Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00515 ATGTCTCGATCTTGGTCTCCAGTAGTCCCTCGATCTCGATCGCCAGTCGTCCCTCGATCTCAGTCGCCAATCGTCCCTCAATCTCGATCTCCAATCGTCCCTCAATCTCGATTGCCAGTCCTCCCTCGATCTCAGTCGCCAATCCTCCTCGATCTCAATCGCCAGTCGCCTCTTGTTGGATGGTTATGGATTTTTGATCATGCAGTTGAAAGAAAGAGCATTCAGAAGAGGAAGTTCTCTGATATGCTAGGGCCTCAATGGAACAAGGAGGAGCTAAAGCGATTTTACGAAGCATATAGAAAATATGGGAGGGATTGGAAGAAGGTGGCAGCTATTGTAGGTAATCGGTCTGTTGAAATGGTTGAATCCCTTTACACCATGAATAGGGCCTACTTATCACTTCCAGAGGGCACTGCATCGATCGTTGGACTTGTAGCCATGATGACTGATCACTACTGTGTACTGGGAGGAAGTGATAGCGAACAAGAAAGCGACGAGGGTTTAGGAGCATTACAGAACCCCCAGAAGCGAGCCCGTGGAAAATTGCGGAATAACGTCTCTAAAATATCCAGTGGATCTGTTGACGATGTAACACTTTCCCAGTCTCTTGCATCAACTGATGGCTGCTTGTCACTTTTGAAGAAGAGGCGTTCGGGAATGAAACCTCATGCTGTTGGAAAAAGGACTCCTCGTGTTCCAGTTTCTTATTCATGTGATAAGGAGAGAGAGACATATTTTTCACCAGCTAGGTTAGGTTTAAAGCTAAAGGCACATGCTAACAGTGACGAAGATGTTGCTCATGAAATAGCATTAGCATTAACAAAGGCTTCACAAAGAGATGGTTCTTCCCAACTTTCTCAAACACCCAATCAAAAGTTTGAAGTGCCTGTGCTTCCACCTTTTCTGAGTGGCGTCAGGATGAGAAGTGAATCAGAAATGACCAGTGCCAAACTTCGTTGTAGTGAAATGGATGAAGGTGGTTGTGAATTGAGCTTTGGGAGTACAGGAGCAGATTATGAGAGGGCAAAAAAGAGTTGCACAGTGCGCAGAGGTCGTGCTGTTGCATTTGAGGCCCAAAAGAAGGGGAATAGGTATAATGTAAAGAAGCAAAAAGATGAGGAAAATAAGTATAATCATTTGGATGACATAAAGGAAGCATGTAGTGGGACAGAAGGACAACAGCTGGATGCTGTGAGGGGAAATTTTGAAGAAGATGACATGGATGTAAAAATATCAAGATCCTCCTCAAAGGGCCCAACGAAGAGAAGTAAAAGAGTTCCGTTTGGAGCTGATGATGAATCAGCCTTTGATGCGCTGCAAACACTGGCAGATCTGTCTTTGATGATGCCAGAAACAACTGTTGACACTGAGTCATCTGGCATGGTCAAGGAAGAACATACTATGGACAAGTCTAAAATAAAAGGAAGCCATTGCATTGCTGGAGCTGAAACTGCTGCTTTGAAAAGGAATAAAATGGGAAAAGCTTCTGACCACAGTGTTGATGCTATTCCTGTAGCAAAGGAGGGACTAGATCAGTCTAGTTCTAGCACTCAAAAACGAAAGCTGAAGCCGTCACCATCTAAGTCATGGATGTCAAATGATGATGCTCATGCTGATTCTCTTCTGAGTGAGTCTAGGAAGAATGAGGATAAAGAAGAAGTAAAGAAGTCTATTAGTAAAGGTAAACGATCCTCTCATACTGCTGGACCTGCAAAGGCTGGGAAATGGGTAAAGAATTCAGAAAATGCATTTTCAAATACTGGGCTTGTAAAGGAAGAAAATGCGGCACCGATTTCATCTGAAAACCTGATTAACTTAACTACAAAGATTGGGAGAGAAAGGAAGACGGACTTGCCAAAGCCACATAGTCAGAAGAATTCAAATGTTTCTGAAAATATTGCATTTGACCTCCATCAAAAATTGCTTGCTGTTAAGGAAAGACTTTCACATTGCCTATCTTCAGGCCAGTTGCGGAGATGGTGTACCTTGGAGTGGTTCTACAGTGCAATTGACTATCCATGGTTTGCTAAATGTGAGTTTGTAGAGTACTTGGATCATGTGGGATTGGGGCATGTTCCTCGATTAACTCGTGTTGAATGGGGGGTCATCCGAAGTTCCCTTGGAAGACCGCGAAGATTTTCTGTGCAATTTTTGAAAGAGGAAAAACAGAAGCTTAATCAGTATCGAGAATCTGTTAAGAAACATTATGCCGAACTTCGTTCTGGGACCAAAGGACTTCCAACTGATTTAGCTAAGCCTTTATATGTTGGACAACATGTTATAGCTGTACACCCAAGTACTAGGGAGATTCATGACGGAAGCATTTTGACAGTTGACTACAACAGGTGTAGGGTTCAGTTTGACATGCCTAAACTTGGTGTTGAGTTTGTTACGATAGCGCTCTACAATATTTTCTTTTTTTTCTTGAATTTTGATATTAATTGTATGCCATCAAATCCATTTGAAAACATGCCTGCATCTCTTACAAGGCATAACCTCTCATTGGATGAAATTCTTGGTATTGGGAACCACCTCAGTGATCACAAGATTATTGTCCAACAGAAAGAAGGAAAGACTGATGATCATATGAATTCTTTCCCGATTGAGGAACTGGAAAGCCCTGATGATCCAATCTTCATGATTCCAACACCTCATAACATCAGAAAATTTTTAAGGCAGAAAAAGATTATTTTACAGAAGTACATAAAGATGCATGTTCAACCGTTTTTATTGGTTAAAAAGTATGATTCTATTCAGAAATATTGTGGAAAAAAAAGTTCTGATTTTAATAAGGAGAAACCTTGCTCTAGTTCACAAACAAAATATGGACCCGGTAAGATGTCTAATACTCAACACGCCACTAATCCTCAGTACTCTGTATTTGCACAAATTCAAACAAAAGAAGCTGACATCCAAGCTCTATCTGAGTTAACCCGTGCACTTGACAAGAAGGACGCTGTGGTGTCTGAATTGAAACGAATGAATGACGAGGTATTGGAAAATCAGAAAAATGGAGACAGCTTACTCAAGGACTCTGAACATTTTAAGAAGCAATATGCTGCTGTCCTCCTACAGTTAAATGAAGTCAATGTGGAAGTTTCTTCAGCTCTGTTTTGCTTACGAAAGCGGAATACGTATCAAGGGGCTACAACCATGTTGTTGAAGCCACTGTCTGATTTAAGTGGTCCTAGTCTTCTAACTCAAGAACCTGCCGGATCTCATGTAGGTGACATTGTTGGAATTTCAAGAACAAATGCGCGAGAAATGGTTGATGCGGCTATCAAGGCAGTTGCAACTATGAGAAAAGGAGAAAATAATTTTGAGAGTATTGAAGATGCGATAGATTTTGTAAACAATAGACTTTCAGAAAATGATTCGGCCTTACCAGCCATGAAATCTACTACTGCAGATTCAAGCCAGGCAAATTTGACCACACAGAATCCTATGAATCCGTCAAATTCATTAGCAACTAGCCATGTTGAAGATCCCAAGAGAAATGGTTCATATGATCAAAGTGACGCAGAGATCCCTTCAGAACTTATAGCTCACTGTGTATCTACTTTACTCGTGATTCAGAATTTTGAATTTGTTTTAGGGCTTTTAGAGGCTATTGCATTTCCTGGTTTAGTTAGTAAAATATTACGGAAAAATTTTACTGCAACTCACCTTATATTCCGTGCATGTTTCTTTGTTGTTATTCTTCATTATTATAAGTGCACAGAAAGGCAATTTCCGCCTGCTGATGTTGCTCAGGTATTAGATTCAGCTGCTAATAGTCTGCAGCCGAGATGCTCTGAGAACCTCCCAATATACGCAGAAATACAGAAATGCATGGGAATTATTAGGAGCCAGATACTTGCGCTCGTACCCACTTAG 3876 41.15 MSRSWSPVVPRSRSPVVPRSQSPIVPQSRSPIVPQSRLPVLPRSQSPILLDLNRQSPLVGWLWIFDHAVERKSIQKRKFSDMLGPQWNKEELKRFYEAYRKYGRDWKKVAAIVGNRSVEMVESLYTMNRAYLSLPEGTASIVGLVAMMTDHYCVLGGSDSEQESDEGLGALQNPQKRARGKLRNNVSKISSGSVDDVTLSQSLASTDGCLSLLKKRRSGMKPHAVGKRTPRVPVSYSCDKERETYFSPARLGLKLKAHANSDEDVAHEIALALTKASQRDGSSQLSQTPNQKFEVPVLPPFLSGVRMRSESEMTSAKLRCSEMDEGGCELSFGSTGADYERAKKSCTVRRGRAVAFEAQKKGNRYNVKKQKDEENKYNHLDDIKEACSGTEGQQLDAVRGNFEEDDMDVKISRSSSKGPTKRSKRVPFGADDESAFDALQTLADLSLMMPETTVDTESSGMVKEEHTMDKSKIKGSHCIAGAETAALKRNKMGKASDHSVDAIPVAKEGLDQSSSSTQKRKLKPSPSKSWMSNDDAHADSLLSESRKNEDKEEVKKSISKGKRSSHTAGPAKAGKWVKNSENAFSNTGLVKEENAAPISSENLINLTTKIGRERKTDLPKPHSQKNSNVSENIAFDLHQKLLAVKERLSHCLSSGQLRRWCTLEWFYSAIDYPWFAKCEFVEYLDHVGLGHVPRLTRVEWGVIRSSLGRPRRFSVQFLKEEKQKLNQYRESVKKHYAELRSGTKGLPTDLAKPLYVGQHVIAVHPSTREIHDGSILTVDYNRCRVQFDMPKLGVEFVTIALYNIFFFFLNFDINCMPSNPFENMPASLTRHNLSLDEILGIGNHLSDHKIIVQQKEGKTDDHMNSFPIEELESPDDPIFMIPTPHNIRKFLRQKKIILQKYIKMHVQPFLLVKKYDSIQKYCGKKSSDFNKEKPCSSSQTKYGPGKMSNTQHATNPQYSVFAQIQTKEADIQALSELTRALDKKDAVVSELKRMNDEVLENQKNGDSLLKDSEHFKKQYAAVLLQLNEVNVEVSSALFCLRKRNTYQGATTMLLKPLSDLSGPSLLTQEPAGSHVGDIVGISRTNAREMVDAAIKAVATMRKGENNFESIEDAIDFVNNRLSENDSALPAMKSTTADSSQANLTTQNPMNPSNSLATSHVEDPKRNGSYDQSDAEIPSELIAHCVSTLLVIQNFEFVLGLLEAIAFPGLVSKILRKNFTATHLIFRACFFVVILHYYKCTERQFPPADVAQVLDSAANSLQPRCSENLPIYAEIQKCMGIIRSQILALVPT 1291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8342666 8355270 - BLOR10245 Blo02g00515 56745

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00515 1291 MobiDBLite consensus disorder prediction 932 950 - -
Blo02g00515 1291 SMART DIRP_2 666 766 IPR033471 -
Blo02g00515 1291 PANTHER PROTEIN ALWAYS EARLY 1-RELATED 1233 1291 IPR028306 -
Blo02g00515 1291 MobiDBLite consensus disorder prediction 507 578 - -
Blo02g00515 1291 MobiDBLite consensus disorder prediction 1131 1172 - -
Blo02g00515 1291 MobiDBLite consensus disorder prediction 458 472 - -
Blo02g00515 1291 MobiDBLite consensus disorder prediction 1 38 - -
Blo02g00515 1291 Pfam DIRP 665 765 IPR033471 -
Blo02g00515 1291 PANTHER LIN-9 70 1193 IPR010561 GO:0006351|GO:0017053
Blo02g00515 1291 PANTHER LIN-9 1233 1291 IPR010561 GO:0006351|GO:0017053
Blo02g00515 1291 Pfam Myb-like DNA-binding domain 86 123 IPR001005 -
Blo02g00515 1291 MobiDBLite consensus disorder prediction 509 538 - -
Blo02g00515 1291 MobiDBLite consensus disorder prediction 1131 1161 - -
Blo02g00515 1291 MobiDBLite consensus disorder prediction 409 428 - -
Blo02g00515 1291 PANTHER PROTEIN ALWAYS EARLY 1-RELATED 70 1193 IPR028306 -
Blo02g00515 1291 MobiDBLite consensus disorder prediction 453 472 - -
Blo02g00515 1291 ProSiteProfiles SANT domain profile. 82 119 IPR017884 -
Blo02g00515 1291 MobiDBLite consensus disorder prediction 927 950 - -
Blo02g00515 1291 Coils Coil 974 997 - -
Blo02g00515 1291 CDD SANT 87 121 IPR001005 -
Blo02g00515 1291 Gene3D - 66 139 - -
Blo02g00515 1291 SMART sant 83 131 IPR001005 -
Blo02g00515 1291 Coils Coil 715 738 - -
Blo02g00515 1291 MobiDBLite consensus disorder prediction 539 560 - -
Blo02g00515 1291 SUPERFAMILY Homeodomain-like 85 131 IPR009057 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00515 - - - bhj:120080265 1244.95
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00515 Blo-Chr2:8342666 Blo11g00505 Blo-Chr11:4636700 1.82E-10 dispersed
Blo02g00515 Blo-Chr2:8342666 Blo07g00179 Blo-Chr7:2240811 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g335 . . . . . Bpe14g01136 . . . . Cma06g01485 Cma14g01632 Car06g01277 Car14g01458 . Cpe08g00199 Cpe03g01374 Bhi01g00974 . . . Hepe05g1463 . . . . . . . . . . . Cone7ag0162 Cone4ag0158 Lsi05g01524 . . Cme06g00712 Blo02g00515 . Bda11g00533 Bda13g00178 . Bpe13g00656 . Bma06g01509 . Cmo06g01480 Cmo14g01669 . . . . . . . . . . . . . Cla05g00634 Cam05g0695 Cec05g0708 Cco05g0704 Clacu05g0690 Cmu05g0657 Cre05g0729 . Csa03g01442 Chy06g00683 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003565 1 5 2 1 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 2 1 1 1 1 4 1 2 46
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12026 PF06584 DIRP 4.00E-28 No_clan Blo TF