Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00349 ATGGAAGACGACTGGGATCTTCACGCCGTTGTCAGAGGCTGTAACGCCTCAACCATGAGATCTATTTCTTTTTCTTCTTCTTCTTCCTCTGCCCCGTTGACTTCTCAAGCTTTTGCATCAGATTCTCCTAGCTCTTGCTTTTCCGTTTTTAGTGGAGAGAATAATGGCCGTTTTTTCTCTATTCAAGATCCATTTGAAGGAAGAAATAATGACGAAGAGTTGCATGAGCTTTACAAGCCTTTCTTTCTCAACTCTCCGTCGTCTGAGCGCCCTCGGCCGCTTTCTTCGCCGGTGACAGCAGTCTCTCCGTTTTCTTTCCATGTAGCGTCGAAAGCTCAAACCCATCAAAAGCAGAGTCATGGAGGGTCTGTGACCACCCCTCGAACTAAAAGAAGAAAGAATCAGATGAAGAAAGTTTGCCAAGTTGCATCAGAGAGTCTTTCTTCAGATATATGGGCATGGCGTAAATATGGACAGAAACCCATTAAAGGTTCTCCATATCCAAGGGGGTATTACAGATGTAGCAGCTCAAAAGGGTGTTTAGCCCGAAAACAAGTGGAGCGGAACAGATCCGACCCGGGAATGTTCATCGTCACCCACACTGCGGAACATAACCACCCTGCTCCAACGCACCGAAACTCGCTCGCCGGTTCTACCCGTCAGAAGCCTGGATCATCACCCGAACCGAATAAAATCGAATCTGGAGTGCCCGATTGCTCCTCATCGCCGTCTTCAGAAGACGGTGGCGCACCTCCGAGTACCACGGCGGAAAGCAAAGAAGAGAACGAGGATTTGGTGGAAAACAATTTCGGGGTGTCGGAGATGGTCTTTGACGACGATTTCGTCGTGCGTTTCGAGGAACTCGACAGCCCGGCAACCGGAGACTACTTTTACGATGACTTTCCAGCAAACTTTGGCTCACCCGATGGTCTCAAAAAACAGTGA 945 48.68 MEDDWDLHAVVRGCNASTMRSISFSSSSSSAPLTSQAFASDSPSSCFSVFSGENNGRFFSIQDPFEGRNNDEELHELYKPFFLNSPSSERPRPLSSPVTAVSPFSFHVASKAQTHQKQSHGGSVTTPRTKRRKNQMKKVCQVASESLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPGMFIVTHTAEHNHPAPTHRNSLAGSTRQKPGSSPEPNKIESGVPDCSSSPSSEDGGAPPSTTAESKEENEDLVENNFGVSEMVFDDDFVVRFEELDSPATGDYFYDDFPANFGSPDGLKKQ 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3682413 3683654 - BLOR10079 Blo02g00349 56579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00349 314 MobiDBLite consensus disorder prediction 211 228 - -
Blo02g00349 314 SMART WRKY_cls 148 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo02g00349 314 MobiDBLite consensus disorder prediction 292 314 - -
Blo02g00349 314 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 290 - -
Blo02g00349 314 MobiDBLite consensus disorder prediction 235 256 - -
Blo02g00349 314 MobiDBLite consensus disorder prediction 109 139 - -
Blo02g00349 314 SUPERFAMILY WRKY DNA-binding domain 144 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo02g00349 314 Gene3D WRKY domain 132 202 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo02g00349 314 MobiDBLite consensus disorder prediction 202 271 - -
Blo02g00349 314 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 290 IPR044810 GO:0003700
Blo02g00349 314 MobiDBLite consensus disorder prediction 23 45 - -
Blo02g00349 314 ProSiteProfiles WRKY domain profile. 143 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo02g00349 314 MobiDBLite consensus disorder prediction 109 125 - -
Blo02g00349 314 Pfam WRKY DNA -binding domain 150 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g00349 Blo12g00237 CCT
Blo02g00349 Blo12g00237 ECH
Blo02g00349 Blo16g00443 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00349 Blo-Chr2:3682413 Blo09g00055 Blo-Chr9:922230 2.37E-48 dispersed
Blo16g00826 Blo-Chr16:34631010 Blo02g00349 Blo-Chr2:3682413 2.48E-26 dispersed
Blo12g00237 Blo-Chr12:15143673 Blo02g00349 Blo-Chr2:3682413 2.17E-91 wgd
Blo16g00443 Blo-Chr16:17611158 Blo02g00349 Blo-Chr2:3682413 2.75E-169 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12008 PF03106 WRKY 2.00E-23 CL0274 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00349 K13425 - csv:101217082 325.094