTCCAGCATCACCAGCAGCAAAACTCTGAAGACGAGCAGAGCGGCAATGGAAGCATAAACCACGGCCCAAAAAGAGAGCGAGATGAAAACAACACCTCCTCTACAACAAAGACCGCCACACCCGAGAGCAAAGAGCTCAGCAACAACGTAGGAGGAGATGGAGAAATCACAAGAAGGCCAAGAGGAAGACCGGCTGGGTCAAAAAACAAGCCTAAACCACCGATCATAATCACTAGAGACAGCGCAAACGCCCTCCGATCTCACGTCATGGAAATCACCAACGGCTGTGATATTATGGAGAGTATTTCAACCTTCGCAAGAAGAAGACAGAGAGGGATTTGTATTCTGAGTGGAAGTGGAACAGTAACCAATGTCACTCTGAAACAACCAGCTTCTCCCGGAGCAGTGGTCACTCTACATGGACGATTTGAGATTCTCTCACTTTCCGGCTCGTTTCTGCCACCTCCGGCTCCGGCTGCAGCTTCTGGGTTGACCATATACTTGGCTGGTGGACAAGGGCAGGTGGTCGGAGGAATTGTGGCTGGGCCGCTTTTAGCTGCAGGACCGGTGGTTATCATGGCTGCTTCTTTTGGAAATGCAGCATATGAGAGGCTGCCCATCGATGATGACGAGACTACAGTGCCGGTTCCGGGAAGTGGACCAGTCGGATCGCCGGGAATTCTTGGACAGCAGCAACAACAACTCTTTCCAGATCCCACCTCATCTTTGTTTCATGGGATGCCTCCTAATCTCTTGAATTCATGTCAATTGCCTTCTGAGGGCTATTGGAGCACTGGTCGACCTCCTTTTAATTAA 897 50.39 MDQVSAQGRPILPPFLSRDLHLHPHHQFQHHQQQNSEDEQSGNGSINHGPKRERDENNTSSTTKTATPESKELSNNVGGDGEITRRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEITNGCDIMESISTFARRRQRGICILSGSGTVTNVTLKQPASPGAVVTLHGRFEILSLSGSFLPPPAPAAASGLTIYLAGGQGQVVGGIVAGPLLAAGPVVIMAASFGNAAYERLPIDDDETTVPVPGSGPVGSPGILGQQQQQLFPDPTSSLFHGMPPNLLNSCQLPSEGYWSTGRPPFN 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2794691 2795587 + BLOR10018 Blo02g00288 56518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00288 298 ProSiteProfiles PPC domain profile profile. 109 247 IPR005175 -
Blo02g00288 298 Pfam Plants and Prokaryotes Conserved (PCC) domain 113 225 IPR005175 -
Blo02g00288 298 PIRSF ESCAROLA 17 297 IPR014476 GO:0003680
Blo02g00288 298 CDD DUF296 113 224 IPR005175 -
Blo02g00288 298 SUPERFAMILY AF0104/ALDC/Ptd012-like 109 243 - -
Blo02g00288 298 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 5 297 - -
Blo02g00288 298 MobiDBLite consensus disorder prediction 1 103 - -
Blo02g00288 298 MobiDBLite consensus disorder prediction 237 256 - -
Blo02g00288 298 Gene3D - 112 242 - -
Blo02g00288 298 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 5 297 IPR014476 GO:0003680
Blo02g00288 298 MobiDBLite consensus disorder prediction 60 74 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00288 Blo-Chr2:2794691 Blo03g00206 Blo-Chr3:4807881 2.89E-114 dispersed
Blo02g00288 Blo-Chr2:2794691 Blo03g00383 Blo-Chr3:9086916 1.71E-117 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00288 - - jre:108980480 435.647