Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00382 ATGAAGGAAAAGGTCGACCGCACGGTCGACCGTACCATAGATATTTTCCCAACGGTCAAATTTCAACTTGAAGAATTGCAACGACTAGTTAAAAGGGTCGACCGTTTGGGCATAAGGTCGACCGTTTGCGCAGTGTCTATAAAAGTGGGATCACTCCAAGCTCTTCACAACCAACGAACTGAGAATCGTGGCGAAGCCCTGCCGAATTTAATACGTGATTCTAATCATTATTGGAACTCCGATACAAGGTCATATCTGGGGGGCATCGATGGGAATCAATCTCCGGCGACGGTGGACTGTGAGGAAGAACCTGGCGTTTCCTCTCCGAACAGTACGATTTCGAGCTTAAGCGGGAAGAGAAGAAAAAGGGAAGAAGTTTCAGACGATAACGACGGGAAGAGGGATTCCTGCTCTCCGGGAAGCGGCGAAGACGACGTCCCTGGCGGGGTAGTCGGAGGTGAATCACCAAGGAAGAAGCTGAGGCTTTCTAAGGAGCAGTCGATGCTGCTTGAAGAACGGTTCAAAGAGCAGAAGACTCTAAATCCGAAGCAAAAGCTAGAGCTGGCGAAGAAACTGAAACTGACGCTGAGACAGGTGGAGGTCTGGTTTCAGAACAGAAGAGCAAGGACGAAGCTGAAGCAAAAGGAGGTGGATTGTGAGTACATGAAGAAATGGTGTGAGAAACTGAAAAGGGAAAACAAGAGGTTAGAGAAGGAGATTTTGGAGCTAAGAGCACTTCACTTTCCTCCTCCCACCACTCTTCCTCTGTGTCCTCACTGCCCGCCCGTCAATCCCGGCCATTCGATCATCCCATGGACCCCTTTGCCGCTCCGACCATGA 840 49.88 MKEKVDRTVDRTIDIFPTVKFQLEELQRLVKRVDRLGIRSTVCAVSIKVGSLQALHNQRTENRGEALPNLIRDSNHYWNSDTRSYLGGIDGNQSPATVDCEEEPGVSSPNSTISSLSGKRRKREEVSDDNDGKRDSCSPGSGEDDVPGGVVGGESPRKKLRLSKEQSMLLEERFKEQKTLNPKQKLELAKKLKLTLRQVEVWFQNRRARTKLKQKEVDCEYMKKWCEKLKRENKRLEKEILELRALHFPPPTTLPLCPHCPPVNPGHSIIPWTPLPLRP 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4416399 4420809 + BLOR10112 Blo02g00382 56612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00382 279 MobiDBLite consensus disorder prediction 88 158 - -
Blo02g00382 279 ProSitePatterns 'Homeobox' domain signature. 188 211 IPR017970 GO:0000981|GO:0006355
Blo02g00382 279 SUPERFAMILY Homeodomain-like 137 215 IPR009057 -
Blo02g00382 279 SMART halz 213 256 IPR003106 GO:0006355|GO:0043565
Blo02g00382 279 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT3 69 263 - -
Blo02g00382 279 SMART HOX_1 155 217 IPR001356 GO:0003677
Blo02g00382 279 MobiDBLite consensus disorder prediction 117 140 - -
Blo02g00382 279 Coils Coil 219 246 - -
Blo02g00382 279 PANTHER - 69 263 - -
Blo02g00382 279 Pfam HD-ZIP protein N terminus 75 124 IPR006712 GO:0005634
Blo02g00382 279 CDD homeodomain 156 214 IPR001356 GO:0003677
Blo02g00382 279 Gene3D - 153 219 - -
Blo02g00382 279 ProSiteProfiles 'Homeobox' domain profile. 153 213 IPR001356 GO:0003677
Blo02g00382 279 Pfam Homeodomain 157 211 IPR001356 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00382 Blo-Chr2:4416399 Blo03g00148 Blo-Chr3:4015074 1.93E-64 dispersed
Blo02g00382 Blo-Chr2:4416399 Blo05g00182 Blo-Chr5:1733002 5.10E-45 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12013 PF00046 Homeodomain 2.70E-15 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00382 K09338 - pvy:116146403 211.46