Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00770 ATGACAGAGCAAGCCCATCTTTATGGGCCTTTAGATCTAAGAAAGGTCCACATTGTTTCAGTCTCTAACCATCCTGCTTCTTCCCCTCCGCGCTGCCTGCTCATTGGACTAGCGGCGCCAACTCTCCGTCTCTGGGAATACTGCGACCAGCTCGTGCTCCGACCTAAACCCTATCTCTCTCCCAGCATGAACTGCTCGATTTCCGGTGAGGTTCCGGAAGAACCGGTTGTCTCAACGAAATCCGGATTACTCTTCGAGAAGCGTTTAATCGAGAGGCACATTTTGGACTACGGTAAATGCCCAATTACTGGGGAATCACTAGCCGTGGATGATGTTGTTCCAATTAAAACTGGGAAGATGGTAAAGCCCAGACCCGTTCAAGCGGCTAGTATCCCTGGCATGTTAGGAATGTTCCAGAATGAATGGGATGGCTTAATGCTTTCTAATTTTGCACTTGAGCAACAATTGCATACCGCCAGACAAGAGCTAAGCCATGCTTTATACCAGCATGATGCTGCCTGCCGTGTGATTGCAAGGCTTAAAAAAGAAAGGGATGATGCTCGGTCATTACTTGCACAAGCTGAAAGGCAAATGCCTTCTGTAACATCCACACCAATTGCGACTGCTTCTGTTCATAGCAATGGGAAACGAGGTGCTGAAGATGAAGAATCTGGCCCTGATGGAAAGAGAATACACCCTGGAATAACTACAAGTATTATCTCTGAGCTTACAGACTGTAATGCTGCACTCTCACAGCAGAGGAAGAAGCGACAGATACCAGCAACTTTGGCTCCTGTCGAACTTTTGGAGAGCTATACCCAGATATCTAGTCATCCACTCCATAAAACAAGCAAACCTGGCATTTTATCTCTTGACATTCATTACGGCAAGGACATAGTTTCCACTGGAGGGCTTGACACCAATGCAGTAATTTTTGATCGACCATCTGGACAGATTTTATCTACACTTAGCGGTCATTCTAAAAAGGTGACTAGTGTAAAGTTTGTGGCGCGAGATGCATTATTCTTAAGTGGGTCGGCTGATAAGACTGTTCGTGTATGGCAAGGCCATGATGATGGGAATTATAGTTGTAGGCATGTCTTGAAGGATCACGCTGCTGAGGTGCAAGCAGTTACAGTTCATGCTACAAACAACTACTTTGTGACTGCCTCTCTTGATAACACATGGTGTTTTTATGAACTTTCTTCAGGATTATGTTTAGCACAGGTCGCAGACACTTCAGGAACAGAGGGCTACACATCGGCAGCCTTTCATCCTGATGGTCTTATCCTTGGAACAGGCACATCTGAGGCTCTTGTTAAGATTTGGGATGTAAAAAGTCAGACAAATGTTGCCAGATTTGATGGACACGTTGGGGCTGTTACTGCAATATCTTTCTCAGAGAACGGATATTTCCTTGCGACTGCTGCGCATGATGGTGTAAAGCTGTGGGATCTACGCAAATTAAAGAACTTCCGCACATTTTCTCCATATGATTCAGATACACCAACAAACTCTGTTGAATTCGACCAAAGTGGAAGTTACCTAGCAATTGCAGGATCAGATATAAGGGTTTACCAAGTTGCGAACGTGAAATCTGAATGGAATTGCATTAAGACTATCCCAGATTTGTCTGGAACAGGTAAAGCAACGTGCATCAAATTTGGTCTAGATGGAAAATACTTAGCTGTAGGATCAATGGACCGAAACCTCCGGATATTTGGTTTGCCGGGTGAAGATGGTCCAATGGAGTCATAA 1758 44.88 MTEQAHLYGPLDLRKVHIVSVSNHPASSPPRCLLIGLAAPTLRLWEYCDQLVLRPKPYLSPSMNCSISGEVPEEPVVSTKSGLLFEKRLIERHILDYGKCPITGESLAVDDVVPIKTGKMVKPRPVQAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDDARSLLAQAERQMPSVTSTPIATASVHSNGKRGAEDEESGPDGKRIHPGITTSIISELTDCNAALSQQRKKRQIPATLAPVELLESYTQISSHPLHKTSKPGILSLDIHYGKDIVSTGGLDTNAVIFDRPSGQILSTLSGHSKKVTSVKFVARDALFLSGSADKTVRVWQGHDDGNYSCRHVLKDHAAEVQAVTVHATNNYFVTASLDNTWCFYELSSGLCLAQVADTSGTEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQTNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRTFSPYDSDTPTNSVEFDQSGSYLAIAGSDIRVYQVANVKSEWNCIKTIPDLSGTGKATCIKFGLDGKYLAVGSMDRNLRIFGLPGEDGPMES 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 25991592 25999956 + BLOR10500 Blo02g00770 57000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00770 585 MobiDBLite consensus disorder prediction 194 233 - -
Blo02g00770 585 Pfam Prp19/Pso4-like 128 193 IPR013915 -
Blo02g00770 585 CDD WD40 287 574 - -
Blo02g00770 585 SUPERFAMILY RING/U-box 63 115 - -
Blo02g00770 585 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 122 IPR013083 -
Blo02g00770 585 ProSiteProfiles Trp-Asp (WD) repeats profile. 454 494 IPR001680 GO:0005515
Blo02g00770 585 MobiDBLite consensus disorder prediction 215 229 - -
Blo02g00770 585 SUPERFAMILY WD40 repeat-like 285 574 IPR036322 GO:0005515
Blo02g00770 585 CDD RING-Ubox_PRP19 65 116 - -
Blo02g00770 585 Pfam WD domain, G-beta repeat 450 485 IPR001680 GO:0005515
Blo02g00770 585 Pfam WD domain, G-beta repeat 317 354 IPR001680 GO:0005515
Blo02g00770 585 Pfam WD domain, G-beta repeat 537 574 IPR001680 GO:0005515
Blo02g00770 585 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 323 355 - -
Blo02g00770 585 SMART WD40_4 447 485 IPR001680 GO:0005515
Blo02g00770 585 SMART WD40_4 316 355 IPR001680 GO:0005515
Blo02g00770 585 SMART WD40_4 534 575 IPR001680 GO:0005515
Blo02g00770 585 SMART WD40_4 361 400 IPR001680 GO:0005515
Blo02g00770 585 SMART WD40_4 271 313 IPR001680 GO:0005515
Blo02g00770 585 SMART WD40_4 403 444 IPR001680 GO:0005515
Blo02g00770 585 SMART WD40_4 488 527 IPR001680 GO:0005515
Blo02g00770 585 ProSiteProfiles Trp-Asp (WD) repeats profile. 323 355 IPR001680 GO:0005515
Blo02g00770 585 PANTHER PRE-MRNA-PROCESSING FACTOR 19 35 585 IPR038959 GO:0000398|GO:0000974|GO:0006281|GO:0061630
Blo02g00770 585 ProSiteProfiles Trp-Asp (WD) repeats profile. 412 453 IPR001680 GO:0005515
Blo02g00770 585 MobiDBLite consensus disorder prediction 195 211 - -
Blo02g00770 585 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 454 487 - -
Blo02g00770 585 SMART Ubox_2 62 128 IPR003613 GO:0004842|GO:0016567
Blo02g00770 585 Gene3D - 263 576 IPR015943 GO:0005515
Blo02g00770 585 ProSiteProfiles U-box domain profile. 58 132 IPR003613 GO:0004842|GO:0016567
Blo02g00770 585 Coils Coil 177 197 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00770 Blo-Chr2:25991592 Blo12g00571 Blo-Chr12:23963478 1.94E-30 dispersed
Blo13g00939 Blo-Chr13:31827783 Blo02g00770 Blo-Chr2:25991592 3.27E-10 dispersed
Blo02g00770 Blo-Chr2:25991592 Blo07g00287 Blo-Chr7:3350530 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00770 K10599 - vvi:100249408 912.524