Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00508 ATGCAAAACGAAGAGGGCCAAATCACTGAGCTTTACATTCCCAGAAAATGCTCTGCAACGAACCGGCTGATTACTTCGAAGGATCACGCTTCTGTTCAGGTCAATGTCGGTCATTTGGACGAAAATGGTGTTTACACTGGCCAGTTTACTACCTTCGCCCTTTGTGGTTTTGTCCGTGCGCAGCCATCTGTGATGCAAGGAGAAACTGTAATAAACTCTGAAGGAGAACTTAGAGTAAGCTTTGGTTATCAATGCACTTCCAGAGGCAACAACAATGAAGTTCTTAATGGGTTTGAGATTCAGCCTCAAATCCGGAAGACAAGCAGTTTCTCTTGCTTGTCTGGTGCTGCCTTGAGTGCCAACGCCACTCTCGCAAATACAAATATATGCAATGGTCTGATAGGGGCAGAAATACTTCCTAGTTTGGACTCCCCCAATTCATTTCGTCGAATTCCCTCTTCTCCTAACGTATCGAGGTTGGATATACTATCGTCTTCTCTACAGAGCAGTTTATCCAATTTAAGTTGCAGTCCATCCTCTCCACCCGATTATGATTCATATTCTTTGAAATGCATGAGCATTCCTACAAAAAATGAGAGTTTTCTCAATGCATCGGAAGTACAAGTTGCCGGTGGAGCTGCCGGTGAAGACAGAGTCCAGGCCGTTTGTTCTGAAGAAAGCGGGTGGCTGTTTTGTGCTATTTATGATGGATTTAATGGTAGAGATGCAGCTGATTTTCTGGCTGGTACATTGTATGAAACCATTATGTATTACTTTAATCTCATGGATTGGGAAAGTGGGCAGGACTTTGTTAGATCTTCTGATGAGCTAGAAATTGATGGGCCTCTCCAATATGTTCTAGATGACGGCAACAATGATAATGGCGAAAAGTATCCTTCAAGGATCTGTTTCAAAACAGATAAAAATGTTAATGACAGATTTAGGAATGAGTCATTTGGTAAAAAGGAGGCGACTAAAGATTCATTTAGGCTTGCAGTTCTTGACAGTCTTCAACGTGCTTTAAGCCAAGCTGAGAATGATTTTTTGTATATGGTTGAACAAGAAATGGACGATCGTCCCGATTTGGTTTCAATCGGTTCTTGTGTTTTGATTGTGCTTCTTCATGGGAATGATTTGTACACTCTGAATTTAGGTGATAGCCGAGTAGTCTTAGCTACTCATGGAGAATGTGCTAATCCACCTGAAAATGAGAGGCTCAAAGCTGTTCAGCTTACTGAAAGTCATACTGTCGATAATGAAGCTGAGAGAACTCAACTACAAAACGAGCACCCTGATGATCCCATGGTCGTTGTTGGTGGAAAAGTTAAAGGAAAACTTAAGGTCACTCGCGCATTTGGAGTCGGGTATTTAAAAAAGAAAAAGCTGAATGATGCACTAATGGGTATCCTACAAGTTCGAAATCTTATAAGTCCTCCCTACGTAACCACCCAGCCGGCAATGAATGTTCATACGATTTCAAAATCTGATCGATTTGTCGTTGTAGCAAGTGACGGTTTGTTCGATTTTTTCACAAACGAAGAAGCTGTAAAGCTCGTGCATTCCTACATCACGAGTAACCCTTTGGGTGACCCTGCAAAATTTCTTCTCGAGCAGCTGATACTTAGAGCAGCCGATTGTGCGGGCTTTACGATGGAAGAATTAATGAATATTCCGGCCGGTATAAGAAGGAAGTACCACGACGATGTGACTGTCATGGTTATCATCCTCGGAACAAACCAACGGACGACAAAGGCGTCAACTTTTATCTAA 1770 42.2 MQNEEGQITELYIPRKCSATNRLITSKDHASVQVNVGHLDENGVYTGQFTTFALCGFVRAQPSVMQGETVINSEGELRVSFGYQCTSRGNNNEVLNGFEIQPQIRKTSSFSCLSGAALSANATLANTNICNGLIGAEILPSLDSPNSFRRIPSSPNVSRLDILSSSLQSSLSNLSCSPSSPPDYDSYSLKCMSIPTKNESFLNASEVQVAGGAAGEDRVQAVCSEESGWLFCAIYDGFNGRDAADFLAGTLYETIMYYFNLMDWESGQDFVRSSDELEIDGPLQYVLDDGNNDNGEKYPSRICFKTDKNVNDRFRNESFGKKEATKDSFRLAVLDSLQRALSQAENDFLYMVEQEMDDRPDLVSIGSCVLIVLLHGNDLYTLNLGDSRVVLATHGECANPPENERLKAVQLTESHTVDNEAERTQLQNEHPDDPMVVVGGKVKGKLKVTRAFGVGYLKKKKLNDALMGILQVRNLISPPYVTTQPAMNVHTISKSDRFVVVASDGLFDFFTNEEAVKLVHSYITSNPLGDPAKFLLEQLILRAADCAGFTMEELMNIPAGIRRKYHDDVTVMVIILGTNQRTTKASTFI 589
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8020658 8027026 + BLOR10238 Blo02g00508 56738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00508 589 ProSitePatterns Ribosomal protein S21e signature. 11 19 IPR018279 GO:0003735|GO:0005840|GO:0006412
Blo02g00508 589 SUPERFAMILY PP2C-like 213 577 IPR036457 -
Blo02g00508 589 ProSiteProfiles PPM-type phosphatase domain profile. 201 576 IPR001932 -
Blo02g00508 589 Pfam Ribosomal protein S21e 1 61 IPR001931 GO:0003735|GO:0005840|GO:0006412
Blo02g00508 589 PANTHER PROTEIN PHOSPHATASE 2C 66 588 IPR015655 GO:0004722|GO:0006470
Blo02g00508 589 Gene3D - 1 83 IPR038579 -
Blo02g00508 589 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 66 588 - -
Blo02g00508 589 SMART PP2C_4 192 574 IPR001932 -
Blo02g00508 589 Pfam Protein phosphatase 2C 336 527 IPR001932 -
Blo02g00508 589 CDD PP2Cc 214 576 IPR001932 -
Blo02g00508 589 Gene3D - 186 585 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00508 Blo-Chr2:8020658 Blo12g00428 Blo-Chr12:21779449 3.57E-81 dispersed
Blo02g00226 Blo-Chr2:2115620 Blo02g00508 Blo-Chr2:8020658 2.31E-167 transposed
Blo02g00508 Blo-Chr2:8020658 Blo07g00174 Blo-Chr7:2208992 1.85E-25 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00508 - - qsu:111988460 737.258