Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00441 ATGGGGGCCAGCACCGGTGGCGGCCTAACTCGCTACGGCTCCGCCCCCGGTTCTTTCCTGACCACAGCCGTCGATTCCGTGATCGCAGCGCATCCGAGCTCTTCCGCCGCAGCTGTTCGTTCTCAGCAGGCCTTGTTAAACCCCTATTTCTCCTCCGGCGACTCCTCCGTCGAGTCGTCCAGTAAAATCATGTACGCCGCCGCATCCCACAATCCAAGAGGCTTGCAGAGGTCGTACGGCAGCCAGGAGCTGTCGCTTGGAGATTTGAACGGCATTGGAGGTGGAACTTCTTCTTCCTCAACTTCTTCTTCTTCTTCTTTGATGAGGCAGCGAAGCTCACCGGCGGGTTTCTTCTCCCACCTCGCCGCTCCTGACAGCAATGGATTTTCAGTTTCAAGGGACGCTGGGAATTACAGCTCACAAGGTGGACAAAGTGGTGTAGGAGTTTCAAGATTGAAACCTCAGCTGAGCTTCACAAGGCAAGATTCTCTGTCACAAATTTCCGAAGTGTCTGAGAATATAATCGACGGAATCGATTCGAATAATGCTCGCCAATCTTACGGCACCGCGACTAGCTTCGGGATCAGCTCTTGGGACCCCGCCAATACCGTTGTATTTTCTTCTCTCCAAAACAAACGACCTAGGAACATCGATCCGGACATGTTCGACTCCCTTAATGGCTTAGAATCTCAGTTTAATCTTCCGGCAGGTCTGGAGATGGCAGCAGTGGAGAAGCTACTCCACATCCCGGAAGATTCTGTCCCGTGCAAGATCCGTGCCAAGCGTGGTTGTGCGACTCATCCCCGCAGTATTGCCGAAAGGGAACGGAGGACGCGAATAAGTGGGAAATTGAAAAAATTACAAGAACTAGTGCCTAACATGGATAAGCAAACAAGCTACGCGGACATGCTGGACTTGGCAGTGCAGCATATCAAGGGACTTCAAAATCAAATCGAGGAAATTGATGCAGAAGCGTGGGCAGACAAGGGGGAGGCTAGTGAAAGACGAGCAACCGAGGTGGTGGAAGCCGCGGGGCGAGAAGATGTTCAACCCGACGTGGTGGAAGAAGTTCAACGAGCAACGGCGGTGGAAGTCGAAGACACCTCCGAGCCTGAACAAGTAGAAGTAGAGTTATTATTCAAGATAGACGATGGCAAAAGACGGTATGAAGAAGATGTAGCACACCGTGGCATTATTGTTTCAAAAATAGTCGATTTTGACTCTTTCACAGAAATGGGAATTCAACATATGTTGGAAGAGGCTGGATTACTCGGGTTAATGCTTGAATGTGTGATAGACGTGGAAAACAATGAATATTATCACATATCTAAGAAGCCACCATTTGTCAAGCAAGGAGATGGGATGGCGGTTCTTAAATTGTTGCAGTGGGATCCCGAGATTGCCCATTATAAGAAGCCAAAGGCTAATGAGTTGAATGTAATAGCCCGAGTGATACACCTGATATTGACGTACATGATTTTGCCTAGGATTGGGCATCGAGACCATGTTGCCAGCATGGATCTTTATATTTTAGAGAAGGTGTTCAGGGGGAAAAAGGTGAACATCGGATATATCATTGTGAAGCACATGCAAGAGGTCGTCAACAACCCAACAATGAGCCTACCGTACAACTGGCTGATCCATAGTAATGTTGAGCAGTTTGGGGTACCCATCTCTGCGAATGAGCCGAGAATTGAAGCGACGGCTAATGACACCTACAACAAAGCCAACTTGGATCGATTGGGCATCACTTAA 1755 49.0 MGASTGGGLTRYGSAPGSFLTTAVDSVIAAHPSSSAAAVRSQQALLNPYFSSGDSSVESSSKIMYAAASHNPRGLQRSYGSQELSLGDLNGIGGGTSSSSTSSSSSLMRQRSSPAGFFSHLAAPDSNGFSVSRDAGNYSSQGGQSGVGVSRLKPQLSFTRQDSLSQISEVSENIIDGIDSNNARQSYGTATSFGISSWDPANTVVFSSLQNKRPRNIDPDMFDSLNGLESQFNLPAGLEMAAVEKLLHIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVQHIKGLQNQIEEIDAEAWADKGEASERRATEVVEAAGREDVQPDVVEEVQRATAVEVEDTSEPEQVEVELLFKIDDGKRRYEEDVAHRGIIVSKIVDFDSFTEMGIQHMLEEAGLLGLMLECVIDVENNEYYHISKKPPFVKQGDGMAVLKLLQWDPEIAHYKKPKANELNVIARVIHLILTYMILPRIGHRDHVASMDLYILEKVFRGKKVNIGYIIVKHMQEVVNNPTMSLPYNWLIHSNVEQFGVPISANEPRIEATANDTYNKANLDRLGIT 584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5971134 5979745 - BLOR10171 Blo02g00441 56671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00441 584 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 8 324 - -
Blo02g00441 584 PANTHER TRANSCRIPTION FACTOR BHLH129 8 324 - -
Blo02g00441 584 MobiDBLite consensus disorder prediction 86 110 - -
Blo02g00441 584 Pfam Helix-loop-helix DNA-binding domain 269 315 IPR011598 GO:0046983
Blo02g00441 584 SMART finulus 270 320 IPR011598 GO:0046983
Blo02g00441 584 Gene3D - 261 324 IPR036638 GO:0046983
Blo02g00441 584 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 264 314 IPR011598 GO:0046983
Blo02g00441 584 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 267 324 IPR036638 GO:0046983
Blo02g00441 584 Coils Coil 304 324 - -
Blo02g00441 584 CDD bHLH_AtbHLH_like 269 320 IPR045239 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00441 Blo-Chr2:5971134 Blo10g00908 Blo-Chr10:28048659 3.05E-134 dispersed
Blo17g00236 Blo-Chr17:2390044 Blo02g00441 Blo-Chr2:5971134 7.21E-29 dispersed
Blo06g01217 Blo-Chr6:35762967 Blo02g00441 Blo-Chr2:5971134 3.43E-99 transposed
Blo10g00124 Blo-Chr10:1340608 Blo02g00441 Blo-Chr2:5971134 1.36E-39 wgd
Blo02g00441 Blo-Chr2:5971134 Blo05g00198 Blo-Chr5:2029740 3.35E-12 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12018 PF00010 HLH 9.70E-09 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00441 - - pavi:110769086 360.147