Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00409 ATGGCTGGGATTCGGAGGACGAAGCTCGGGTCTCAGGGTTTAGAAGTGTCTGCTCAAGGCCTTGGATGCATGGGTATGTCTGCCTTTTACGGCGACCCTAAGCCGGATTCCGATATGATTGCTCTAATCCACCACGCCATAGCTGCTGGAGTCACCTTCTTGGATACTTCTGATATGTACGGTCCTTTTACGAACGAAATCCTATTGGGGAAGGCTCTCAAAGGAGGATTGCGGGAGAAAGTTGAGTTGGCTACCAAATTCGGTATTTCCTTCGTCAATGGGAAGAGGGAGATACGTGGTGATCCAGCCTATGTGAGAGCCGCTTGCGAGGCGAGCTTGAAGCGGCTCGATGTCGATTGCATTGATCTATATTATCAGCATCGGATTGACACTAGGGTCCCGATTGAAATCACGGTTAGTACTTTTACTATGGATAATACTATTTTTCTTTTTTCTTTTTCTCGTGCTGATCCGAAGATTGGGGAGCTGAAGAAACTAGTTGAAGAGGGTAAAATTAAGTACATTGGTCTATCCGAAGCCTCAGCTTCCACCATCAGAAGAGCTCATGCTGTTCATCCCATAACAGCAGTGCAGCTGGAATGGTCCTTGTGGACACGAGATGTGGAAGAAGATATAATTCCAACTTGCAGGGAGCTTGGTATTGGAATTGTGGCCTACAGTCCTCTTGGGCGAGGATTCTTATCAGCTGGTCCTCAGTTTGTCGAAAAGCTCAAAAATAACGATTTTCGAAAGTTATTGCCAAGGTTTCAACCTGAAAATCTCGAGCATAACAAAACTATATTTGAGCGGGTTAGCGAAATGGCATCGAGGAAAGGATGCACGCCTGCGCAACTGACTCTAGCCTGGGTCCACCACCAAGGCGACGATGTCTGCCCCATTCCGGGGACGACAAAGGTTGCAAATCTTGAGCAAAACATCGGGGCATTGACTGTGAAACTGACGGCAGAAGAAATGGCAGAGCTCGAATCCTTCGCGTCGGTAGATACCGTCAAGGGTGATCGATATGGGAGTGGCATTGCTACTTGGAAGGACTCTGAGACTCCTCCGCTTTCGTCTTGGGAGGCCTAA 1089 48.03 MAGIRRTKLGSQGLEVSAQGLGCMGMSAFYGDPKPDSDMIALIHHAIAAGVTFLDTSDMYGPFTNEILLGKALKGGLREKVELATKFGISFVNGKREIRGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTRVPIEITVSTFTMDNTIFLFSFSRADPKIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWTRDVEEDIIPTCRELGIGIVAYSPLGRGFLSAGPQFVEKLKNNDFRKLLPRFQPENLEHNKTIFERVSEMASRKGCTPAQLTLAWVHHQGDDVCPIPGTTKVANLEQNIGALTVKLTAEEMAELESFASVDTVKGDRYGSGIATWKDSETPPLSSWEA 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5330175 5331882 - BLOR10139 Blo02g00409 56639

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00409 362 CDD AKR_AKR13D1 5 328 - -
Blo02g00409 362 Pfam Aldo/keto reductase family 23 331 IPR023210 -
Blo02g00409 362 PANTHER AUXIN-INDUCED PROTEIN PCNT115-LIKE 159 360 - -
Blo02g00409 362 PANTHER AUXIN-INDUCED PROTEIN PCNT115-LIKE 4 140 - -
Blo02g00409 362 PANTHER AFLATOXIN B1 ALDEHYDE REDUCTASE 4 140 - -
Blo02g00409 362 PANTHER AFLATOXIN B1 ALDEHYDE REDUCTASE 159 360 - -
Blo02g00409 362 Gene3D - 4 358 IPR036812 -
Blo02g00409 362 SUPERFAMILY NAD(P)-linked oxidoreductase 6 331 IPR036812 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00409 - - - jre:109020709 584.719
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00409 Blo-Chr2:5330175 Blo02g00416 Blo-Chr2:5470941 0 dispersed
Blo02g00409 Blo-Chr2:5330175 Blo02g00410 Blo-Chr2:5366767 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1074 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone15ag0623 . . . . . . Blo02g00409 . . Bda13g00295 . . . . . . . . . . . . . . . . . . . . Cla07g01481 Cam07g1578 Cec07g1677 Cco07g1638 Clacu07g1569 Cmu07g1537 Cre07g1913 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002127 3 2 5 3 1 1 2 1 1 4 1 1 2 2 2 1 2 3 2 1 3 3 2 3 3 2 1 1 2 5 65
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo02g00409 Blo_Chr02 FPKM 20.792332 20.778566 38.161545 35.378811 119.6922 141.131393 131.516129 34.455147 34.710602 35.945827