Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo02g00322 | ATGCCCTTTACCCGACTAATGGAGTTGAAGATGGAGGACGGTTTGGGCGGCGGCGGGTGGAATGAGGAGGCAAAGAGCATAGTGGATGTAGTCCTGAGTCGTCAAGCCTTCGACTACTTGATATCGAGTTCGTGTTCGGATGCCTGTCTATCAATGGCGCTCGGGAGTGACGAGAGCTTACAAAACAAGCTTTCTGATTTGGTAGACCGCCCAAACGCGTTCAATTTCAGTTGGAACTACGCCATATTTTGGCAAATTTCGCAGTCAAAATCCGGCGACTGGGTTTTGGGATGGGGGGATGGGTGCTGCAGAGAACCAAGAGAAGTTGAAGAGTCTGAAGCTTCGAGAATTCTCAGTCTTCGCGTAGGAGATCAAACGCAGCAGAAAATGAGGAAGATTGTCCTTCAGAAACTCCATACATTGTTCGGAGGATCCGATGAAGATAACTACGTTCGTGGATTAGATAGAGTAACTGATACAGAAATGTTCTTCCTCGCTTCTATGTACTTCTCTTTTCCTCCAGGAGAAGGCGGGCCTGGTAAGTGTTTTGCCGAAGCAAAACCCGTATGGGTCGTCGATTTGCTCCAAACTCAATCGGATTACTGTGTTCGATCATTTTTAGCTAAATCAGCCAGAATCAGAACCGTTGTTTTAGTACCCACTGATGTTGGAGTAGTCGAAATTGGTTCTGTGAGATCTGTTTCTGAGAGCTTAAATTTGGTCGATTCAATCAGATCCTTATTTTCCTCGCAGCCTTGTTATTTGGACGGATTGAAAGTGCCATTTCCGACGAGCGAGAAGAAAGGGGAAAGTCCCCACTTCAGAGAAGGGGTTTCTAAGATTTTTGGGCTGGATTTGAATTTTGTGGAAACGGGTCGATCCAATTTCAGAGAGGAGCTTGCAATTAGAAAGATGGAAGATTGTAGTGATGGAGGAAGAATTGCATTTCAAAGCCACCCTCAAAGTGGGATGCATACTTCCAGGTTGGGTAATCATGGCCTGAAACGAGGAAGCTCCGGCGAAATTTACGTTTCCCCAAGATTAAACACTACACAGCCAGAGCTTGTCAATGGCGGCAGAGAAGAGTTTCGGGTCTGCAACAATAAACCGCAAATGAAGATTGATATTTCAGGGGCAACTTCATGGGCTTCTTTGATTTCAAGAGTTAGTGAAGAATCTGAGCCTTCAAATGTAAAACCTTCCTGCAAAGAGGACAGACCGATAAGCATAGCAGACGAAAAGAGGCCGAGAAAGCGAGGGAGAAAGCCTGCAAACGGGCGGGAAGAGCCACTCAACCATGTCGAAGCAGAGAGACAGCGGAGAGAGAAACTCAACCAGAGATTCTACGTCTTACGAGCCGTCGTCCCGAACATCTCCAAAATGGACAAAGCCTCTTTGTTAGGGGACGCCGTTGCTTACATAAACGAGCTTCAAGCTAAGATCAAAAGCATGAAATTGGGCAACACTTCGAACCCAAATGCAGAAAACCAAAACCCAGTTTCTCAGCTGGATATTGAATCTTCGACCGATGAGATAATTATAAGATTGAGCTCCCCGCTGGAGTTACATCCCGCCTTCAAACTCATTCAAGCATTTAAACAGTCGCAGGTAACTATGATAGACTCGAAACTCTCTGCATCAGAAGATACAGTGTTCCATAGTTTTGTGCTCAAATCTCAAGGATCTGAGCAGCTCACTAAAGAAACGTTAATGGCTGCTCTTAGTCGTTCCCCATGA | 1737 | 45.77 | MPFTRLMELKMEDGLGGGGWNEEAKSIVDVVLSRQAFDYLISSSCSDACLSMALGSDESLQNKLSDLVDRPNAFNFSWNYAIFWQISQSKSGDWVLGWGDGCCREPREVEESEASRILSLRVGDQTQQKMRKIVLQKLHTLFGGSDEDNYVRGLDRVTDTEMFFLASMYFSFPPGEGGPGKCFAEAKPVWVVDLLQTQSDYCVRSFLAKSARIRTVVLVPTDVGVVEIGSVRSVSESLNLVDSIRSLFSSQPCYLDGLKVPFPTSEKKGESPHFREGVSKIFGLDLNFVETGRSNFREELAIRKMEDCSDGGRIAFQSHPQSGMHTSRLGNHGLKRGSSGEIYVSPRLNTTQPELVNGGREEFRVCNNKPQMKIDISGATSWASLISRVSEESEPSNVKPSCKEDRPISIADEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYVLRAVVPNISKMDKASLLGDAVAYINELQAKIKSMKLGNTSNPNAENQNPVSQLDIESSTDEIIIRLSSPLELHPAFKLIQAFKQSQVTMIDSKLSASEDTVFHSFVLKSQGSEQLTKETLMAALSRSP | 578 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3288369 | 3290105 | + | BLOR10052 | Blo02g00322 | 56552 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo02g00322 | 578 | Gene3D | - | 421 | 491 | IPR036638 | GO:0046983 | |
Blo02g00322 | 578 | Pfam | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 60 | 248 | IPR025610 | - | |
Blo02g00322 | 578 | MobiDBLite | consensus disorder prediction | 393 | 439 | - | - | |
Blo02g00322 | 578 | SMART | finulus | 434 | 483 | IPR011598 | GO:0046983 | |
Blo02g00322 | 578 | MobiDBLite | consensus disorder prediction | 397 | 439 | - | - | |
Blo02g00322 | 578 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 428 | 477 | IPR011598 | GO:0046983 | |
Blo02g00322 | 578 | Pfam | Helix-loop-helix DNA-binding domain | 432 | 478 | IPR011598 | GO:0046983 | |
Blo02g00322 | 578 | PANTHER | MYC | 19 | 576 | IPR045084 | GO:0003700|GO:0006355 | |
Blo02g00322 | 578 | PANTHER | TRANSCRIPTION FACTOR MTB1 | 19 | 576 | - | - | |
Blo02g00322 | 578 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 427 | 488 | IPR036638 | GO:0046983 | |
Blo02g00322 | 578 | MobiDBLite | consensus disorder prediction | 317 | 341 | - | - | |
Blo02g00322 | 578 | CDD | bHLH_AtAIB_like | 425 | 496 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo02g00322 | Blo12g00220 | CCT | |
Blo02g00322 | Blo16g00474 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo02g00322 | Blo-Chr2:3288369 | Blo16g00475 | Blo-Chr16:18791477 | 0 | dispersed | |
Blo02g00322 | Blo-Chr2:3288369 | Blo02g00323 | Blo-Chr2:3293052 | 0 | tandem | |
Blo12g00220 | Blo-Chr12:14407904 | Blo02g00322 | Blo-Chr2:3288369 | 2.96E-180 | wgd | |
Blo16g00474 | Blo-Chr16:18744818 | Blo02g00322 | Blo-Chr2:3288369 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12005 | PF14215 | bHLH-MYC_N | 1.50E-52 | CL0161 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo02g00322 | - | - | tcc:18613964 | 718.383 |