Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00475 ATGGCGCCGGCTCTGATTTTGAATCCCGTTTCGCAATCTGGTGGCTCCCGCGATTCTTCCAGCAAGAAAAAGAAGAAGAGGAATCAGAGGAGTAAAGATAATCGCCAATCGCAGAATCACAGGCAATGGAAATCTGAATCTCAACAGCAACTCTACTCGTCCAAACTGGTTCAAGCTCTTTCTCGAATTAGGCTCACCTCCCCCTCTATTTCGTCTTCCAATGAAACGCCTCGCCTTGGCAGAGCCGTCCGGGAGGCCGCCGACAGAGTCCTGGCCATGGCGGCGAAAGGGCGAACTAGGTGGAGCCGAGCGATTTTGACGAACCGACCCAAGGTAAAGTTTCGGAAACACAAACGGAAGAGGGCATCTACCGGCGTAAATAGGCACTCAAAGAAACCGAGAGTTGGTGTTTGGAGATTGAAAGGAAAGTGCTTGCCGGCAGTGCAGAGGAAAGTTAAGGTTCTCCGCCGGCTAGTTCCCGGTTGCGAGAAGGAACCTTTGCCGGTGATTCTAGAAGAAGTTGCTGATTATATTAAAGCTCTTGAGATGCAGGTTCGCTCTATGACCACTCTGGCAGGCTTGCTCTCTGGTGACGCTTCCGGTGCCGGCTCAACCTTTACACCACACCGTTGA 633 51.82 MAPALILNPVSQSGGSRDSSSKKKKKRNQRSKDNRQSQNHRQWKSESQQQLYSSKLVQALSRIRLTSPSISSSNETPRLGRAVREAADRVLAMAAKGRTRWSRAILTNRPKVKFRKHKRKRASTGVNRHSKKPRVGVWRLKGKCLPAVQRKVKVLRRLVPGCEKEPLPVILEEVADYIKALEMQVRSMTTLAGLLSGDASGAGSTFTPHR 210
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6814485 6815117 - BLOR10205 Blo02g00475 56705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00475 210 CDD bHLH_AtIBH1_like 139 192 IPR044549 GO:0006355
Blo02g00475 210 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 7 205 IPR044660 GO:0006355
Blo02g00475 210 MobiDBLite consensus disorder prediction 1 50 - -
Blo02g00475 210 PANTHER TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1 7 205 - -
Blo02g00475 210 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 151 197 IPR036638 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00475 Blo-Chr2:6814485 Blo12g00075 Blo-Chr12:4935493 8.75E-68 dispersed
Blo01g00036 Blo-Chr1:456554 Blo02g00475 Blo-Chr2:6814485 5.95E-78 wgd
Blo02g00475 Blo-Chr2:6814485 Blo07g00136 Blo-Chr7:1841532 1.03E-99 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00475 - - vvi:100243127 221.476