Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00410 ATGAATGAAGGACGTGGCAGACTTGAAGAATTAAAGAGAAGAAGGAATAGGGTTTTTGCATTTTGGGTTTCCTGCTTCACTTCGGCCGCCAGAGAGAGAGAGAGAGAAAATTGCAGGGGAGGGAGAGAAGCATTCCGACCGGCAAGAGACGTCGCAAGGAGGCGACACGACGATGGTTGTTTTGTCCTCGTGTTCGGCGTGGGAAGCAGCTTTGCCGTCCGAGAAGACGAAGGCGAGCTCTCGGTAGTCGGTGGCTGCGGGCTTCTGAGCACGGGCGACGATCGCAGCTCCGACGAGGCTGAGCTGTCGGGACGTCGAGCCGCTGAACCACGAAGCTCCATTTCCTCCGATTTTGAGACTCCGATTAAGGTATCGGATTTGTTGACAGGAATGGCTGGGATTCGGAAGATGAAGCTCGGGTCTCAGGGTTTAGAGGTGTCTGCTCAGGGCCTGGGATGCATGGGTATGTCTGCCTTTTACGGCGACCCTAAGCCGGATTCCGATATGATTGCTTTAATCCACCACGCCATATCCGCTGGAGTCACCTTCTTGGATACTTCTGATATTTACGGTCCTTTTACGAACGAAATTCTATTGGGGAAGGCTCTCAAAGGAGGATTGCGGGAGAAAGTTGAGTTGGCTACCAAATTCGGTATTTCCTTCGCCAATGGGAAGACGGAGTTACGTGGTGATCCAGCCTATGTGAGATCCGCTTGCGAGGCGAGCTTGAAGCGGCTCGATGTCGATTGCATTGATCTATATTATCAGCATCGGATTGACACTAGGGTCCCGATTGAAATCACGGTTAGAACTTTTACTATGGATAATACTATTTTTCTGTATGCTTTATTCTCGACTATTGGGGAGCTGAAGAAACTAGTTGAAGAGGGTAAAATTAAGTACATTGGTCTATCCGAAGCCTCAGCTTCCACCATCAGAAGAGCTCATGCTGTTCATCCCATAACAGCAGTGCAGCTGGAATGGTCCTTGTGGACACGAGATGTGGAAGAAGATATAATTCCAACTTGCAGGGAGCTTGGTATTGGAATTGTGGCCTACAGTCCTCTTGGGCATGGATTCTTATCAGCTGGTCCTCAGTTTGTTGAAAAGCTCGAAAATAACGATTTGCGAAAGTCATTGCCAAGGTTTCAACCTGAAAATGTCGAGCATAACAAAACTATATTTGAGCGGGTTAGCGAAATGGCATCGAGGAAAGGATGCACGCCTGCGCAACTGACTCTAGCCTGGGTCCACCACCAAGGCGACGATGTCTGCCCCATTCCGGGGACGACAAAGGTTGCAAATCTTGAGCAAAACATCGGGGCGTTGACTGTGAAACTGACGGCGGAAGAAATGGCAGAGCTGGAATCCTTCGCGACGGTAGATACGGTTAAGGGTGATCGATATGGGAGTGGCGTTGGTACTTGGAAGGACTCTGAGACGCCTCCGCATTCGTCTTGGGAGGCCTAA 1470 50.0 MNEGRGRLEELKRRRNRVFAFWVSCFTSAARERERENCRGGREAFRPARDVARRRHDDGCFVLVFGVGSSFAVREDEGELSVVGGCGLLSTGDDRSSDEAELSGRRAAEPRSSISSDFETPIKVSDLLTGMAGIRKMKLGSQGLEVSAQGLGCMGMSAFYGDPKPDSDMIALIHHAISAGVTFLDTSDIYGPFTNEILLGKALKGGLREKVELATKFGISFANGKTELRGDPAYVRSACEASLKRLDVDCIDLYYQHRIDTRVPIEITVRTFTMDNTIFLYALFSTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWTRDVEEDIIPTCRELGIGIVAYSPLGHGFLSAGPQFVEKLENNDLRKSLPRFQPENVEHNKTIFERVSEMASRKGCTPAQLTLAWVHHQGDDVCPIPGTTKVANLEQNIGALTVKLTAEEMAELESFATVDTVKGDRYGSGVGTWKDSETPPHSSWEA 489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5366767 5371668 - BLOR10140 Blo02g00410 56640

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00410 489 MobiDBLite consensus disorder prediction 92 114 - -
Blo02g00410 489 SUPERFAMILY NAD(P)-linked oxidoreductase 136 458 IPR036812 -
Blo02g00410 489 Pfam Aldo/keto reductase family 153 458 IPR023210 -
Blo02g00410 489 PANTHER AFLATOXIN B1 ALDEHYDE REDUCTASE 134 487 - -
Blo02g00410 489 Gene3D - 134 485 IPR036812 -
Blo02g00410 489 PANTHER AUXIN-INDUCED PROTEIN PCNT115-LIKE 134 487 - -
Blo02g00410 489 CDD AKR_AKR13D1 135 455 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00410 - - - qsu:111998054 575.474
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00410 Blo-Chr2:5366767 Blo02g00416 Blo-Chr2:5470941 0 dispersed
Blo02g00410 Blo-Chr2:5366767 Blo02g00412 Blo-Chr2:5386104 1.57E-87 proximal
Blo02g00409 Blo-Chr2:5330175 Blo02g00410 Blo-Chr2:5366767 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1077 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo02g00410 . . Bda13g00294 . . Bma02g01000 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002127 3 2 5 3 1 1 2 1 1 4 1 1 2 2 2 1 2 3 2 1 3 3 2 3 3 2 1 1 2 5 65
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo02g00410 Blo_Chr02 FPKM 14.441442 12.592427 16.245106 12.253021 16.672598 14.582295 13.756862 14.081918 12.716954 11.518158