Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00379 ATGTCAGTATACGATTCTGCATTTGTAAGTACGGAGCTCTCAAAGCCCACATCGATTTTTGGCCTCCGATTATGGGTGGTAATCGGAATTTTAATAGGCACCCTCATAGTCCTCGCTCTCTTCCTACTCTCTCTCTGTCTCACATCCCGAAAACGGAGCCGAAATCGAGGGCAAAATCACTTGCTTAAATCCGCCACCTCTCACTCAACTCCGGCGGTTTCCAAAGAGATCCAAGAAATTGTGCACCACGCCGCGCCAGATCACCACCATCCACAGCCAGAAATCCATGTCGAGCTCGGAAAAGTGGAGCACCGGGTGGTTTTCTCGGACAGGCCCTCTAGTGGTGAGAGCCGAGCCGGTGTTAGCGAAACTACTTCATTTGGATCCGGTACTGTCGGACCTGAGGTTTCGCACCTTGGTTGGGGTAGATGGTATACTCTGAGAGAGCTTGAGGCTGCAACTGATGGATTGTGTGAAGAAAATGTGGTTGGAGAAGGAGGATATGGGATAGTCTACAAGGGTGTTTTAGGGGATGGTACGAGAATTGCCGTCAAGAATCTTCTCAACAACAGGGGTCAAGCTGAGAAGGAATTTAAAGTGGAAGTCGAAGCAATTGGACGAGTGAGACATAAGAATCTTGTTAGGTTACTTGGATACTGCGTTGAGGGTGCATACAGAATGCTTGTTTATGAGTACGTAGACAATGGTAATCTAGATCAATGGCTTCATGGTGATGTTGGTGAGATCAGCCCCCTAACCTGGGATATTCGTGTGAACATTATCTTAGGAACAGCAAAAGGATTGGCCTACCTTCACGAAGGTCTTGAACCCAAAGTCGTTCATCGGGACGTAAAATCTAGCAACATTTTACTAGATCGCCAATGGCATCCTAAGGTGTCTGATTTTGGGCTTGCTAAGCTCCTATACTCTGAGAGAAGTTATGTGACAACTCGTGTGATGGGAACGTTTGGTTATGTTGCCCCTGAATATGCTTGCACTGGAATGCTGAATGAGAAGAGCGATATATATAGCTTTGGAATACTAATCATGGAAATAATTTCTGGACGGACTCCAGTTGATTACAATAGAGCTAAAGGAGAGATCAATTTGGTGGAGTGGTTAAAAACCATGGTTGGGAACCGAAAATCAGAAGAAGTAGTTGATCCCAAATTGCCTGAAATGCCTTCTTCAAAAGCACTTAAACGGTTTTTACTTGTTGCTCTTCGATGTGTTGATCCTGATGCCACAAAGAGGCCTAAAATGGGACATATTATACACATGCTTGAGGCAGATGACCTCCTATTTCGTGATGAACGGCGCTCTGGGAAAGAGTTGTCCCGCGCAATTATCAATCATCAACAAGAGAATCATGGCATTGGAGAAAATGAACGTGGAGGTGAAGGGCCATCTAATCCATCTGAACATAAAAATGGTGGAAACCTTAGTCAGCCAACTAGGTGGAGATAA 1467 45.26 MSVYDSAFVSTELSKPTSIFGLRLWVVIGILIGTLIVLALFLLSLCLTSRKRSRNRGQNHLLKSATSHSTPAVSKEIQEIVHHAAPDHHHPQPEIHVELGKVEHRVVFSDRPSSGESRAGVSETTSFGSGTVGPEVSHLGWGRWYTLRELEAATDGLCEENVVGEGGYGIVYKGVLGDGTRIAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLDQWLHGDVGEISPLTWDIRVNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWHPKVSDFGLAKLLYSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIISGRTPVDYNRAKGEINLVEWLKTMVGNRKSEEVVDPKLPEMPSSKALKRFLLVALRCVDPDATKRPKMGHIIHMLEADDLLFRDERRSGKELSRAIINHQQENHGIGENERGGEGPSNPSEHKNGGNLSQPTRWR 488
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4293998 4296588 + BLOR10109 Blo02g00379 56609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00379 488 MobiDBLite consensus disorder prediction 451 488 - -
Blo02g00379 488 SMART serkin_6 157 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo02g00379 488 CDD STKc_IRAK 163 429 - -
Blo02g00379 488 MobiDBLite consensus disorder prediction 110 129 - -
Blo02g00379 488 ProSiteProfiles Protein kinase domain profile. 157 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo02g00379 488 MobiDBLite consensus disorder prediction 473 488 - -
Blo02g00379 488 PANTHER OS01G0323000 PROTEIN 2 448 - -
Blo02g00379 488 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 448 - -
Blo02g00379 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 279 291 IPR008271 GO:0004672|GO:0006468
Blo02g00379 488 ProSitePatterns Protein kinases ATP-binding region signature. 163 185 IPR017441 GO:0005524
Blo02g00379 488 Pfam Protein kinase domain 160 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo02g00379 488 MobiDBLite consensus disorder prediction 115 129 - -
Blo02g00379 488 Gene3D Transferase(Phosphotransferase) domain 1 233 444 - -
Blo02g00379 488 SUPERFAMILY Protein kinase-like (PK-like) 136 429 IPR011009 -
Blo02g00379 488 Gene3D Phosphorylase Kinase; domain 1 139 232 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00379 Blo-Chr2:4293998 Blo13g00554 Blo-Chr13:27519862 2.03E-179 dispersed
Blo02g00379 Blo-Chr2:4293998 Blo17g00877 Blo-Chr17:28915243 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84141 PF00069 Pkinase 1.00E-46 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00379 - - csv:101219288 791.571