Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00662 ATGTCGAAGGAAGTTGCTGAAGAGGCGCAGACTCAACAGAGCAAAGACTATGTCGATCCACCGCCTGCTGCGCTCCTGGACATGGCGGAGCTCGGTCAATGGTCCTTCTACAGGGCTCTCATCGCTGAGTTTATTGCTACAATTCTCTTCCTCTACGTCGGTATTGCCACTGTCATTGGAAACAACAAGCTACCCACCGGTAGTTGCGAAGGTGTTGGCTTGCTCGGCATAGCTTGGGCGTTCGGCGGCATGATATTCGTCCTCGTTTACTGCACCGCCGGAATTTCTGGTGGTCATATCAACCCAGCTGTGACGGTGGGATTGTTCTTGGCTAGGAAGTTATCTCTAATCCGGGCCATAGCTTACATAATTGCTCAGTGCTTGGGAGCCATCGTCGGAGTTGGGTTAGTGAAGGCCTTCATGACTCAGCCTTACGTCGATAATGGCGGCGGAACTAACCTCGTGCAACCAGGCTACAGCAAAGGTACAGCAGTGGGTGCTGAAATCATCGGCGCCTTTGTACTTGTCTACACTGTCTTCTCTGCGACTGACCCCAAAAGAAGCGCTCGCGACTCTCACGTCCCTGTTTTAGCTCCGTTGCCTATTGGATTTGCTGTGTTTATGGTTCACTTAGCTACCATTCCCATCAATGGCACTGGCATCAACCCAGCTAGAAGCTTAGGCGCTGCAGTGATCTACAACAAAGAAAAAGTCTGGAACGAACATTGGATCTTCTGGGTTGGTCCTCTAGTTGGGGCTCTGGCTGCGACAATATACCATCAGTACATTCTCAGAGCGGCTGCCATTAAAGCTCTGGGGTCCTTCCGTAGCAACCCTACCAAC 843 51.48 MSKEVAEEAQTQQSKDYVDPPPAALLDMAELGQWSFYRALIAEFIATILFLYVGIATVIGNNKLPTGSCEGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTVGLFLARKLSLIRAIAYIIAQCLGAIVGVGLVKAFMTQPYVDNGGGTNLVQPGYSKGTAVGAEIIGAFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPINGTGINPARSLGAAVIYNKEKVWNEHWIFWVGPLVGALAATIYHQYILRAAAIKALGSFRSNPTN 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 17327538 17328671 - BLOR10392 Blo02g00662 56892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00662 281 PANTHER AQUAPORIN PIP2-1 1 281 - -
Blo02g00662 281 CDD MIP 38 263 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo02g00662 281 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 281 IPR034294 -
Blo02g00662 281 Gene3D Glycerol uptake facilitator protein. 23 281 IPR023271 -
Blo02g00662 281 TIGRFAM MIP: MIP family channel proteins 42 259 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo02g00662 281 ProSitePatterns MIP family signature. 99 107 IPR022357 -
Blo02g00662 281 SUPERFAMILY Aquaporin-like 30 265 IPR023271 -
Blo02g00662 281 Pfam Major intrinsic protein 31 260 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo02g00662 281 PRINTS Major intrinsic protein family signature 167 185 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo02g00662 281 PRINTS Major intrinsic protein family signature 203 225 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo02g00662 281 PRINTS Major intrinsic protein family signature 81 105 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo02g00662 281 PRINTS Major intrinsic protein family signature 118 137 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo02g00662 281 PRINTS Major intrinsic protein family signature 243 263 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo02g00662 281 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00662 Blo-Chr2:17327538 Blo13g00500 Blo-Chr13:26328730 6.53E-159 dispersed
Blo02g00662 Blo-Chr2:17327538 Blo04g00573 Blo-Chr4:4927713 1.96E-162 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00662 K09872 - csin:114258065 474.167