Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00449 ATGGCGAATCTCGTCCCTGGTGTGCTCCTCAAGCTTCTTCAACACATGAATACAGATGTGAAAGTTGCAGGAGAGCATAGGTTGTCTCTTTTGCAGGTCGTCAGTATCGTTCCAGCTCTTGCCGGAAGTGAGCTTTTTCCAAATCAGGGTTTTTATCTAAAAGTCTCTGATTCTTCTCACGCCACATACGTTTCACTTCCCGATGAACACGACGATCTAATTCTCAGCGATAAAATCCAATTGGGTCAGTTCATTCACGTCGAACGGCTGGAATCGGCTTCTCCGGTCCCAATTCTTCACGGCGTTAGGCCGATTCCCGGCCGACACCCTTGTGTGGGAAGCCCGGAAGATATTGTCGCGACTCATTCTCTTAATTTTCTCGCTAGTTCTTCTTTGAGTTCTAAGACTGGTGAAAAGGCGAAATTGGGTTCAAAGGAGAAATCTTCGAATCTAAGATTGAACGGGATTAGTGTTAAGGAAGAACAATCCGAGAAGAAAGTGCCGTCTTTTAGTCGATCTAAATCGAATTTATCCAAATCTGCACTGAATTTGGACGTGAAAAGGGAATCATTGACTAGACTGAAGTCCTCCAATTCCAAGTCGATCCCTTCGTCTCCGACAAGTTGTTATTCGTTGCCAACTTCTTTCGAGAAATTTTCCAGTGGGATCAAACAACAACAAGCAAAGATCAAAGGGACAGAGAAAGGAACAGCTCGGGTGGGGCTACCAGAAAAGTCGGCCTCTGTTCGATCTGCCAGTCCGACTGTAAGGAAAGTTTCCATGGTTACTCCAATAAGAAATTTGGTTCAGGGAATTGAGCTCGGGGCTAAGGCTTTGAGGAAGAGTTGGGAAGGGAATATGGAGGTAAAGAATAAGGATAACTCAAAATTTAGAGCTACCAAGATCGTCCCAAAGCTCGATATGCGAAGTTCTGCTCCTAAAAAAAGTACGCTGAGCGAAAAGATGCAATCAAAAGAGGAAAACAAGGTTCAGCTATCGACGAGGTCGGCAAAAGAGGAGAACAAAGTTCAGACCTCGACGAAGAAATCTGCAGCAAATGGAGACATTGATGGCGCGAACTCGAATAAGCAAAGAACCTCAGTTGGAAAGAGATTATCAAATGATTCAGCTCATAAAGGGCCTCTGGGAAATTTGGTAAAGATCCCTTTGAATAATAGAAGATTGGCAGACAGTTATCTGTCATGGGCGTCCCTCCCACCATCACTTGCCAAGCTCGGAAAGGAAGTTTTGAAGCACAGAGATGCAGCTCAAACAGCTGCAGTAGAGGCAATGCAAGAAGCTTCTGTGGCAGAGAGCATACTCCAATGTTTAAGCAAATATTCTGAGCTAACCATTTCTGCCAAAGAGGACAACCCACAACCTACAGTAGAGCAGTTTTTGTCCCTCCACGCTAGCTTGACCCGTGCTCGTACCATTGCCAACTCGCTCTTTAAAACTATTCCCTCCGAATCATCACTGGAAGGTGAAGAGGCACCATCAGAAGAAGCCGTAAAACTCACTTCAGACAGAAGAAAATTAGCAACTCTTTGGATCCAAGCCGCCTTGGTTTCGAATCTATCGACTTTTTCAGTATACAGCAAGGAACCTAATTTGATTCCGGCTCCAATTCAGAAAAACTCTGGGAATCAACCTTTACTGGTTCTTGAAAATTCGTCCAAAAACTCTTCATCCAAACCCCAATCCAAAATTCGTCAGACGCTCGGATCGAAGTCTGTGTCCACGACAACATCTCGTCGTGTCGGTGATGGATCGTCTGTTAATCAAAAGCCTGATGTTCAACCTTTACGGGAATGGATTAGAGGTAATGGGCTCGATGAAGCCATTGACTTAGCAGACGTATTACGCACTCAATCGCAAGACTGGTTTCTCGGGTTTGTGGAGAGATTCCTCGACGCAGAAGTGGACACATCGGTATTGTCGGATAACAGCCAAATAGCCGGGATTTTGACACAGCTCAAGAGCGTAAATGATTGGCTGGATGAGATTGGATTGACCAAAGATGAAGTAGAAACCTTGCATGTTTCTTCTGAGACTATAGACAGGCTACGGAAGAAGATTTACGAGTATCTTCTCACACACGTCGAATCTGCAGCTGCTGCACTCGGGACTGGATCTCAACCGCCGTCTCAGGTCGATAAAAACGAACAGAGAGTTCGAAGATGA 2184 45.1 MANLVPGVLLKLLQHMNTDVKVAGEHRLSLLQVVSIVPALAGSELFPNQGFYLKVSDSSHATYVSLPDEHDDLILSDKIQLGQFIHVERLESASPVPILHGVRPIPGRHPCVGSPEDIVATHSLNFLASSSLSSKTGEKAKLGSKEKSSNLRLNGISVKEEQSEKKVPSFSRSKSNLSKSALNLDVKRESLTRLKSSNSKSIPSSPTSCYSLPTSFEKFSSGIKQQQAKIKGTEKGTARVGLPEKSASVRSASPTVRKVSMVTPIRNLVQGIELGAKALRKSWEGNMEVKNKDNSKFRATKIVPKLDMRSSAPKKSTLSEKMQSKEENKVQLSTRSAKEENKVQTSTKKSAANGDIDGANSNKQRTSVGKRLSNDSAHKGPLGNLVKIPLNNRRLADSYLSWASLPPSLAKLGKEVLKHRDAAQTAAVEAMQEASVAESILQCLSKYSELTISAKEDNPQPTVEQFLSLHASLTRARTIANSLFKTIPSESSLEGEEAPSEEAVKLTSDRRKLATLWIQAALVSNLSTFSVYSKEPNLIPAPIQKNSGNQPLLVLENSSKNSSSKPQSKIRQTLGSKSVSTTTSRRVGDGSSVNQKPDVQPLREWIRGNGLDEAIDLADVLRTQSQDWFLGFVERFLDAEVDTSVLSDNSQIAGILTQLKSVNDWLDEIGLTKDEVETLHVSSETIDRLRKKIYEYLLTHVESAAAALGTGSQPPSQVDKNEQRVRR 727
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6154644 6158210 - BLOR10179 Blo02g00449 56679

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00449 727 MobiDBLite consensus disorder prediction 554 599 - -
Blo02g00449 727 MobiDBLite consensus disorder prediction 708 727 - -
Blo02g00449 727 MobiDBLite consensus disorder prediction 319 345 - -
Blo02g00449 727 Pfam Plant protein of unknown function (DUF936) 4 708 IPR010341 -
Blo02g00449 727 MobiDBLite consensus disorder prediction 304 379 - -
Blo02g00449 727 Coils Coil 315 342 - -
Blo02g00449 727 MobiDBLite consensus disorder prediction 346 373 - -
Blo02g00449 727 MobiDBLite consensus disorder prediction 153 174 - -
Blo02g00449 727 PANTHER EXPRESSED PROTEIN 1 724 IPR010341 -
Blo02g00449 727 MobiDBLite consensus disorder prediction 554 598 - -
Blo02g00449 727 PANTHER DUF936 FAMILY PROTEIN 1 724 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00449 - - - zju:107421786 922.539
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00449 Blo-Chr2:6154644 Blo07g00795 Blo-Chr7:25679229 1.10E-06 dispersed
Blo02g00449 Blo-Chr2:6154644 Blo07g00115 Blo-Chr7:1588834 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1277 . . . . . Bpe14g01063 . . . Cmo17g00591 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo02g00449 . Bda11g00478 Bda13g00251 . . Bma02g00967 . . . . . Cma17g00609 Car08g00175 Car17g00576 . Cpe17g01086 . . . . . . . . . . . . . . . . . Cme11g02453
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009199 1 1 2 1 2 1 2 0 1 1 0 1 0 1 1 1 1 2 1 1 1 1 1 1 1 1 1 2 3 1 34
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo02g00449 Blo_Chr02 FPKM 18.771595 21.975052 14.061451 15.70668 11.776191 11.882558 13.549129 20.681652 20.198652 18.500099