Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00304 ATGACCACCCACTCTCCGGCGACCCGTATGCGTGTAGGAAGATACGAGCTAGGTCGAACTCTGGGCGAGGGGAGCTTTGCTAAAGTCAAGTTCGCCACGAACCTCGACACATCCCAATACGTTGCCATCAAGATTCTCGACCGCGACAAAGTCCTCCGCCACAAGATGGTTGAACAGATTAAGACAGAAATATCCACAATGAAGTTGATAAAGCATCCAAATGTAATTCAGATTTATGAGGTCATGGCCAGCAAATCGAAAATCTATATCGTGCTCGAGTTTGTGGATGGTGGTGAGCTTTTCGACAAAATAGCTGCAAATGGGAGATTTAAAGAAGATGAAGCAAGAAAATACTTCCAGCAGCTCATTAATGCCGTAGATTACTGCCATAGCCGGGGCGTGTACCACCGGGACCTGAAGCCAGAAAATCTCCTATTGGATTCATACGGTGTTCTTAAAGTTTCTGACTTTGGATTGAGTGCATTGTCACAGCAGATGAAAGATGACGGTTTGCTTCACACTGCCTGCGGGACCCCAAATTATGTCGCTCCTGAGGTTCTTAATGATAAAGGTTACGATGGAACTGCCTCTGATATTTGGTCTTGTGGGGTCATTCTGTTTGTTCTCATGGCTGGGTTCTTGCCCTTTGATGAATCAAATCTAATGGCTTTGTATAGGAAAATTAGCAAGGCTGCCTTTGCTTGTCCCTCGTGGTTTTCATCGGGCGCGAAGAGACTGATTAAGCGTATTCTCGATCCGAACCCTTGCACGCGGATAACAATCCCGGAAATTCTAGAAGATGAATGGTTCAAGAAAGGTTATAAACCTCCCCACTTTGAAACGGAAAATGATGTAAATCTGGATGATATTGATGCTGTGTTCAATGATTCAAAGGAACATCTCGTGACAGAGAGGAGGGAGAAACCCGTGTCGATGAACGCTTTCGAGCTTATTTCCAGGTCGCCGGGTTTCAGCCTCGATAATTTATTTGAAAAACAAAAGGGTCATGTGAAAAGAGAGACGCATTTCACGTCCCAATCTCCTGCAAATGAAATCATATCTAAGATCGAGGAAGCTGCAAAGCCTCTGGGGTTCAATGTTCGGAAGAACAATTACAAGATGAAATTACAAGGTGACAAGACTGGCCGGAAAGGACACCTCTCTGTCGCCACCGAGGTGTTTGAGGTTGCTCCTTCATTACACATGGTGGAGCTACGAAAAACGGGCGGCGACACTCTCGAATTTCACAAGGCATGTCAAATATGA 1266 45.34 MTTHSPATRMRVGRYELGRTLGEGSFAKVKFATNLDTSQYVAIKILDRDKVLRHKMVEQIKTEISTMKLIKHPNVIQIYEVMASKSKIYIVLEFVDGGELFDKIAANGRFKEDEARKYFQQLINAVDYCHSRGVYHRDLKPENLLLDSYGVLKVSDFGLSALSQQMKDDGLLHTACGTPNYVAPEVLNDKGYDGTASDIWSCGVILFVLMAGFLPFDESNLMALYRKISKAAFACPSWFSSGAKRLIKRILDPNPCTRITIPEILEDEWFKKGYKPPHFETENDVNLDDIDAVFNDSKEHLVTERREKPVSMNAFELISRSPGFSLDNLFEKQKGHVKRETHFTSQSPANEIISKIEEAAKPLGFNVRKNNYKMKLQGDKTGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHKACQI 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3068255 3071109 - BLOR10034 Blo02g00304 56534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00304 421 Pfam Protein kinase domain 15 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo02g00304 421 CDD STKc_SnRK3 14 269 - -
Blo02g00304 421 ProSiteProfiles Protein kinase domain profile. 15 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo02g00304 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Blo02g00304 421 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 7 417 - -
Blo02g00304 421 SMART serkin_6 15 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo02g00304 421 Gene3D Transferase(Phosphotransferase) domain 1 95 277 - -
Blo02g00304 421 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Blo02g00304 421 Gene3D Phosphorylase Kinase; domain 1 5 94 - -
Blo02g00304 421 ProSiteProfiles NAF domain profile. 307 331 IPR018451 GO:0007165
Blo02g00304 421 Pfam NAF domain 309 369 IPR004041 GO:0007165
Blo02g00304 421 Gene3D Kinase associated domain 1, KA1 306 421 - -
Blo02g00304 421 SUPERFAMILY Protein kinase-like (PK-like) 12 301 IPR011009 -
Blo02g00304 421 PANTHER - 7 417 - -
Blo02g00304 421 CDD CIPK_C 313 419 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00021 Blo-Chr1:318551 Blo02g00304 Blo-Chr2:3068255 9.25E-136 dispersed
Blo02g00304 Blo-Chr2:3068255 Blo08g00559 Blo-Chr8:18575560 0 dispersed
Blo03g00930 Blo-Chr3:35292007 Blo02g00304 Blo-Chr2:3068255 7.51E-07 dispersed
Blo14g00635 Blo-Chr14:12593473 Blo02g00304 Blo-Chr2:3068255 1.25E-135 dispersed
Blo14g00740 Blo-Chr14:19882986 Blo02g00304 Blo-Chr2:3068255 1.27E-131 dispersed
Blo17g00089 Blo-Chr17:685700 Blo02g00304 Blo-Chr2:3068255 2.11E-153 dispersed
Blo17g00372 Blo-Chr17:4116336 Blo02g00304 Blo-Chr2:3068255 7.53E-81 dispersed
Blo18g00399 Blo-Chr18:4266530 Blo02g00304 Blo-Chr2:3068255 6.58E-86 dispersed
Blo02g00304 Blo-Chr2:3068255 Blo03g01518 Blo-Chr3:42071254 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84139 PF00069 Pkinase 5.40E-74 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00304 - - twl:119982522 727.243