Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00353 ATGGATCGGAGGGACCCTTTGGCGTTATCCGGATCACAATCATTCTATATGCAGAGGGGAATGGCTGGTTCTGTCTCAAAGCCTCATTCTGGATTGCAAGGTCCTCAAGTCCTTAGATCGATAACGGGCCAAACTGCACATATTCAATCCCATGTTGGAGGAAACACCATTGGATCGACATTACAAGTTGAACCTTCCCACTCAATTTCCCATCGTATTGTCAATTTGGGTGCACAATCAGTGATGGCATCAGCCGAGCCGATGAAAAGAAAGCGGGGGAGGCCTCGGAAGTATGGACCGGATGGCAATGTCTCATTGGCTCTGTCCCCATCGGCATCGTCCAATCCTGGAATGGCATCGCCTCTCGTAAAGCGAGGAAGAGGTCGACCTCCTGGAACGGGGAGGAAACAACAATTAGCTTCTCTTGGCGAATGGCTTTCTGGTAGTGCTGGGGTTGGTTTCACTCCCCATATTATCTCTATTGGAGTAGGAGAAGACATTGCTGCAAAAATTGTATCATTTTCCCAGCAGCGGCCGAGAGCGATATGTATCTTATCGGCCAATGGTGCTGTTTCCACTGTGACTCTTCAGCAGCCTTCGACTTCTGGTGGCACTGTCACATATGAGGGACGGTTTGAGATAGTATGTTTGTCGGGGTCGTACATACTCGACGACAGCACTGGATCACGGAGCCGAATCGGCAGCTTGAGTGTCTCCCTTGCCAGTCCTGATGGGCATGTGCTTGGTGGGAGAGTTGGTGGAGTTCTTATTGCTGCAACCCCTGTTCAGGTGATTCTGGGAAGCTTCATATGGGGTGGATCGAGAACGAAGAACAAAAGAAGGGAAGCTTTAGAAGGCGTGATAGACTCCGACCAACAGACAGCGGAGAATACCACTGGGGCTGCATTGAATAGTGTCTCCCTCAGCCCAGCCTCCTCCCCCATCGGACTTTGGCCAACTCCTCAGCCGGTGGACTTGCGTAGCTCCCACATCGACATTGACTTAATGAGAGGATGA 1017 50.93 MDRRDPLALSGSQSFYMQRGMAGSVSKPHSGLQGPQVLRSITGQTAHIQSHVGGNTIGSTLQVEPSHSISHRIVNLGAQSVMASAEPMKRKRGRPRKYGPDGNVSLALSPSASSNPGMASPLVKRGRGRPPGTGRKQQLASLGEWLSGSAGVGFTPHIISIGVGEDIAAKIVSFSQQRPRAICILSANGAVSTVTLQQPSTSGGTVTYEGRFEIVCLSGSYILDDSTGSRSRIGSLSVSLASPDGHVLGGRVGGVLIAATPVQVILGSFIWGGSRTKNKRREALEGVIDSDQQTAENTTGAALNSVSLSPASSPIGLWPTPQPVDLRSSHIDIDLMRG 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3792539 3794395 - BLOR10083 Blo02g00353 56583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00353 338 CDD DUF296 155 269 IPR005175 -
Blo02g00353 338 Gene3D - 156 289 - -
Blo02g00353 338 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 49 297 IPR039605 GO:0003680
Blo02g00353 338 SUPERFAMILY AF0104/ALDC/Ptd012-like 154 271 - -
Blo02g00353 338 SMART AT_hook_2 124 136 IPR017956 GO:0003677
Blo02g00353 338 SMART AT_hook_2 89 101 IPR017956 GO:0003677
Blo02g00353 338 Pfam Plants and Prokaryotes Conserved (PCC) domain 156 269 IPR005175 -
Blo02g00353 338 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 49 297 - -
Blo02g00353 338 MobiDBLite consensus disorder prediction 82 138 - -
Blo02g00353 338 ProSiteProfiles PPC domain profile profile. 150 291 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00353 Blo-Chr2:3792539 Blo03g00211 Blo-Chr3:4867311 4.04E-87 dispersed
Blo16g00434 Blo-Chr16:17141839 Blo02g00353 Blo-Chr2:3792539 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00353 - - rcu:8261862 416.387