Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00322 ATGCCCTTTACCCGACTAATGGAGTTGAAGATGGAGGACGGTTTGGGCGGCGGCGGGTGGAATGAGGAGGCAAAGAGCATAGTGGATGTAGTCCTGAGTCGTCAAGCCTTCGACTACTTGATATCGAGTTCGTGTTCGGATGCCTGTCTATCAATGGCGCTCGGGAGTGACGAGAGCTTACAAAACAAGCTTTCTGATTTGGTAGACCGCCCAAACGCGTTCAATTTCAGTTGGAACTACGCCATATTTTGGCAAATTTCGCAGTCAAAATCCGGCGACTGGGTTTTGGGATGGGGGGATGGGTGCTGCAGAGAACCAAGAGAAGTTGAAGAGTCTGAAGCTTCGAGAATTCTCAGTCTTCGCGTAGGAGATCAAACGCAGCAGAAAATGAGGAAGATTGTCCTTCAGAAACTCCATACATTGTTCGGAGGATCCGATGAAGATAACTACGTTCGTGGATTAGATAGAGTAACTGATACAGAAATGTTCTTCCTCGCTTCTATGTACTTCTCTTTTCCTCCAGGAGAAGGCGGGCCTGGTAAGTGTTTTGCCGAAGCAAAACCCGTATGGGTCGTCGATTTGCTCCAAACTCAATCGGATTACTGTGTTCGATCATTTTTAGCTAAATCAGCCAGAATCAGAACCGTTGTTTTAGTACCCACTGATGTTGGAGTAGTCGAAATTGGTTCTGTGAGATCTGTTTCTGAGAGCTTAAATTTGGTCGATTCAATCAGATCCTTATTTTCCTCGCAGCCTTGTTATTTGGACGGATTGAAAGTGCCATTTCCGACGAGCGAGAAGAAAGGGGAAAGTCCCCACTTCAGAGAAGGGGTTTCTAAGATTTTTGGGCTGGATTTGAATTTTGTGGAAACGGGTCGATCCAATTTCAGAGAGGAGCTTGCAATTAGAAAGATGGAAGATTGTAGTGATGGAGGAAGAATTGCATTTCAAAGCCACCCTCAAAGTGGGATGCATACTTCCAGGTTGGGTAATCATGGCCTGAAACGAGGAAGCTCCGGCGAAATTTACGTTTCCCCAAGATTAAACACTACACAGCCAGAGCTTGTCAATGGCGGCAGAGAAGAGTTTCGGGTCTGCAACAATAAACCGCAAATGAAGATTGATATTTCAGGGGCAACTTCATGGGCTTCTTTGATTTCAAGAGTTAGTGAAGAATCTGAGCCTTCAAATGTAAAACCTTCCTGCAAAGAGGACAGACCGATAAGCATAGCAGACGAAAAGAGGCCGAGAAAGCGAGGGAGAAAGCCTGCAAACGGGCGGGAAGAGCCACTCAACCATGTCGAAGCAGAGAGACAGCGGAGAGAGAAACTCAACCAGAGATTCTACGTCTTACGAGCCGTCGTCCCGAACATCTCCAAAATGGACAAAGCCTCTTTGTTAGGGGACGCCGTTGCTTACATAAACGAGCTTCAAGCTAAGATCAAAAGCATGAAATTGGGCAACACTTCGAACCCAAATGCAGAAAACCAAAACCCAGTTTCTCAGCTGGATATTGAATCTTCGACCGATGAGATAATTATAAGATTGAGCTCCCCGCTGGAGTTACATCCCGCCTTCAAACTCATTCAAGCATTTAAACAGTCGCAGGTAACTATGATAGACTCGAAACTCTCTGCATCAGAAGATACAGTGTTCCATAGTTTTGTGCTCAAATCTCAAGGATCTGAGCAGCTCACTAAAGAAACGTTAATGGCTGCTCTTAGTCGTTCCCCATGA 1737 45.77 MPFTRLMELKMEDGLGGGGWNEEAKSIVDVVLSRQAFDYLISSSCSDACLSMALGSDESLQNKLSDLVDRPNAFNFSWNYAIFWQISQSKSGDWVLGWGDGCCREPREVEESEASRILSLRVGDQTQQKMRKIVLQKLHTLFGGSDEDNYVRGLDRVTDTEMFFLASMYFSFPPGEGGPGKCFAEAKPVWVVDLLQTQSDYCVRSFLAKSARIRTVVLVPTDVGVVEIGSVRSVSESLNLVDSIRSLFSSQPCYLDGLKVPFPTSEKKGESPHFREGVSKIFGLDLNFVETGRSNFREELAIRKMEDCSDGGRIAFQSHPQSGMHTSRLGNHGLKRGSSGEIYVSPRLNTTQPELVNGGREEFRVCNNKPQMKIDISGATSWASLISRVSEESEPSNVKPSCKEDRPISIADEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYVLRAVVPNISKMDKASLLGDAVAYINELQAKIKSMKLGNTSNPNAENQNPVSQLDIESSTDEIIIRLSSPLELHPAFKLIQAFKQSQVTMIDSKLSASEDTVFHSFVLKSQGSEQLTKETLMAALSRSP 578
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3288369 3290105 + BLOR10052 Blo02g00322 56552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00322 578 Gene3D - 421 491 IPR036638 GO:0046983
Blo02g00322 578 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 60 248 IPR025610 -
Blo02g00322 578 MobiDBLite consensus disorder prediction 393 439 - -
Blo02g00322 578 SMART finulus 434 483 IPR011598 GO:0046983
Blo02g00322 578 MobiDBLite consensus disorder prediction 397 439 - -
Blo02g00322 578 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 428 477 IPR011598 GO:0046983
Blo02g00322 578 Pfam Helix-loop-helix DNA-binding domain 432 478 IPR011598 GO:0046983
Blo02g00322 578 PANTHER MYC 19 576 IPR045084 GO:0003700|GO:0006355
Blo02g00322 578 PANTHER TRANSCRIPTION FACTOR MTB1 19 576 - -
Blo02g00322 578 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 427 488 IPR036638 GO:0046983
Blo02g00322 578 MobiDBLite consensus disorder prediction 317 341 - -
Blo02g00322 578 CDD bHLH_AtAIB_like 425 496 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g00322 Blo12g00220 CCT
Blo02g00322 Blo16g00474 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00322 Blo-Chr2:3288369 Blo16g00475 Blo-Chr16:18791477 0 dispersed
Blo02g00322 Blo-Chr2:3288369 Blo02g00323 Blo-Chr2:3293052 0 tandem
Blo12g00220 Blo-Chr12:14407904 Blo02g00322 Blo-Chr2:3288369 2.96E-180 wgd
Blo16g00474 Blo-Chr16:18744818 Blo02g00322 Blo-Chr2:3288369 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12005 PF14215 bHLH-MYC_N 1.50E-52 CL0161 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00322 - - tcc:18613964 718.383