Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00648 ATGGCTGCTGGCAAAGACATTGTTGAAGATTCTTTTTCAACCGTCAGCTTTCCAGAATCTTTACAGCAAAGCTATGATCTTTCCCCTGAAGATGTTGCTTGGATCGATTCTTGTCTTATCAAAGATGTGGAGGTTGATGGCACGCAATGGGATTCTCTTAAAGATGCTTTGTTAGACATCCTTAGTTCTCAGACTGAACCACTTGAATCTTCTGCTGGTACGGCTGCAAGTTTTCCCAGAGGAACTGATATAGAGATGCTTGCTCCGCCTGATGGGGAAGAGACGACCAATGTCACCAGAGGAAGTGATGATGATCTTCTTGTTTCCAACGATGGAGCTGCAACCAGAGGTGATGGCATTGAAGATATCTATGATTCAAACCCAAGTTTCACGGAAAGTCCATTTCTGCCAACATACAAGGATGAAATGGAAGAGACTAAAAATTTGGAATCAGAATCTATTTCGGAAGTTTCTGAGACAGAGCCATCAATCAATGATATTTTCAGAGTCTGGGATCTGAACTCTCCATCCGAGGATGGTGAACTTGTGGAGCAGTTGAACAAAGCCATGGGTGAAAGTCAAGTTGAATCCGCTCCTTCCACATTGGAAGATGCTAATGTATTGGAAGATCTGAAAGTAGAGTTCTTTGACGATTCAACCCTTTTGTTGGATGATCTAATACATGGCCTTGCAGACCTATCCCTAGATCAGAAAAGGTGGCCATGCATGCCCACCAAGGCATGTCCTCCAGCTGGGCAATATGCCCAGCAGGGTGGGGCCCCTTGGCCACTGAAGGCTAAAGGCTTTCTTCATGATCGGGTCTGGCGTGCCAGCCTGCCAAGCTTGGGAGCTAGGCTCGTGAGCTCACTCGCTGAGCTCGGGATCGGTGGGTTGGCGAGCTAG 903 46.73 MAAGKDIVEDSFSTVSFPESLQQSYDLSPEDVAWIDSCLIKDVEVDGTQWDSLKDALLDILSSQTEPLESSAGTAASFPRGTDIEMLAPPDGEETTNVTRGSDDDLLVSNDGAATRGDGIEDIYDSNPSFTESPFLPTYKDEMEETKNLESESISEVSETEPSINDIFRVWDLNSPSEDGELVEQLNKAMGESQVESAPSTLEDANVLEDLKVEFFDDSTLLLDDLIHGLADLSLDQKRWPCMPTKACPPAGQYAQQGGAPWPLKAKGFLHDRVWRASLPSLGARLVSSLAELGIGGLAS 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 15626772 15631417 + BLOR10378 Blo02g00648 56878

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00648 300 MobiDBLite consensus disorder prediction 65 97 - -
Blo02g00648 300 PANTHER OS02G0469000 PROTEIN 1 238 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00648 - - - vvi:100245210 162.155
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00648 Blo-Chr2:15626772 Blo04g00540 Blo-Chr4:4645704 2.01E-07 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g41 Blo02g00648 . . Bda08g00961 . . Bma05g00420 . . . . . . . . Cpe04g00101 . Bhi05g01257 . . . . . . Cla02g00486 Cam02g0495 Cec02g0495 Cco02g0501 Clacu02g0499 Cmu02g0494 Cre02g0827 . . . . . Csa07g00036 . . . . . . . Bpe05g00315 . . . . . . . . . . . . . . . . . . . . . . . . . . . Chy01g00745 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011943 1 1 1 1 1 1 1 1 1 1 1 1 1 0 0 1 1 0 1 1 1 1 1 1 1 0 1 3 1 1 28
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo02g00648 Blo_Chr02 FPKM 1.631476 1.86738 4.413116 5.993266 13.910605 13.285469 15.501005 3.860848 3.947132 4.160353