Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00658 ATGGCTACTCAGAGTTTGGTCCCCGTTTCCCTTTTGATCACCAGAAAACCCCTAGCGAACCCATCTTTACCTTTCTTCTCTCGCTTAACATATGTTTCGCATCACCATGAGAGCCGTCTTTTCGTTTCCCTGAAAAATACTATCATTGACCATGTCTCTGCGTACAACTCGGGCCCGAATGGAGGCTCCGTCTTTTATGATGGTGTGGATGACGAAAAGCCCCGCGAAGAGTGCGGTGTGGTTGGAATTTACGGTGAACGAGAAGCCTCTCGTCTGTGTTATTTGGCGCTTCACGCGCTTCAGCACCGCGGTCAGGAGGGAGCCGGTATTGTTTCTGTGAAAAACAACGTTTTTCAATCGGTTACCGGACTTGGTCTAGTTTCCGACGTTTTCGACCAGTCAATCCTCGACCAATTGCAGGGCGATTCTGCTATAGGGCATGTCCGCTACTCCACTGCTGGATCTTCCATTCTCAAGAACGTCCAGCCGTTCGTCGTGGGTTACGGATTTGGCTCCGTCGGGGTTGCCCACAATGGTAATTTGGTCAACTATCGTTCCCTGAGATCGAAGCTTGAGGACAAAGGTTCCATCTTCAATACTAGTTCCGACACAGAAGTGGTTCTCCACCTCATTGCAATTTCTAATCAAAAGCTTCTTCTTTTGAGGATTGTCGATGCATGCGAGCAGCTTGAGGGGGCATACTCCTTGGTTTTTGTTACAGAGGATAAGTTGGTAGCTGTGCGTGACCCTTTTGGTTTTAGGCCTTTAGTCATGGGTAGGAGAAGCAATGGAACAGTTGTTTTTGCCTCTGAAACTTGTGCACTTGATTTGATAGAGGCCACGTATGAAAGAGAAGTTTATCCGGGCGAGGTTGTGGTGGTTGATAAATCTGGCGTTCAATCTCTTTGTCTAATGGCTCATCCTCCACCAAAAGCCTGCATCTTTGAACACATATACTTCGCCCTTCCTAGCTCGGTTGTTTTCGGCCGATCAGTGTACGAGTCTCGCCTTGCTTTTGGGGAAATACTTGCAACGGAAGCCCCAGTTGACTGTGATGTCGTGATTGCAGTTCCAGATTCAGGTGTCGTAGCTGCGCTTGGCTATGCTGCCAAAGCAGGAGTGGCTTTTCAGCAAGGCTTGATTCGATCTCACTATGTGGGCAGAACTTTCATAGAGCCAACTCAGAAGATTAGGGACTTTGGAGTGAAGCTCAAGCTCTCACCAGTCCGAGCTGTTTTAGAAGGTAAGAGGATTGTGGTTGTAGACGATTCAATTGTGAGAGGAACCACTTCTTCTAAAATCGTCAGGTTGATCAACGAAGCCGGAGCAAAGGAGGTTCATATGAGGATAGCAAGTCCTCCAATTATAAGCTCCTGTTATTATGGAGTAGACACACCAAGCTCAGAGGAGTTGATTTCTAACAGGATGAGTGTTGAGCAGATCAGGGAGTTTATTGGGTCTGATTCGCTCGCCTTTCTACCATTCGATGGTTTGAAGAAGCTTTTAGGCAGTGATTACCCAAATTATTGCTATGCTTGTTTTTCTGGGCATTACCCGGTTGAACCCAGAAGGTTAAAGTGA 1581 47.19 MATQSLVPVSLLITRKPLANPSLPFFSRLTYVSHHHESRLFVSLKNTIIDHVSAYNSGPNGGSVFYDGVDDEKPREECGVVGIYGEREASRLCYLALHALQHRGQEGAGIVSVKNNVFQSVTGLGLVSDVFDQSILDQLQGDSAIGHVRYSTAGSSILKNVQPFVVGYGFGSVGVAHNGNLVNYRSLRSKLEDKGSIFNTSSDTEVVLHLIAISNQKLLLLRIVDACEQLEGAYSLVFVTEDKLVAVRDPFGFRPLVMGRRSNGTVVFASETCALDLIEATYEREVYPGEVVVVDKSGVQSLCLMAHPPPKACIFEHIYFALPSSVVFGRSVYESRLAFGEILATEAPVDCDVVIAVPDSGVVAALGYAAKAGVAFQQGLIRSHYVGRTFIEPTQKIRDFGVKLKLSPVRAVLEGKRIVVVDDSIVRGTTSSKIVRLINEAGAKEVHMRIASPPIISSCYYGVDTPSSEELISNRMSVEQIREFIGSDSLAFLPFDGLKKLLGSDYPNYCYACFSGHYPVEPRRLK 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 16665004 16666584 + BLOR10388 Blo02g00658 56888

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00658 526 SUPERFAMILY PRTase-like 313 522 IPR029057 -
Blo02g00658 526 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 78 301 IPR029055 -
Blo02g00658 526 CDD GPATase_N 78 328 IPR035584 -
Blo02g00658 526 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 78 519 IPR029055 -
Blo02g00658 526 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 67 523 - -
Blo02g00658 526 PIRSF Pur1 74 524 IPR005854 GO:0004044|GO:0009113
Blo02g00658 526 Gene3D - 337 501 IPR029057 -
Blo02g00658 526 CDD PRTases_typeI 340 466 IPR000836 -
Blo02g00658 526 TIGRFAM purF: amidophosphoribosyltransferase 78 519 IPR005854 GO:0004044|GO:0009113
Blo02g00658 526 Hamap Amidophosphoribosyltransferase [purF]. 77 518 IPR005854 GO:0004044|GO:0009113
Blo02g00658 526 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 67 523 - -
Blo02g00658 526 Pfam Glutamine amidotransferase domain 159 275 IPR017932 -
Blo02g00658 526 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 78 297 IPR017932 -
Blo02g00658 526 Pfam Phosphoribosyl transferase domain 350 447 IPR000836 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00658 K00764 purF, PPAT; amidophosphoribosyltransferase [EC:2.4.2.14] - zju:107426528 810.061
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00658 Blo-Chr2:16665004 Blo06g00079 Blo-Chr6:3089352 1.12E-08 dispersed
Blo02g00658 Blo-Chr2:16665004 Blo02g00660 Blo-Chr2:17039336 0 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g59 Blo02g00658 . . Bda08g00971 . . Bma05g00406 . . . Cma02g00358 Cma20g00802 Car02g00225 Car20g00687 . . . . . . . . . . . . . . . . . Cone12ag1199 Cone8ag1246 Cone3ag1203 . Lsi10g00425 . Chy11g00327 . . . . . . . . . Sed01g0252 Cmo02g00360 Cmo20g00810 . . . . Cpe16g00281 Cpe05g01298 Bhi10g01929 Tan05g1228 Cmetu11g1361 . Hepe08g0964 . . . . . . . . . . Csa02g01318 . Cme11g00452
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Blo17g00017 . 402 557 PRT Gene Family AT1G80050 73.7 1.1e-64 243.0
Blo03g00170 . 1 136 PRT Gene Family AT1G80050 77.2 8.2e-57 216.9
Blo02g01051 . 30 248 PRT Gene Family AT1G80050 51.6 2.1e-52 202.2
Blo18g00019 . 80 220 PRT Gene Family AT1G80050 70.2 2.7e-52 201.8
Blo17g00861 . 27 200 PRT Gene Family AT1G80050 60.9 2.7e-52 201.8
Blo17g00017 . 370 517 PRT Gene Family AT5G11160 83.8 5.3e-67 250.8
Blo17g00861 . 5 166 PRT Gene Family AT5G11160 58.6 2.1e-47 185.7
Blo03g00170 . 1 117 PRT Gene Family AT5G11160 76.1 5.2e-46 181.0
Blo18g00019 . 80 193 PRT Gene Family AT5G11160 75.4 4.1e-43 171.4
Blo17g00861 . 4 203 PRT Gene Family AT1G27450 70.5 4.2e-73 271.2
Blo17g00017 . 380 552 PRT Gene Family AT1G27450 69.9 4.0e-68 254.6
Blo02g01051 . 8 248 PRT Gene Family AT1G27450 53.9 2.5e-62 235.3
Blo03g00170 . 1 136 PRT Gene Family AT1G27450 77.9 2.5e-57 218.8
Blo18g00019 . 80 213 PRT Gene Family AT1G27450 69.4 6.1e-48 187.6
Blo02g00658 . 70 526 PRT Gene Family AT2G16570 81.7 1.9e-217 752.3
Blo02g00660 . 1 395 PRT Gene Family AT2G16570 84.8 2.7e-195 678.7
Blo02g00658 . 71 522 PRT Gene Family AT4G34740 83.4 1.0e-218 756.5
Blo02g00660 . 1 395 PRT Gene Family AT4G34740 85.3 1.4e-196 682.9
Blo02g00658 . 70 520 PRT Gene Family AT4G38880 72.4 2.1e-186 649.0
Blo02g00660 . 1 368 PRT Gene Family AT4G38880 74.3 8.7e-156 547.4
Blo17g00861 . 4 203 PRT Gene Family AT1G27450 70.5 4.2e-73 271.2
Blo17g00017 . 380 552 PRT Gene Family AT1G27450 69.9 4.0e-68 254.6
Blo02g01051 . 8 248 PRT Gene Family AT1G27450 53.9 2.5e-62 235.3
Blo03g00170 . 1 136 PRT Gene Family AT1G27450 77.9 2.5e-57 218.8
Blo18g00019 . 80 213 PRT Gene Family AT1G27450 69.4 6.1e-48 187.6
Blo17g00017 . 402 557 PRT Gene Family AT1G80050 73.7 1.1e-64 243.0
Blo03g00170 . 1 136 PRT Gene Family AT1G80050 77.2 8.2e-57 216.9
Blo02g01051 . 30 248 PRT Gene Family AT1G80050 51.6 2.1e-52 202.2
Blo18g00019 . 80 220 PRT Gene Family AT1G80050 70.2 2.7e-52 201.8
Blo17g00861 . 27 200 PRT Gene Family AT1G80050 60.9 2.7e-52 201.8
Blo17g00017 . 370 517 PRT Gene Family AT5G11160 83.8 5.3e-67 250.8
Blo17g00861 . 5 166 PRT Gene Family AT5G11160 58.6 2.1e-47 185.7
Blo03g00170 . 1 117 PRT Gene Family AT5G11160 76.1 5.2e-46 181.0
Blo18g00019 . 80 193 PRT Gene Family AT5G11160 75.4 4.1e-43 171.4
Blo18g00155 . 3 188 PRT Gene Family AT1G71750 61.9 6.5e-64 240.7
Blo03g01488 . 15 469 PRT Gene Family AT1G55810 82.9 3.9e-221 764.2
Blo03g00493 . 170 624 PRT Gene Family AT1G55810 83.6 8.6e-221 763.1
Blo17g00327 . 19 218 PRT Gene Family AT1G55810 59.2 2.2e-59 226.9
Blo17g00329 . 39 153 PRT Gene Family AT1G55810 84.3 1.8e-53 207.2
Blo03g00493 . 221 628 PRT Gene Family AT3G27440 76.0 2.5e-182 635.2
Blo03g01488 . 66 473 PRT Gene Family AT3G27440 73.8 2.0e-179 625.5
Blo17g00329 . 39 153 PRT Gene Family AT3G27440 77.4 3.3e-49 193.0
Blo17g00327 . 81 218 PRT Gene Family AT3G27440 70.3 2.8e-48 189.9
Blo03g01488 . 3 468 PRT Gene Family AT3G27190 74.9 1.3e-206 716.1
Blo03g00493 . 157 623 PRT Gene Family AT3G27190 73.7 1.6e-204 709.1
Blo17g00327 . 1 218 PRT Gene Family AT3G27190 77.2 1.4e-88 323.9
Blo17g00329 . 34 153 PRT Gene Family AT3G27190 84.2 9.3e-56 214.9
Blo07g01168 . 48 286 PRT Gene Family AT3G53900 75.0 1.6e-103 372.9
Blo03g00493 . 155 624 PRT Gene Family AT4G26510 83.9 1.9e-231 798.5
Blo03g01488 . 1 469 PRT Gene Family AT4G26510 83.1 3.1e-229 791.2
Blo17g00327 . 12 218 PRT Gene Family AT4G26510 63.3 1.6e-65 247.3
Blo17g00329 . 39 153 PRT Gene Family AT4G26510 86.1 6.5e-54 208.8
Blo03g01488 . 11 471 PRT Gene Family AT5G40870 74.8 1.9e-205 712.2
Blo03g00493 . 157 626 PRT Gene Family AT5G40870 73.0 2.7e-204 708.4
Blo17g00327 . 1 218 PRT Gene Family AT5G40870 78.4 6.2e-92 335.1
Blo17g00329 . 39 153 PRT Gene Family AT5G40870 87.0 1.6e-55 214.2
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005155 2 1 2 2 1 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 1 1 1 1 1 1 1 2 1 1 40
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo02g00658 Blo_Chr02 FPKM 6.109091 5.991228 9.111928 9.138314 33.239662 32.497066 36.042412 12.382069 11.433733 11.355724