Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00401 ATGGAAAAGGAGTTCTTCTTCAACGAAGGAGATTACACTTCCGCTCCCCAAACGACCTGGAATCAATCGCAACTTGGGAGCTGTCTTCACAACCAGAATTGGGAAATTTCGATGGATCAGAGCGATCCCTTTGAGTCTGCTTTGAGCTCGATTGTATCTTCTCCGGTAGCCTCCTCCGCCATAAACGGCGGCGGAGGAGAAAGTTTCATGATCAGAGAACTCATAGGAAGGCTCGGAAGCATCTGCAATTCCGGCGAGATTTCCCCGCACTCTTATATAGGAGGAAGTACTAATACTTCGTGTTACAATACTCCATTAAATTCCCCTCCGAAACTTAATCTATCAATGGCGGATCCGCAGGTCAGAGCGAATTTCCAGTTTTCAGGTCATCATTTGCCTTCCCATCCAAATATTTCTCCATTTTCATTGGACCCTGGGTTTGCAGAGAGAGCTGCGAGGTTTTCATGTTTTAATAACACCGGCAGCTCAAATGGGCAAATGGGTTTGAAGGAAGCTGAAATGGCAATTCGATCAATTTCTAGAGTTGATTCAAGTAAGTTCTCTAGAGTTTCTGGTAATCGATCGAAATCAGGGGGTCAAGAAGGCAGAGATGGGAATTCGATTCTGGAGAAGTTCAACTGGTTTACAACATCTTCAACTGCAGAAAATGCAGAACTAGGGGAAGGATCTACACTTACCGAGCAGAACCCAGGCGGGAAATTGAGTGTAAGAATCAAAGGAGAAAACAAATCAAGAAAAAGAAAATCAATTCCAAAAGGAGAAGCAAAAGAATCCAAGAGCAACAGACAGAATGAAACTTCTGGAAATGAAAAGGATGCTTCAAAGGTAAAGGCAGAACCCAGTGGAGATATAAAAGAGGAAGAAGATGGGAATCAGAAGCAGACAAAGCCTCCAGAACCTCCAAAAGATTACATCCATGTCAGAGCCAGAAGGGGCCAGGCAACTGATAGCCATAGCCTGGCTGAAAGAGTCAGAAGAGAGAAAATCAGCCAAAAAATGAAGTTCCTTCAGGATCTTGTTCCTGGCTGCAATGAGGTAACAGGGAAAGCAATGATGCTTGATGAAATTATAAGCTATGTCCAGTCGTTGCAGCGCCAAGTAGAACATCTTTCTATGAAATTGGTTACTATTAATCCTAGTATGGATGCAACAATGGATGGTCTTCTTCCACCATTTTCCTCTGGTTATAAATCTCTTCAATTGCAGACCATTAATGTTGGTGTTTCTTCCGGGACAGAGTTAAATCTTCCTATGAACTATCTGGATGGTGTGTTTAGAAGAAACAATCCTCAAGCTGGATATGGGGAATCTTCACACCAAGTTTCGGAATTCTGGGCAGATGACCTCCAAAGTGTAGTTCAAATGGGTTATGATCCGAATCAGCAAAAGCACTTTCATGGTGAGAAAAACTTCGTCTTGCTCTTAGCGAATATCTTCTAG 1461 42.92 MEKEFFFNEGDYTSAPQTTWNQSQLGSCLHNQNWEISMDQSDPFESALSSIVSSPVASSAINGGGGESFMIRELIGRLGSICNSGEISPHSYIGGSTNTSCYNTPLNSPPKLNLSMADPQVRANFQFSGHHLPSHPNISPFSLDPGFAERAARFSCFNNTGSSNGQMGLKEAEMAIRSISRVDSSKFSRVSGNRSKSGGQEGRDGNSILEKFNWFTTSSTAENAELGEGSTLTEQNPGGKLSVRIKGENKSRKRKSIPKGEAKESKSNRQNETSGNEKDASKVKAEPSGDIKEEEDGNQKQTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISQKMKFLQDLVPGCNEVTGKAMMLDEIISYVQSLQRQVEHLSMKLVTINPSMDATMDGLLPPFSSGYKSLQLQTINVGVSSGTELNLPMNYLDGVFRRNNPQAGYGESSHQVSEFWADDLQSVVQMGYDPNQQKHFHGEKNFVLLLANIF 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4969557 4971449 - BLOR10131 Blo02g00401 56631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00401 486 MobiDBLite consensus disorder prediction 254 310 - -
Blo02g00401 486 MobiDBLite consensus disorder prediction 222 310 - -
Blo02g00401 486 PANTHER TRANSCRIPTION FACTOR BHLH78-LIKE ISOFORM X1 270 398 - -
Blo02g00401 486 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 320 370 IPR011598 GO:0046983
Blo02g00401 486 MobiDBLite consensus disorder prediction 182 208 - -
Blo02g00401 486 MobiDBLite consensus disorder prediction 222 238 - -
Blo02g00401 486 Pfam Helix-loop-helix DNA-binding domain 324 371 IPR011598 GO:0046983
Blo02g00401 486 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 318 388 IPR036638 GO:0046983
Blo02g00401 486 SMART finulus 326 376 IPR011598 GO:0046983
Blo02g00401 486 Gene3D - 320 382 IPR036638 GO:0046983
Blo02g00401 486 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 270 398 IPR024097 GO:0006355
Blo02g00401 486 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 27 265 IPR024097 GO:0006355
Blo02g00401 486 MobiDBLite consensus disorder prediction 182 202 - -
Blo02g00401 486 CDD bHLH_AtBPE_like 310 395 - -
Blo02g00401 486 PANTHER TRANSCRIPTION FACTOR BHLH78-LIKE ISOFORM X1 27 265 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00401 Blo-Chr2:4969557 Blo06g00398 Blo-Chr6:23064680 2.79E-70 dispersed
Blo12g00154 Blo-Chr12:10470222 Blo02g00401 Blo-Chr2:4969557 4.76E-95 wgd
Blo02g00401 Blo-Chr2:4969557 Blo07g00067 Blo-Chr7:975466 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12016 PF00010 HLH 4.90E-06 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00401 - - qsu:112039101 476.478