Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00373 ATGAGTTTTGGGGGTTTCCTCGATAATCCTCACGGTTCTGGTGGCGGTGGTACAAGAATCGTCGCCGATTTGCCTTTTGCCACCAGCAACGGCGAAACAGCCATTAATATGGCTTCAACCACAATTGCTCAGCCTCGCCTTCTTTCTCAGACTCTAACGAAATCCATTTTCAACTCTTCTGGCCTCTCTTTAGCTCTTACTGACATTGATGGGCAAGGAGATATGGCTGCTAGATTGGCTGAGACTTTAGAGCCTAATCTTGGCAGAAGAAGCAGAGATGAAGAGCACGAGAGCAGATCTGGCAGCGATAACGTCGATGGTGGTTCCGGCGACGATTTAGACGCCGCCGATAATCGGCCGAGGAAGAAGAGATATCACCGACACACTCCGCAGCAAATCCAAGAACTAGAAGCTCTGTTTAAGGAGTGTCCTCATCCTGATGAGAAACAAAGATTGGAGCTTAGTAGAAGGCTTTCATTGGAAACCAGACAAGTCAAATTCTGGTTTCAGAATCGTCGAACGCAAATGAAGACTCAATTGGAACGCCATGAAAATACCTTGTTGAGGCAGGAAAACGATAAGCTAAGAGCGGAAAACATGTCCATCCGAGATGCCATGAGAAATCCGATGTGCTCAAACTGTGGCGGCCCTGCAATCATTGGTGAAATCTCGTTGGAAGAGCAGCATCTGAGGATTGAGAATGCACGGTTGAAGGACGAGCTAGACCGTGTCTGTGCACTCGCCGGAAAGTTTCTGGGTCGCCCCATTCCGTCTTTGACTTCTTCCATTGCACCTCCCTTGCCAAGCTCAAGCTTAGAGCTCGGAGTTGGGAGCAATATTGGGTATGGTGGCTTGAGCACTGTGTCTACGACCATGGCCATGGGGCAAGAATTTGGAGGTGGGATTTCCAGCAACTTACCAATCATGCCGCCGAGAACATCTGGTGGTTTAACGGGGCTCGACAGGTCGGTGGAGAGGTCCATGTTTCTCGAGCTCACTTTGGCAGCCATGGACGAACTGGTTAAGATGGCACAGACCGAAGAACCTCTCTGGATTAGAAGCTCGGAAGGAGGAAGAGAATTGTCGTTAAACCACGAAGAGTACATTAGAGCTTTCACTCCTTGCATCGGATTAAAACCCAACGGGTTCGTCACCGAAGCATCGAAAGAAACTGGAATGGTTATAATCAACAGCTTGGCTCTAGTTGAGACGATGATGGATTCAGTTCGATGGGGGGAGATGTTTCCATGTATGATCGCAAGAACATCGACAATCGATGTCATATCGAGTGGTATGGGCGGAACAAGAAATGGCGTCCTTCAATTGCAAAAATTAGCCGATATATTAGCCATTGATTCTTATATGCACGCTGAGCTGCAAGTTCTTTCGCCATTGGTTCCCGTTAGGGAGGTAAACTTCATTCGCTTCTGCAAGCAGCTCGCAGAAGGAGTATGGGCAGTGGTCGACGTCTCCATTGACAGCCTGAGAGAAGCTCCTGCATTTTACAACTGCCGAAGGCTTCCTTCCGGCTTCATAGTTCAAGATATGCCAAATGGGTATTCCAAGGTTACGTGGGTGGAGCATGCAGAATACGATGAAAGCCAAGTTCACCTGCTCTACCGCCCCCTTCTTAGCTCCGGCATGGCCTTCGGCGCACGGCGGTGGGTGGCCACCCTCCAGCGCCAATGCGAGTGTCTTGCCATTCTCATCTCCTCCGCCAATCCCTCGCGCGATCTCGCTGCGATTACTTCTGGTGGCCGGAGAAGCATGCTGAAGCTGGCGCAGAGGATGACGGACAACTTCTGCGCCGGAGTTTGTGCTTCGACGGTGCACAAGTGGAACAAACTCAATGCCGGAAATGTGGACGAGGATGTTCGGGTGATGACCCGGAAGAGCGTGGATGATCCGGGAGAGCCGCCGGGGGTTGTGCTTAGCGCCGCCACCTCTGTCTGGCTCCCCGTTTCTCCTCAGAGACTGTTTGACTTTCTGCGCGATGAACGGCTGAGGAGCGAGTGGGATATTTTATCCAACGGTGGTCCGATGCAGGAGATGGCTCACATCGCCAAAGGCCAAGATCACGGCAACTGCGTCTCTCTCCTCCGAGCCAGCGCTATGAACGCAAACCAGAGCAGCATGCTGATCCTGCAGGAGACTTGCATAGATGCGGCTGGATCGCTGGTGGTGTACGCGCCAGTGGACATTCCGGCGATGCACGTGGTGATGAACGGCGGAGATTCTGCTTACGTGGCTCTACTCCCGTCCGGATTTGCGATCGTCCCCGATGGGCCCAGCACCCGCGGTGGGTCGACCACCGGCGGTAGTCCCAATGGCGGAGAGGGCCCACGCAGAGTGAGTGGGTCTCTTCTGACGGTGGCATTCCAGATTCTCGTGAATAGCTTGCCTACGGACAAGCTGACGGTAGAATCGGTGGAGACGGTCAACAATTTAATCTCCTGCACCGTTCAGAAGATCAAGGCCGCTCTTCAATGCGAAAGCTGA 2499 52.26 MSFGGFLDNPHGSGGGGTRIVADLPFATSNGETAINMASTTIAQPRLLSQTLTKSIFNSSGLSLALTDIDGQGDMAARLAETLEPNLGRRSRDEEHESRSGSDNVDGGSGDDLDAADNRPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLSLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIRDAMRNPMCSNCGGPAIIGEISLEEQHLRIENARLKDELDRVCALAGKFLGRPIPSLTSSIAPPLPSSSLELGVGSNIGYGGLSTVSTTMAMGQEFGGGISSNLPIMPPRTSGGLTGLDRSVERSMFLELTLAAMDELVKMAQTEEPLWIRSSEGGRELSLNHEEYIRAFTPCIGLKPNGFVTEASKETGMVIINSLALVETMMDSVRWGEMFPCMIARTSTIDVISSGMGGTRNGVLQLQKLADILAIDSYMHAELQVLSPLVPVREVNFIRFCKQLAEGVWAVVDVSIDSLREAPAFYNCRRLPSGFIVQDMPNGYSKVTWVEHAEYDESQVHLLYRPLLSSGMAFGARRWVATLQRQCECLAILISSANPSRDLAAITSGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGVVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNANQSSMLILQETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPSTRGGSTTGGSPNGGEGPRRVSGSLLTVAFQILVNSLPTDKLTVESVETVNNLISCTVQKIKAALQCES 832
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4133203 4137948 + BLOR10103 Blo02g00373 56603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00373 832 Coils Coil 173 205 - -
Blo02g00373 832 ProSitePatterns 'Homeobox' domain signature. 154 177 IPR017970 GO:0000981|GO:0006355
Blo02g00373 832 MobiDBLite consensus disorder prediction 82 129 - -
Blo02g00373 832 Pfam Homeodomain 122 177 IPR001356 GO:0003677
Blo02g00373 832 SUPERFAMILY Bet v1-like 593 825 - -
Blo02g00373 832 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 67 829 - -
Blo02g00373 832 Gene3D - 110 195 - -
Blo02g00373 832 SUPERFAMILY Homeodomain-like 106 179 IPR009057 -
Blo02g00373 832 MobiDBLite consensus disorder prediction 85 102 - -
Blo02g00373 832 CDD START_ArGLABRA2_like 326 564 - -
Blo02g00373 832 Pfam START domain 332 565 IPR002913 GO:0008289
Blo02g00373 832 CDD homeodomain 121 179 IPR001356 GO:0003677
Blo02g00373 832 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 67 829 IPR042160 -
Blo02g00373 832 SUPERFAMILY Bet v1-like 324 565 - -
Blo02g00373 832 SMART HOX_1 120 183 IPR001356 GO:0003677
Blo02g00373 832 ProSiteProfiles 'Homeobox' domain profile. 119 179 IPR001356 GO:0003677
Blo02g00373 832 SMART START_1 331 565 IPR002913 GO:0008289
Blo02g00373 832 MobiDBLite consensus disorder prediction 762 781 - -
Blo02g00373 832 ProSiteProfiles START domain profile. 322 568 IPR002913 GO:0008289
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00373 Blo-Chr2:4133203 Blo04g00662 Blo-Chr4:5933898 0 dispersed
Blo01g00007 Blo-Chr1:139402 Blo02g00373 Blo-Chr2:4133203 0 transposed
Blo07g00756 Blo-Chr7:24518597 Blo02g00373 Blo-Chr2:4133203 0 transposed
Blo10g00543 Blo-Chr10:14604274 Blo02g00373 Blo-Chr2:4133203 0 transposed
Blo16g00629 Blo-Chr16:25131110 Blo02g00373 Blo-Chr2:4133203 0 transposed
Blo02g00373 Blo-Chr2:4133203 Blo07g00421 Blo-Chr7:7981329 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12011 PF01852 START 1.40E-50 CL0209 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00373 K09338 - qsu:111991611 1285.78