Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00477 ATGAGTTCAAATGTAACAGTGCTAGGAGTTCCTCTTCCTTCAAACCTTCAATACAACGATGCTAGCCCAGAATGGATGAACAAAGGCGACAATGCTTGGCAGCTCACTGCAGCCACACTCGTGGGGCTGCAAAGTGTACCGGGGCTCATAATTCTGTACGGTGCGGCGGTGAAGAAGAAATGGGCTATAAACTCAGCATTCATGGCGCTCTACGCCTTTGCATGTGTCCTTATTTGTTGGGTGCTATGGGGTTATAGATTGTCATTTGGGGACAGAATGATTCCATTTTGGGGGAAACTTAACTTTGCTGTTGACCAGAAGTTCCTACTCGGGCCAACATTTTCGGGGATGCTCCCTAATGCTACAATGGTGTATTTCCAGTTTGTCTTTGCAGCGATTACTCTTATTTTGATCGCCGGCGCAGTGTTGGGCCGGATGAACTTCTATGCGTGGATGCTGTTTGTGCCTTTGTGGCTTACTTTTTCCTATACAATTGGAGCATTTTCCATCTGGAGTCCGAATGGTTTCCTCAACAAAATAGGACTGATTGATTATTCTGGTGGTTATGTCATTCATTTGTCTTCAGGCGTTGCTGGTTTCACTGCTGCATATTGGGTTGGTCCTCGTATGACAAAGGACAGGGAAAACTTCCCGCCGAACAACGTCCTTCTCATGCTAGCCGGAGCAGGATTGCTCTGGATGGGATGGACGGGGTTCAACGGAGGAGACCCTTATGTGGTCAGCACTGACGCTTCGTTGGCTGTTTTGAACACTCACATCTGCACTGCGGCAAGTCTGCTCACTTGGCTTGTTCTTGATGTCATCTTCTTTGGAAAACCTTCTCTTATTGGCGCTGTTCAAGGCATGATCACTGGTTTGGTCTGCATTACACCCGCGGCCGGTGTAGTGCAGGGCTGGGCAGCAATCGTAATGGGAATCTTTTCAGGCTCCATTCCTTGGTTAACAATGATGGTTGTCCACAAGAAATCTAAGCTTCTTCAAAAGGTGGATGACACAATGGCTGTTTTTCACACCCACGCCGTCGCCGGAAGCCTCGGAGGGATCCTTTCCGGCCTCTTCGCCGAGCCAAGGCTATGTTACTTGTTTTACGGTAGTTACAACCGTTATGTCGGCCTATTATACGGCCTTCAAATGGGAAAAGTCCATGAAGGGTTTCGACAAATTGGAATTCAACTCATCGGAATCTTATTTGTCACCTGTCTCAACGTGGTGACCACTAGTTTAATCTGTCTGATGGTGCAGTTTATAATTCCTCTGAGGATGTCTGATGAAGACATGGCGGTGGGAGACGAAGCCGCTCACGGAGAAGAAGCCTACGCCATATGGGGAGACGGTGAAAAGCTTGAAAAGTTTAAGCATAGTGGAATGGGCTATGGCGATGTGGAGGCGCCCAACTCTATCAAATATAAAGGTGGTGGCCAAATTGAGATGGGTAGGGTTTGA 1464 47.81 MSSNVTVLGVPLPSNLQYNDASPEWMNKGDNAWQLTAATLVGLQSVPGLIILYGAAVKKKWAINSAFMALYAFACVLICWVLWGYRLSFGDRMIPFWGKLNFAVDQKFLLGPTFSGMLPNATMVYFQFVFAAITLILIAGAVLGRMNFYAWMLFVPLWLTFSYTIGAFSIWSPNGFLNKIGLIDYSGGYVIHLSSGVAGFTAAYWVGPRMTKDRENFPPNNVLLMLAGAGLLWMGWTGFNGGDPYVVSTDASLAVLNTHICTAASLLTWLVLDVIFFGKPSLIGAVQGMITGLVCITPAAGVVQGWAAIVMGIFSGSIPWLTMMVVHKKSKLLQKVDDTMAVFHTHAVAGSLGGILSGLFAEPRLCYLFYGSYNRYVGLLYGLQMGKVHEGFRQIGIQLIGILFVTCLNVVTTSLICLMVQFIIPLRMSDEDMAVGDEAAHGEEAYAIWGDGEKLEKFKHSGMGYGDVEAPNSIKYKGGGQIEMGRV 487
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6850474 6852201 - BLOR10207 Blo02g00477 56707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00477 487 ProSitePatterns Ammonium transporters signature. 184 209 IPR018047 GO:0008519|GO:0016020|GO:0072488
Blo02g00477 487 SUPERFAMILY Ammonium transporter 25 428 - -
Blo02g00477 487 PANTHER AMMONIUM TRANSPORTER 10 484 - -
Blo02g00477 487 PANTHER AMMONIUM TRANSPORTER MEP2 10 484 IPR001905 GO:0008519|GO:0016020|GO:0072488
Blo02g00477 487 PRINTS Rhesus blood group protein signature 127 143 IPR002229 GO:0005887
Blo02g00477 487 PRINTS Rhesus blood group protein signature 254 276 IPR002229 GO:0005887
Blo02g00477 487 PRINTS Rhesus blood group protein signature 223 241 IPR002229 GO:0005887
Blo02g00477 487 TIGRFAM amt: ammonium transporter 30 446 IPR001905 GO:0008519|GO:0016020|GO:0072488
Blo02g00477 487 Pfam Ammonium Transporter Family 32 446 IPR024041 GO:0008519|GO:0016020|GO:0072488
Blo02g00477 487 Gene3D Ammonium transporter AmtB like domains 12 449 IPR029020 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00477 Blo-Chr2:6850474 Blo07g00141 Blo-Chr7:1892938 0 dispersed
Blo06g00269 Blo-Chr6:14480165 Blo02g00477 Blo-Chr2:6850474 0 transposed
Blo06g00424 Blo-Chr6:24638389 Blo02g00477 Blo-Chr2:6850474 0 transposed
Blo02g00477 Blo-Chr2:6850474 Blo07g00139 Blo-Chr7:1877222 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00477 K03320 - csv:101210590 771.541