Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00576 ATGCCTAGCAGAAAAGCTGATAAAACTTCAGACACAGCCCCTTCCCATCCCTTCGAAGGATTGCAAGCGTATGATTTTGTGAAGATGCCCAAGGAGCAAATGGACACATTAAAAAATAGAATTGCTGCCATATTTAATGGAAACACTAGTATTGTGGAGAAGCAGAACGTGATCAAATATCTTCAGATGTTGATCAGCAATGCTGATGCAGCCAATGTGATGACCAATGGACCAATAATGCTCATGCTTGTTAAAATGCTCAAGCAGGCTAAAGTGTTGGCTCTGCGTGTTCAACTTACTTCACTAATTGGCTTGTTGATTAGGCATTCTACTTTTATAGAAGACAACTTGTCTAATTCTGGACTTCTAGGTTCACTTATTGATGGACTTAGAGACAAACAGGACAAAGTCAGGAGGTTTTCCATGGCTGCTTTAGGTGAGTTGCTATTCTACATATCCACTCAAAATAAGCATAACAGAGATACGAATAATTTGGAGTCCCCATCAAAAGAAAACAGATCTATGTCTAGCTGGCAGGTTTCAAATTCATTAGTTTCATTGGTATCATCAATTCTGCGAAAAGGGGAGGATGATGGAACTCAACTTTATGCATTGAGAACAATTGAAAACATTTGTAGTCAAGGAGGGCAGTGGGCTGCTCGTTTTACTAGCCAGGATGTAATCAGTAATTTATGCTATATATATAGGGCCCCAGGAAAACAAGAGAGCATGAGGCTCACCGCTGGATCATGTATAGTTCGCCTGGTTCGTTTTAGTCCTCCTAGCATTCAATCTGTCCTAGAAAAAACTCCTTTCAAGGACATTGCATCTACCCTCGTTAAGGGAAGTCCACGTGACCAACAAATTAGCTTAGACCTTCTGAACATGGCCATGCTTGGCAGTCAGATGTTAACAAATATTGGGAGATACCTTCTACCCTTAGCAGAAGATAAGAATCTTGTACCAAGCCTCATTTCCCTTATTGAGCAAGGAAGTGAAGTGGTCAAAGGAAAGACGCTTATTTTCGTGGCTCTTCTCTGTAAACATGGAAGGAGGTGGCTCCCACACTTTTTTTGCAATGCCAGGCTACTTTCTGCTGTGGATAGGCTGACAAAGGAGAAGGACAACTTTGTCCAGGAGTCTTTAAATACATTCGTGCAGGTTGTGGCGTCTATCTTACCAACTTTATTGGACACCATAGTCAGTGACATTCAGCAAATAATGGGGGGAAAGCGTCATGGACAGATTCCTTCCCTTGTTAGTCGAGCTGCTCCAAAGACTAGCTTCCATTTGTTTCCAGTTTTTCTTCATCTACTTGGGAGCTCATCTTTCAAGCGTAAGGTGGTTAGTCCTCAGGTACTGCAGCAGTTGGAAAATCTAATCAGGCTCGTTGAGACCCAGTTTCAGGGCAGGGATGATTTCCAAATATCACTTCTTCGAGTTCTTGAATCTGTCACGGAGGAGTCCGTAATTCTTGGAAGCCCATATACATTTATACATGGGATTCTCCCTAGTTTAGCTCTTCTATACAGGGGCAACAAAGATGGTGATGCTAGATTTTTGTGCCTGAAAATTATATTTGATGTGATGGTCATCTTTCTGCACGAATCAGTTATAGATGGGAAAAGATCAGAAGATTTGAAATCTATTGCTAATTTGCATTTGCTTCCTCTCTACCTCATCTTAATTGAAGACGAAGATCCCATTCCAGTATATGCTCAGAAGCTTCTCGTAATGCTCATTGAGTTTAATTTTATTAAAATCCCCGACATTTTGCATCTGAAAACAATCTCCCAATGCTTTGAGTTTTTGCTTGGCGATCTCTCAAATGCAAATGTAAACAATGTTAAGCTTTTTCTAGCCCTGGCATCTGCTCCCGACATGGAATCGAAGCTTCTCTCTCAACTAAAAGTAGTTAGGAGAATTGGAATCCTTCTGGAGTTTGTATATGCAAAGAATATGGAGGATTTCCTTGAACCAACTCTTGGCCTGTGTAGAGCCTTTCTTCTCCGTTCCGTAAGCAGTAGAAAAGGCTTTGTTTACTCAAACGAACCGGCTCTTTTGGGCGAAGGTTTTTCAGAGTCTAGTGGAGCAGTTGATCCTCAGCAATGTGTCAGAGATATATCAGATTTCGGCAGCAATGTGGGGGTCTTGTTAGAGTTGAGCGGGATCAACGACCCGTCAGTTACAGATATTGCTTCCGAATGTGTGGTATCATTGCTTAAGGCAGCTCCAAGAGAAACCACGACTGGTCTTCTAACTAATCTTCCAAAGGTTAGTGCAATCTTAGGGTCTTGGAGATCCATTTCGCACTTACTTCTTCGACGGGTGCTTCATGCTATTGGTTATTCTTGTCGACAGTACTTATCGCATGCAATGATGCTATCGATATCAATTCCTGAGATTTCTCGTCTTGAAAATAGTGTTTCTGAGCTAAAAAGTTCAGGTATACCTCGTTGCATTTGA 2466 41.52 MPSRKADKTSDTAPSHPFEGLQAYDFVKMPKEQMDTLKNRIAAIFNGNTSIVEKQNVIKYLQMLISNADAANVMTNGPIMLMLVKMLKQAKVLALRVQLTSLIGLLIRHSTFIEDNLSNSGLLGSLIDGLRDKQDKVRRFSMAALGELLFYISTQNKHNRDTNNLESPSKENRSMSSWQVSNSLVSLVSSILRKGEDDGTQLYALRTIENICSQGGQWAARFTSQDVISNLCYIYRAPGKQESMRLTAGSCIVRLVRFSPPSIQSVLEKTPFKDIASTLVKGSPRDQQISLDLLNMAMLGSQMLTNIGRYLLPLAEDKNLVPSLISLIEQGSEVVKGKTLIFVALLCKHGRRWLPHFFCNARLLSAVDRLTKEKDNFVQESLNTFVQVVASILPTLLDTIVSDIQQIMGGKRHGQIPSLVSRAAPKTSFHLFPVFLHLLGSSSFKRKVVSPQVLQQLENLIRLVETQFQGRDDFQISLLRVLESVTEESVILGSPYTFIHGILPSLALLYRGNKDGDARFLCLKIIFDVMVIFLHESVIDGKRSEDLKSIANLHLLPLYLILIEDEDPIPVYAQKLLVMLIEFNFIKIPDILHLKTISQCFEFLLGDLSNANVNNVKLFLALASAPDMESKLLSQLKVVRRIGILLEFVYAKNMEDFLEPTLGLCRAFLLRSVSSRKGFVYSNEPALLGEGFSESSGAVDPQQCVRDISDFGSNVGVLLELSGINDPSVTDIASECVVSLLKAAPRETTTGLLTNLPKVSAILGSWRSISHLLLRRVLHAIGYSCRQYLSHAMMLSISIPEISRLENSVSELKSSGIPRCI 821
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10599294 10602645 + BLOR10306 Blo02g00576 56806

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00576 821 PANTHER SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED 1 818 IPR044591 GO:0000911|GO:0000914|GO:0008017
Blo02g00576 821 Gene3D - 41 390 IPR011989 -
Blo02g00576 821 SUPERFAMILY ARM repeat 48 352 IPR016024 -
Blo02g00576 821 Coils Coil 360 380 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00576 K17545 ULK4; serine/threonine-protein kinase ULK4 [EC:2.7.11.1] - qsu:111997454 1203.73
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00576 Blo-Chr2:10599294 Blo03g01031 Blo-Chr3:36594367 0 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g370 . . . . . Bpe14g01152 . . . . . Cma14g01648 . Car14g01481 . . Cpe03g01392 Bhi01g00926 . . . . . Lcy11g1459 . . . . . . . . . Cone7ag0183 Cone4ag0178 Lsi05g01496 . . Cme06g00683 Blo02g00576 . . . . . . . . . Cmo14g01692 . . . . . . . . . . . . . Cla05g00610 . . . . . . . Csa03g01408 Chy06g00651 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009196 1 1 4 0 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 2 1 1 34
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo02g00576 Blo_Chr02 FPKM 23.106173 24.47373 20.46386 23.336571 28.682072 32.326321 28.546831 21.892735 23.17701 21.234795