Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00526 ATGTTTTTTGAGATTTTGTTGAGACCCTTTTGCTTAAATTTTGGAGGGCTTTTGAATGTAGCCAGTAGTCTTGTTTCTGATCAGAATGTACATCTGGATATTCAGTTGCTGGCACAAGAAATATGCCGAAGCAAATCTGTCTTACTTTCTTCTGGGTTTAATGCTCTTCCTCCACAGTTCGTAGAGATAATGAACCAGATGAGATTATCGTGGAATTACAATGTTTTTTATGCAGACATGGATGCGAAAGTAAAAGCCATGATAAAGCTTATTGAAGAAGATGCAGATTCTTTTGCGAGAAGGGCCGAAATGTACTACAAGAAAAGGCCAGAGCTCATGAAATTGGTTGAGGAAATTTACAGAGCTTACCGTGCGTTAGCAGAGAGATACGATTATGCGACTGTGGAGCTTCGTCAAGCCCATCGAACGATGGCAGAAGCATTTCCAAACCAAGTCCCTTGTGATCTGCTTGATGATTCACCCTCTGAAACTTCTGCTGCTGGACCTGTAGAACCCCATTCTCTTGAAATACTGCATCCAATTCATTCATTATGCGAACTCAATGACTCGTCAACTAGCACGGATGGATCGGGCTATGGACCTAGCAAAAGGGGCCTAAGACAACTCGACGAAGATGCATTTTCTCAGTTAGCGTGCCAGAACCAGAATCTCAAGCTTCGTGCCGAAAAATCAGAAACAGAAATTCAAAATATCAAAGAAATGTTGGCAAAAACAGAAGCTGAGAAAGAAGCTATTTTGGTTAAGTACCAGCAGGCCTTAGAAAAATTATCCGATCTGGAGAGGGAACTGGACGTTGCCCAAAAAGAAGCTGCAGGGCTTGATCATCGTGCGAGCAAGGCAGAAATCGAGATGAAAATATTGAAGGAAGCTCTTTCGGGAATCGAAGCAGAAAGGGATGCAACTTTTCTTCAGTATAATCAGTCATTGGAAAGGATATCTACCCTCGAGAATTTACTCTCTCTTTCTCAGGAAGAAGCTAAAGCACTTGATATAAGAGCTAGTAAAGCAAAAACTGAATCTCAATATCTCAGATTACAGCTTTCGAGTTTAGAGTGTGAAAAGGAAGACAATTTTCGTCAGTATAAACTGTGTTTGGAGAAGATATCTCTTATGGAGGCTAAGATTTCTACTGCTGAGGAAAATGCAACCGTACTGAATGAACATATAGTAAGAGCAGAATCTGAAGTAAATGCATTAAAGGAGACTATCAATGAGCTGAACAAAGAGAAAGAAACAGCATCTCTCCAATACCACGAGTGCTTGGACGCAACGGCTAAGATGGAGAGTGAAATTGCCCGATTTGAAAATGATGCGAAACAACTAAATGGCAAACTTCTAACAGTCGCTAAAAAGTTGGACAGTGCAGAAGTAAAATGTTCTCAATTGGAGGAATCAAATCGAGTTCTGCGGTTAGAGGCAGACAATCTGATGAGGAAGATCACGATGAAAGATCAAGAACTTGCTCAAAGGCATGATGAACTCAAGAAATTCCAGATTCAAATCCAAGATGAGCAGTCGCGGTTTACGCAAGTTGAAAGCACTCTTCACGCATTACAAAAGTTGCATTCTCAATCTCAAGAGGAGCAGAAAGCTCTTTCATTGGAGCTTAAAAATGGTCTTCAGATGTTGAAGGATTTGGGATCTCGCAATCTTTGTGTGGAGGAAGAACTTCAAAAGGTCAAGGAAGAAAATAGGAGCCTGAATGAATCAAATTTGTCTTCGAATATTTCGGTGAAGAATCTAGAGAATGAAATTTTAAGCTTAAAGGAGATAAAAGACAAACTCGAAGAAGAGGTATTCCGAAAAGCAGAATATAGCAATGCCCTTGAGCAGGAAATTCACCGTTTAAGAGAGGAAATCAAGGGCATGAATGGAAGATACCAGGCCATAATGATGCAGGTTGAATCTGTAGGTATGAATGTGGAATGCTTCATGTCTTCTGTAAAGGAATTGCAAAATGAGAATGCAAAGCTTAGAGACACCTGCAAGATCGAGTGTAACAAAGGAGAAGTTCTTTACGAGAAGTTGAATTCTATGGAAAAAACTTCAAAAGACAATGCAGTTCTCGAGAAGTCTTTAGCGGAAATGCATGGTGAGTTGGAAAAGCTAAGGGAAAAGGCAAAGGACTTTCAGGAGTCATGCCATTTTCTTCAGGGAGAAAAAACCGCTCTTGTTGCTGAAAAGGCCACCTTGCTGTTACAGCTGCAGATCATTACTGGAAATATGCAGAAGCTCTTAGAGAAGAACACCTCACTGGAAAATTCCTTATGCGGTGCAAACTCCGAGCTTGAAGGTCTGAGGGGTCATTCAAAGAGCTTAGAAGAATTCTGCCAGTTACTGAAGAGTGAGAAATCTACCATTCTCAGTGAAAGAGATGGCTTGGTATCTCAGTTGGAAAGCGTTGAACTGAGGCTGGGAAATCTTGAAAAAAGATTTTCAAATCTCGAAGAAAAGTATACTTCCTTGGAAAATGAAAACGAGGCAACGCTCAATCAAGTGGAAGAATTAAGGTCTTCCCTTGTTTCCCAAAAAGAAGTGCATGCAAGTTACAGGACGTTAAATGAGACCAAATTGTCGGGCTTGGAAACCCATATTCATATCTTGCAAGAAAACAGTAGAATGGGCAAGAAAGAATTTGAAGAAGAACTAGAGAAGGCTGTCAATGCTCAGGTAGAGATCTTCATCCTCCAAAAGTTTGTGGAAGATTTGGAGGGGAAGAATTATTTGCTGGTTATCGAATGTCAAAAGCTCAATGAGGCGACCAAATTGTCAAATAAACTGATCTCAGAGTTGGAGCGTGAAAATCTTGAGCAGCAGGTGGAAATAGAATTCCTGGTGGATGAAATTGAAAACTTAAGAGGTGGGATTCATAGAGTGTTTAAGGCTCTTCAACTCAATCTTGAAAATGGACACAAAGATAAGATTGAGAGAGAGAAACTTCCTCTGTTGAATGTTTTGGAGACAGTTGAGGAATTAAAAACTTCTTTGCTCAGAAACAAGGATGAGATGCAGCAGCTGCTGGTTGAGAACTCAGTGCTCTTAACTTTGCTTGGGCAACAGAGATTAGAGGGTCAAGAACTTCAGGCAGAGAAAATTTTTCTCGAAAACGAGTTTGAAATCCTGAAAGCAGAGTTTGCTTTGAATGAAAAAGACAAACATGATCTGTTAGAGAAGACAAAGCAATTGATGTTTGAAATTACCCAGAAAGAGCAGCATGAGAAATTCTTGGAGGGTGGAATCCAAATTCAAAATCTCAAGTTGGAAAATTTGAAACTTGATTACCTTGCGTTACAGGAAGAAAATTCAGATATGCTTAAAGAAAAGAGGTCTGGGCGAGAGAAATTTTTGGAACTCAAAGAGGCAAATCATATTCTTGAAGAGGAACATAGAATAATCAGTGAAGAAGCTGTAGCACTCAGCATATTCTCTTTAGTCTGTGAAAGCTTCACAGCAGATAAAGCTGTAGAAATGAAAGCACTTAATGAAGATCTCAATCTTCACCATGTGGCCAATAGCGAACTGGAGGGCGAGGTCAAGGAGATGGCAGAAGCATTGTTAGTGAAAGAAACGGAAATTCTCCAATTGAACCAGTCAGTTAAGAAGTTGATGGAGGAGCTGCATGAAGTCCAAAACTCTAATGATCTTCTAACCCATGAAATTGTAACTGGAAATAATTTTGTCAGACAGAAAGTAGAAGAGCTGTCACAAACAGAGCAAGAACTGAAGGATGTGCAGGAATTAAATATGAAACTGTACAATGAAGTTGAGGAACTGAAGACGGAATGCAAAGGGTCAACTTTGCTTCGAGAAAATCTAGAAATTGAGAATCTTGAACTTTGCATGAATGCCCACAGTTTGAATGATGAAATCACTTGGCTCAATGAAACAAATGACAATTTGAGATCCGAGGTTGGCGTTTTGAACAAGGAAGTTGAAGAATGCAGGATTAGGGAGGAAAACCTCAGTTCAGAGCTTCAGGACAGAAGAGATGGGTTCCAACTATGGGAAGCTGAAGCCGCTTCGTTTTATTTTGATCTTCAAATCTCGTCCGTTCGTGAGGTCTTCCTCGAAAATAAGCTGCACGAACTTACTCAAGTCTGTGAGAAGCTTGGAGGTGAGAGAGCGGCAAAAGATGTGGAGATTCAAAGTCTGCGAGAAAGCATTGTGTCCATGGAAAGTGAAATGGGAGGACTGAAGGCCCAGTTCTCCACATACTTACATGATACGACTTCTTCGAAAGAGAATGTAGAAGTACTCGAACACTATGTTCTTCCCCAAACTAAGCTTTTCTCTGGTGGAATTCAAGAAGAAATGGATCATGAAAACACAGCTCTGTTCAACAAGATGGGGGCTAGGACTAAAGAACTTGAAGAGCTAGACGAAAAAGAAAAAGAAACTATGGCCAACCGAGGAACTTTGAACACCCACGTTGAAGCAAGAGGTGCAATGAAACAGATGAAAGAGTTCATATCAGAGGGGACCTCAGATCATGAAGTCACAAAGAATGAATCGATGGCATTTGGGACTGGGTTTGATCAGATTCTGAAGCCGCGTGCAAAAAGATCAGAAAATGGGACATTAATGAAAGACATCCCTCTTGATCAAGCCTCTGATTTTTCGTTCCACAGAAAAAGCAAAAGGGGGAACCTTGATTTGAACAACCAAATGCTTCAATTGTGGGAAACTGTGGAGCTGAACATCGGCCAGCATCAAACAGCCAATGAAATGCAGAAGCTGGCCATCTTACCCCTCGAAAACGATCAGAACAAATTTGAGGAAAAAAAAGATTCAGACTCTTCGTCAGAATTACAAATAGAGAAGGAATTGGGTGTTGACATGCTAGAGAGATCCTCAAGCATCAGAGAACGAAGTCAAGGAGGTAAAAGGAGAAAGATTCTACAGAGGCTTGCTTCAGATGCTCAGAAATTGACAAATCTTCAATCAACAGTTCATGATTTGAAGAAGAGACTGGAGAAGAAAAATTGGAGCAAGAAGGAAAGCAGCATTGAATATGAGAAGGTTTGTATACAGGTAAAAGAAGTTGAAGAGACTATCATTCAGCTGGTCAATGTGAATGATCAATTGACAAAGAATGTAGAACACAGCCCCTCGTCTCTGGCCGGGAAAACTGCATCGGAGTTGGAGAGTGAAAATGTCGCTAGAAATAGCGTGATGGAAAGGGCTCGAAAAGGGTCTGAAAAGATCGGAAGATTGCATTTTGAGGTGCAGAACATTCAGCTTATCTTGATAAAATTGGAAGAAGAGAAGAGAAGAAAATGGAAGACAAGATTTTCCAAGAACAAAACGGGCGTCATATTGAGGGACTTCATTTACAGTAGCAGGAAAAAGAGTGAAAAGCAGCAGCAGCAGAAGAACTGTTTCTGTGGGTGCAACAGAGATTCAACTGACGAAGATTGA 5439 40.54 MFFEILLRPFCLNFGGLLNVASSLVSDQNVHLDIQLLAQEICRSKSVLLSSGFNALPPQFVEIMNQMRLSWNYNVFYADMDAKVKAMIKLIEEDADSFARRAEMYYKKRPELMKLVEEIYRAYRALAERYDYATVELRQAHRTMAEAFPNQVPCDLLDDSPSETSAAGPVEPHSLEILHPIHSLCELNDSSTSTDGSGYGPSKRGLRQLDEDAFSQLACQNQNLKLRAEKSETEIQNIKEMLAKTEAEKEAILVKYQQALEKLSDLERELDVAQKEAAGLDHRASKAEIEMKILKEALSGIEAERDATFLQYNQSLERISTLENLLSLSQEEAKALDIRASKAKTESQYLRLQLSSLECEKEDNFRQYKLCLEKISLMEAKISTAEENATVLNEHIVRAESEVNALKETINELNKEKETASLQYHECLDATAKMESEIARFENDAKQLNGKLLTVAKKLDSAEVKCSQLEESNRVLRLEADNLMRKITMKDQELAQRHDELKKFQIQIQDEQSRFTQVESTLHALQKLHSQSQEEQKALSLELKNGLQMLKDLGSRNLCVEEELQKVKEENRSLNESNLSSNISVKNLENEILSLKEIKDKLEEEVFRKAEYSNALEQEIHRLREEIKGMNGRYQAIMMQVESVGMNVECFMSSVKELQNENAKLRDTCKIECNKGEVLYEKLNSMEKTSKDNAVLEKSLAEMHGELEKLREKAKDFQESCHFLQGEKTALVAEKATLLLQLQIITGNMQKLLEKNTSLENSLCGANSELEGLRGHSKSLEEFCQLLKSEKSTILSERDGLVSQLESVELRLGNLEKRFSNLEEKYTSLENENEATLNQVEELRSSLVSQKEVHASYRTLNETKLSGLETHIHILQENSRMGKKEFEEELEKAVNAQVEIFILQKFVEDLEGKNYLLVIECQKLNEATKLSNKLISELERENLEQQVEIEFLVDEIENLRGGIHRVFKALQLNLENGHKDKIEREKLPLLNVLETVEELKTSLLRNKDEMQQLLVENSVLLTLLGQQRLEGQELQAEKIFLENEFEILKAEFALNEKDKHDLLEKTKQLMFEITQKEQHEKFLEGGIQIQNLKLENLKLDYLALQEENSDMLKEKRSGREKFLELKEANHILEEEHRIISEEAVALSIFSLVCESFTADKAVEMKALNEDLNLHHVANSELEGEVKEMAEALLVKETEILQLNQSVKKLMEELHEVQNSNDLLTHEIVTGNNFVRQKVEELSQTEQELKDVQELNMKLYNEVEELKTECKGSTLLRENLEIENLELCMNAHSLNDEITWLNETNDNLRSEVGVLNKEVEECRIREENLSSELQDRRDGFQLWEAEAASFYFDLQISSVREVFLENKLHELTQVCEKLGGERAAKDVEIQSLRESIVSMESEMGGLKAQFSTYLHDTTSSKENVEVLEHYVLPQTKLFSGGIQEEMDHENTALFNKMGARTKELEELDEKEKETMANRGTLNTHVEARGAMKQMKEFISEGTSDHEVTKNESMAFGTGFDQILKPRAKRSENGTLMKDIPLDQASDFSFHRKSKRGNLDLNNQMLQLWETVELNIGQHQTANEMQKLAILPLENDQNKFEEKKDSDSSSELQIEKELGVDMLERSSSIRERSQGGKRRKILQRLASDAQKLTNLQSTVHDLKKRLEKKNWSKKESSIEYEKVCIQVKEVEETIIQLVNVNDQLTKNVEHSPSSLAGKTASELESENVARNSVMERARKGSEKIGRLHFEVQNIQLILIKLEEEKRRKWKTRFSKNKTGVILRDFIYSSRKKSEKQQQQKNCFCGCNRDSTDED 1812
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8659444 8665594 - BLOR10256 Blo02g00526 56756

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00526 1812 Coils Coil 431 451 - -
Blo02g00526 1812 Coils Coil 648 675 - -
Blo02g00526 1812 Coils Coil 798 846 - -
Blo02g00526 1812 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 56 137 IPR011684 GO:0003779
Blo02g00526 1812 Coils Coil 1031 1051 - -
Blo02g00526 1812 Gene3D - 680 865 - -
Blo02g00526 1812 Coils Coil 1231 1324 - -
Blo02g00526 1812 Coils Coil 613 633 - -
Blo02g00526 1812 Coils Coil 585 605 - -
Blo02g00526 1812 Coils Coil 921 955 - -
Blo02g00526 1812 Coils Coil 1388 1408 - -
Blo02g00526 1812 Coils Coil 1192 1226 - -
Blo02g00526 1812 Coils Coil 993 1016 - -
Blo02g00526 1812 Coils Coil 693 727 - -
Blo02g00526 1812 PANTHER PROTEIN NETWORKED 1D ISOFORM X1 211 1812 - -
Blo02g00526 1812 PANTHER PROTEIN NETWORKED 1D ISOFORM X1 78 194 - -
Blo02g00526 1812 Pfam KIP1-like protein 78 131 IPR011684 GO:0003779
Blo02g00526 1812 Coils Coil 1087 1114 - -
Blo02g00526 1812 Coils Coil 550 577 - -
Blo02g00526 1812 Coils Coil 382 423 - -
Blo02g00526 1812 PANTHER PROTEIN NETWORKED 4A 211 1812 - -
Blo02g00526 1812 PANTHER PROTEIN NETWORKED 4A 78 194 - -
Blo02g00526 1812 Coils Coil 1685 1705 - -
Blo02g00526 1812 Coils Coil 459 486 - -
Blo02g00526 1812 Coils Coil 214 304 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00526 - - - qsu:111998448 1693.32
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo02g00526 Blo07g00230 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00526 Blo-Chr2:8659444 Blo05g00374 Blo-Chr5:4475287 0 dispersed
Blo07g00552 Blo-Chr7:14919958 Blo02g00526 Blo-Chr2:8659444 8.34E-19 transposed
Blo02g00526 Blo-Chr2:8659444 Blo07g00230 Blo-Chr7:2855471 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g541 . . . . . Bpe14g01206 . . . . Cma06g01386 Cma14g01737 Car06g01195 Car14g01566 Sed02g1335 Cpe08g00276 Cpe03g01456 Bhi01g00773 Tan10g0800 Cmetu06g0678 . . . . . . . . . . . . . . . Lsi05g01629 . . Cme06g00583 Blo02g00526 Blo07g00230 Bda11g00592 Bda13g00105 . Bpe13g00592 Bma02g00829 . . Cmo06g01392 Cmo14g01776 . . . . . . . . . . . . . Cla05g00517 Cam05g0568 Cec05g0580 Cco05g0578 Clacu05g0565 Cmu05g0536 Cre05g0605 . Csa03g01300 Chy06g00554 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003822 2 2 2 1 2 1 2 1 1 1 1 1 4 1 1 2 1 2 2 1 1 1 1 1 1 1 1 3 1 2 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo02g00526 Blo_Chr02 FPKM 8.10522 7.11956 12.6059 10.659698 7.038065 7.662962 8.309834 16.251677 15.242188 15.760742