Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00407 ATGAGAGAGGAGAAAGGGCAACGGTCTTCTTCTCCCGATCGAGATTTCTTCTTCTCTTCTTCACTGTCTTCTTCGCGGCGAGAGAGAAAGGGCTCCGCAACGAAGCTGGGCATCGACGGTCTCCCTCATTCTTCTCCAGACGAAGTCCTCCAGTCCTCCGGCTCCAGACGGTCGCCAGTGGAGTTCTCCGGCTTCAACGCAAAATTGCCGAGAAACCACGTTCAGTCTGGAGAAGAATTGCCGATCTGGAGAAGAATCGCCGAGAACCTGCATTCGTTCTGGAGAAGAATCACCCGCCTCCGTTCGGTCTGGAGAAGAATCGCCGGCCTCCGTTCCGTCTCTGCGTTCGCCACTTTGCGGAATCGCGGATTCATGCAGAGGAGTCGGGGGAGTTGGGGACCGGCGACCGCCAGGCTCGCAAGCCAGCCCGCTGGCCCGGCTCGTGAGCCCGGGCTCGGCGGGCTCGCGAGCTCGGGGTTTCTGGCTGGGCTGGGGGGGCCACTACCTACTACAACAGACGACGAAGAAGACTGCATTTTAGGAGAGATAATCAAACAGAATTATTGGAGTGTTCTTTGTGTCTTTGGAGACATGAAGAAAAAAGTAGAGAAAATGGTGTTTCTGTTTACTGCTTTTTCATTTTTAGCCGTGATGCGGAGTGCAGAAAGATGGACGATAAAGCCTGACTGTCAAGATAGTTGTGGAACAGTTCAGATTCCGTACCCGTTTGGAATCGGCTTTGGTTGCTACCTGAATACAGGATTCGCCGTTTCTTGCAAACAATCAGGAAATGATCCTGCACCGAAGCTTTTCATGACCATGAAGAATTTGGAGAATTTGGAAATTCTTGAAATATTCGCCAATCGAAGTAGTTTCCGAGTCAATAGTCCAGTGGTTTTCTCCAATTGCGAGAAGAAGAACGACAGTGAAACAGTCATGAACCTCGATCGTACCCCCTTTTGGTTATCGAACGAAGAGAATCAGTTCACCGCCATGGGATGCGACAATCTGGCTCTTCTCACAGGCCATGGCACAACGTACGGCGGTTGCCTCTCCATCTGTCCCAAGGACCTGGGCCTCAAGGATTCGACGAAGAAAGGAACAAACCTCCCAACATGCAACGGCATAAACTGCTGCCAAACTTCGATTCCAGCGTTTATGAGTAGCATCGGTGTGTGGATGCGGAGCACAAATACGACGGGAGGGAATCTCAATTCGACATGCAGGTATTCTTTCATGGCGGAAAAGGCGTGGTTCGACATAAACAACGTCAATCCTTTAGTCAACAACACTGATTTCGTTCCTGTGATCCTGCTTTGGGGAGTGGGAGATAATTGCACAGATGCAGATTGCGGAAGAAACGCTCGATGTTCGACGGTGGTTGGAGTTCCTCGGGGCTACAAGGAAGCTTATGTGTCCGTCTGTAAATGTGAAGAAGGATACGAAGGAAACCCTTACCTTCCTCACGAAATAAATTACTGCAGCCAAAACAATAACCCTTGCACCCAGAGTATGTGCCGGTCAAGACCATCCGGCGCAATTTGCATTCCTTGTATCGACGGCTACACCTTCTACGACAACCACTGTTATCCTCCTGGCCGAACATACGGAGTACTCATCATAGGTTGCAGTGGTGCATTTGGAGGGATATTTCTTGTGATATTTTCATGGTGGTTGTACAGACTACTGCAAAGAAGAAGGATGAAGAAACAAAAACAGATTTTCTTCAAAAGAAATGGGGGCTTATTGCTTCAACAACTCTCTGCAACTGAGACCGGCTTCGAAAAATCGAGAATATTTTCTGCAGAAGAGCTGACGAAGGCCACAGATCAATACAATGAGAATAGAATTCTAGGGAGGGGAGGCCAAGGCACCGTCTTCAAAGGGATGATGACAGACGGACGGATCGTGGCCGTTAAAAAGTCGAAGATCAAAAACAACAACCTCCTCAAGCAGTTCATCAACGAGGTTGTCATCTTGTCTCAAATCAACCACAGGAATGTCGTCAAGCTATTAGGGTTTTGTTTGGAAAGCGAAGTTCCTCTTCTTGTCTACGAGTTCATTCAGAATGGAACTCTATTCCAGCATTTGCACGAGCCAAACGAGGACTTCCCTTTTATGTGGGACATGCGATTGAGAATCGCAGTCGAAATCGCATCTGCTCTTTCGTACCTGCACTCGGCCGCCTCAATCCCGATATATCACCGAGATATCAAGTCGACGAACATTCTTCTAGATGAAAAATACGTCGCGAAAGTTTCGGATTTCGGAGCGTCGAAGTCGTTCGCAGTTGATCAAACCCACATGACGACTAAAGTACAAGGAACTTTCGGGTATCTAGATCCCGAATACTTCCAATCAAATCAGTTCACAGAAAAAAGCGATGTATACAGTTTCGGTGTTGTTTTGGTCGAGCTTCTAACAGGGCAGAAGCCAATATCATCGACGAGATCCGAAGAAGAAATGAACTTATCTGCAATGTTCTTAAATCTAATGAAGGAGGATCGTCTTAAGGAGATTCTCGATCCTAGAATATCGCAAGAAGGGAAGGAAGAAGCGATATTGTCGGTGGGGAAGCTTGCGAAAAGGTGTCTGAATTTGAATGGGAAGAAGAGGCCAACGATGAAAGAAGTTGCAGTCGAGTTGGAAATGATTAGATCTCAAATTTCAGTGGTTGAAAGAGAAGAAGTTGGCGATCAAATTGAGGTTGAAGACGAATATGAAAGATCAACAATAAGGCCTGAATGTCAAGATAGTTGTGGAACAGTTCAGATTCCGTACCCTTTTGGAATCGACCCTGATTGCTACTTGGATAAAAGATTCGCCGTTTCTTGCAACAGATCAGGAAATGATCCTGCTCCGAAGCTCTTCATGACCAGCATGAACATGAATTTGGAAATTCTTGAAATATTGGCCAATCAAAGTAGTTTCCGGGTCAATTATCCAGTGGTTTTCTCCAATTGCGGGAAGAAGAACAACAGTGAAACAGTCATGGACCTCGTTGGTACCTCCTTTTCGTTATCGGACGAAGAGAATCAGTTCACCGCCATGGGATGCGACAATCTGGCTCTTCTCAAAGAACAAAACACAATCTACGGCGAAAGGAAGGAAGAAGCAATTTTGTCAGTGGGGAAGCTTGCGAAAAGGTGTCTAAACTTGAGTGGGAAGAAAAGACCAACGATGAAAGAAGTCGTATCGGAGTTGGAACGTATTAAATCTCAAATTGCAGTGGTTGAAAGAGGAGAAGATGGTGATCAGATTGAGGTTGAAGATGAATATTGTGCTGTTGAAATAGCCACGGAATGCAAGGAAGGAAACTTGGCAAACCTCCATTTCAGCACATTCTGA 3348 46.68 MREEKGQRSSSPDRDFFFSSSLSSSRRERKGSATKLGIDGLPHSSPDEVLQSSGSRRSPVEFSGFNAKLPRNHVQSGEELPIWRRIAENLHSFWRRITRLRSVWRRIAGLRSVSAFATLRNRGFMQRSRGSWGPATARLASQPAGPAREPGLGGLASSGFLAGLGGPLPTTTDDEEDCILGEIIKQNYWSVLCVFGDMKKKVEKMVFLFTAFSFLAVMRSAERWTIKPDCQDSCGTVQIPYPFGIGFGCYLNTGFAVSCKQSGNDPAPKLFMTMKNLENLEILEIFANRSSFRVNSPVVFSNCEKKNDSETVMNLDRTPFWLSNEENQFTAMGCDNLALLTGHGTTYGGCLSICPKDLGLKDSTKKGTNLPTCNGINCCQTSIPAFMSSIGVWMRSTNTTGGNLNSTCRYSFMAEKAWFDINNVNPLVNNTDFVPVILLWGVGDNCTDADCGRNARCSTVVGVPRGYKEAYVSVCKCEEGYEGNPYLPHEINYCSQNNNPCTQSMCRSRPSGAICIPCIDGYTFYDNHCYPPGRTYGVLIIGCSGAFGGIFLVIFSWWLYRLLQRRRMKKQKQIFFKRNGGLLLQQLSATETGFEKSRIFSAEELTKATDQYNENRILGRGGQGTVFKGMMTDGRIVAVKKSKIKNNNLLKQFINEVVILSQINHRNVVKLLGFCLESEVPLLVYEFIQNGTLFQHLHEPNEDFPFMWDMRLRIAVEIASALSYLHSAASIPIYHRDIKSTNILLDEKYVAKVSDFGASKSFAVDQTHMTTKVQGTFGYLDPEYFQSNQFTEKSDVYSFGVVLVELLTGQKPISSTRSEEEMNLSAMFLNLMKEDRLKEILDPRISQEGKEEAILSVGKLAKRCLNLNGKKRPTMKEVAVELEMIRSQISVVEREEVGDQIEVEDEYERSTIRPECQDSCGTVQIPYPFGIDPDCYLDKRFAVSCNRSGNDPAPKLFMTSMNMNLEILEILANQSSFRVNYPVVFSNCGKKNNSETVMDLVGTSFSLSDEENQFTAMGCDNLALLKEQNTIYGERKEEAILSVGKLAKRCLNLSGKKRPTMKEVVSELERIKSQIAVVERGEDGDQIEVEDEYCAVEIATECKEGNLANLHFSTF 1115
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5301206 5317543 + BLOR10137 Blo02g00407 56637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00407 1115 Gene3D Phosphorylase Kinase; domain 1 584 687 - -
Blo02g00407 1115 Pfam Wall-associated receptor kinase galacturonan-binding 230 295 IPR025287 GO:0030247
Blo02g00407 1115 Pfam Wall-associated receptor kinase galacturonan-binding 916 980 IPR025287 GO:0030247
Blo02g00407 1115 SMART serkin_6 612 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo02g00407 1115 MobiDBLite consensus disorder prediction 12 27 - -
Blo02g00407 1115 PANTHER PUTATIVE-RELATED 219 896 - -
Blo02g00407 1115 PANTHER PUTATIVE-RELATED 1034 1078 - -
Blo02g00407 1115 Gene3D Transferase(Phosphotransferase) domain 1 968 1093 - -
Blo02g00407 1115 Gene3D Transferase(Phosphotransferase) domain 1 688 909 - -
Blo02g00407 1115 MobiDBLite consensus disorder prediction 1 63 - -
Blo02g00407 1115 SUPERFAMILY Growth factor receptor domain 444 531 IPR009030 -
Blo02g00407 1115 ProSiteProfiles Protein kinase domain profile. 612 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo02g00407 1115 MobiDBLite consensus disorder prediction 46 60 - -
Blo02g00407 1115 ProSitePatterns Serine/Threonine protein kinases active-site signature. 733 745 IPR008271 GO:0004672|GO:0006468
Blo02g00407 1115 CDD STKc_IRAK 618 883 - -
Blo02g00407 1115 SUPERFAMILY Protein kinase-like (PK-like) 596 880 IPR011009 -
Blo02g00407 1115 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 219 896 IPR045274 GO:0007166
Blo02g00407 1115 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 1034 1078 IPR045274 GO:0007166
Blo02g00407 1115 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 905 1028 IPR045274 GO:0007166
Blo02g00407 1115 PANTHER PUTATIVE-RELATED 905 1028 - -
Blo02g00407 1115 Pfam Protein kinase domain 612 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00407 Blo-Chr2:5301206 Blo17g00163 Blo-Chr17:1521023 1.83E-12 dispersed
Blo02g00404 Blo-Chr2:5018484 Blo02g00407 Blo-Chr2:5301206 8.69E-23 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84143 PF00069 Pkinase 4.00E-53 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00407 - - rcu:8286731 669.077