Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00696 ATGGCGGTTTCTCGAATATGCATTTCCTTGTTTGTGGCCATGCTTCTCTTGCTTTTCGACGGCACAATGGGCAGGCTTCCCAACCAGCACATCTCTCATCATGTGAAAGCTATGAAGGAGAAGTTGCAAAGCTCGAGCAACAAGTCAATGGCTGCCAGGAGTATCCGAAACAGCTCAGAAAGGAGGAACCTTGGGTTTTTCTCCTGCGGAACAGGAAACCCAATCGACGACTGCTGGCGCTGTGATCCAAACTGGCACCTTAACAGGAAACGGCTGCCCGATTGCAGCATCGGCTTTGGGAGGAACGCCATTGGAGGCCGTGACGGCAGTTTCTATGTGGTCACAGATCCAGGTGACGAGGATCCTGTAAACCCAAAGATCGGAACACTGCGGCATGCGGTCATCCAAGATAGCCCTCTCTGGATCATATTCAAACAAGACATGGTGATTCGATTGAAACAGGAGTTGCTCGTTAATAGTTTCAAGACCATTGATGGGCGGGGAGCTGATGTGCACATAGCTAACGGGGCATGCATTACCATCCAGTTCGTGACCAACGTCATTGTCCATGGTCTCTCTATCCATGATTGTATACCCACAGGGAACGCTATGGTTAGAAGCTCTGAAACCCATGTGGGATGGAGAACAATGGCGGATGGGGATGCCATTTCCATTTTTGGGTCCAGCCACGTTTGGATCGATCATAATTCACTATCTAGTTGTGCTGATGGTCTTGTTGATGCCATTATGGGTTCCACTTCCATTACAATCTCTAATAATCACTTCAGCAACCACAATGAGGTGATGCTTTTGGGACACAGTGACACGTACACAAGAGACAAGCAGATGCAAGTGACCATTGCTTACAACCATTTCGGAGAGGGACTTATCCAAAGAATGCCAAGGTGCCGACACGGGTATTTTCATGTGGTGAACAACGACTACACTCACTGGGAGATGTATGCGATAGGTGGGAGTGCAGACCCAACCATCAATAGTCAGGGCAATAGATATGCTGCTCCAACCAACCCATTTGCCAAGGAGGTAGTAACGAAGAGGGTTGAAACAGACGAAAACGAGTGGAAGGGGTGGAACTGGAGATCAGAGGGAGATATGTTGCTGAATGGAGCCTACTTTACCCCATCCGGTGTTGGAGTTTCATCCAGCTACGCCAGGGCCTCAAGCTTAGGAGCCAAACCTTCTTCTATGGTGGGCTCCATAACATCTGCTGCTGGTGCTCTTTCTTGCGTCAAAGGCAACCCCTGCTAG 1269 49.25 MAVSRICISLFVAMLLLLFDGTMGRLPNQHISHHVKAMKEKLQSSSNKSMAARSIRNSSERRNLGFFSCGTGNPIDDCWRCDPNWHLNRKRLPDCSIGFGRNAIGGRDGSFYVVTDPGDEDPVNPKIGTLRHAVIQDSPLWIIFKQDMVIRLKQELLVNSFKTIDGRGADVHIANGACITIQFVTNVIVHGLSIHDCIPTGNAMVRSSETHVGWRTMADGDAISIFGSSHVWIDHNSLSSCADGLVDAIMGSTSITISNNHFSNHNEVMLLGHSDTYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTINSQGNRYAAPTNPFAKEVVTKRVETDENEWKGWNWRSEGDMLLNGAYFTPSGVGVSSSYARASSLGAKPSSMVGSITSAAGALSCVKGNPC 422
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 21029835 21032933 - BLOR10426 Blo02g00696 56926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00696 422 SMART amb_all 147 344 IPR002022 -
Blo02g00696 422 PRINTS Pollen allergen Amb family signature 393 416 IPR018082 -
Blo02g00696 422 PRINTS Pollen allergen Amb family signature 155 171 IPR018082 -
Blo02g00696 422 PRINTS Pollen allergen Amb family signature 299 318 IPR018082 -
Blo02g00696 422 PRINTS Pollen allergen Amb family signature 119 144 IPR018082 -
Blo02g00696 422 PRINTS Pollen allergen Amb family signature 321 340 IPR018082 -
Blo02g00696 422 PRINTS Pollen allergen Amb family signature 95 112 IPR018082 -
Blo02g00696 422 PRINTS Pollen allergen Amb family signature 219 240 IPR018082 -
Blo02g00696 422 PRINTS Pollen allergen Amb family signature 364 388 IPR018082 -
Blo02g00696 422 Pfam Pectate lyase 153 336 IPR002022 -
Blo02g00696 422 PANTHER PECTATE LYASE 18-RELATED 34 418 IPR045032 GO:0030570
Blo02g00696 422 PANTHER OS04G0137100 PROTEIN 34 418 - -
Blo02g00696 422 Gene3D - 72 415 IPR012334 -
Blo02g00696 422 SUPERFAMILY Pectin lyase-like 54 416 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00696 Blo-Chr2:21029835 Blo07g01064 Blo-Chr7:30485130 0 dispersed
Blo02g00696 Blo-Chr2:21029835 Blo12g00125 Blo-Chr12:8720829 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00696 K01728 - csin:114301210 706.057