Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00504 ATGATTTGTCAATGCTGTGCCTTTGGAAAGTTTGACACCACTTCACACCTTCCTCCAAGGAGTAAGAATGTGGATGCCAATAAGAAAGACTACTCAACTTACAACTCAACAAGGAATAAAGGCGAAGCAGAGGCTCCTGCAGAATCGTCTGAAAGTTCAGCAATGGCGGAGAATGGGAAGCAAGTGATGGTGATCGGCGTCGATGAGAGTGCACATAGCTTCTACGCGTTGCAGTGGACGCTTGACCATTTCTTTGCTTCTCATTCTCAATCTTTGTTCAAACTTGTGATCGTCCATGCTAGAGCCGCTCCATCCTCCGTTCTCGGAGTCGCTGGGCCTGGTTCTGTGGACATTTTACCGATCATTGATGGAGATTTGAAGAAAATAGCAGCCAGAACCATTAACAACGCTAAGGAGATGTGCAGCAATAATTTGGTTGAAGATGTCCAGTTTGAAATAATGGAGGGTGATCCCAGGAATGTAATGTTGGAAGCTGTAGAAAAGTTCCATCCTTCCATCTTGGTTCTTGGGAGTCATGGTTATGGAGCAGTAAAAAGGGCGGTTCTGGGTAGTGTAAGTGACTATTGTGCACATCATGCCCAATGCTCTGTGATGATTGTGAAAAGGCCACATAAAAGCAAGCATTGA 648 45.06 MICQCCAFGKFDTTSHLPPRSKNVDANKKDYSTYNSTRNKGEAEAPAESSESSAMAENGKQVMVIGVDESAHSFYALQWTLDHFFASHSQSLFKLVIVHARAAPSSVLGVAGPGSVDILPIIDGDLKKIAARTINNAKEMCSNNLVEDVQFEIMEGDPRNVMLEAVEKFHPSILVLGSHGYGAVKRAVLGSVSDYCAHHAQCSVMIVKRPHKSKH 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7970199 7972905 - BLOR10234 Blo02g00504 56734

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00504 215 MobiDBLite consensus disorder prediction 28 43 - -
Blo02g00504 215 PANTHER - 55 214 - -
Blo02g00504 215 MobiDBLite consensus disorder prediction 19 54 - -
Blo02g00504 215 PRINTS Universal stress protein signature 60 78 IPR006015 -
Blo02g00504 215 PRINTS Universal stress protein signature 168 180 IPR006015 -
Blo02g00504 215 PRINTS Universal stress protein signature 186 208 IPR006015 -
Blo02g00504 215 Pfam Universal stress protein family 62 208 IPR006016 -
Blo02g00504 215 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 64 212 - -
Blo02g00504 215 Gene3D HUPs 48 215 IPR014729 -
Blo02g00504 215 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 55 214 - -
Blo02g00504 215 CDD USP_Like 63 207 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00504 - - - pvy:116119847 228.409
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00504 Blo-Chr2:7970199 Blo05g00307 Blo-Chr5:3460182 1.14E-71 dispersed
Blo16g00161 Blo-Chr16:3688367 Blo02g00504 Blo-Chr2:7970199 8.19E-06 dispersed
Blo02g00504 Blo-Chr2:7970199 Blo07g00171 Blo-Chr7:2180663 1.24E-43 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g294 . . . . . Bpe14g01127 . . . . Cma06g01503 . Car06g01294 . . Cpe08g00181 . Bhi01g01022 Tan10g1014 Cmetu06g1461 . Hepe05g1442 . . . . . . . . . . . . . . . . Cme06g00737 Blo02g00504 . . . . . . Bma06g01498 . Cmo06g01501 . . . . . . . . . . . . . . Cla05g00657 Cam05g0719 Cec05g0729 Cco05g0728 Clacu05g0713 Cmu05g0678 Cre05g0752 . Csa03g01472 Chy06g00709 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000594 1 7 3 4 3 2 4 2 2 4 3 2 5 5 4 5 2 4 4 2 4 4 4 3 3 4 4 2 5 3 104
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo02g00504 Blo_Chr02 FPKM 13.951742 14.571001 9.012539 9.264608 15.773673 13.823336 17.286331 14.08314 12.826324 15.362336