Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00805 ATGAAAAATCTTCTTCTTCAGTTTCTTCTTCTTTTCATGAATTTGCATTTTGAGCTGGGAACTACCAGCATCAGTTCTCTGCATGATGAAGCTAGTCTCATTGAAGCCGTCAAACAGGTGGATGAGGTCATCTGTGCTGTTTCTTCTAAACAGGTCTCCAATCAAAAGCTTCTGATTACTGTTATTAAAGAATCTGGATGCATCAAAGTAAGTACCTCTGAAGTCCTAGAATTTCTTTTCTCTATGATTATTTCTTTCTGGTCCTGCATTGATAACTGGGATTTGTGTGGTGTATTTGTGAAGAAGAGTGATGTAGCTGCCTTCACAATCAGAGCAGTGGATGATCCACGCACATTGAACAAGGTACTCCATCTAAGGCCTCCTGGAAATGTTTACTCCATTAATGAGCTGGTTCAACTTTGGGAGAATAAGATTGGAAAAAAGCTTGAGAAGATTTATGTTTCTGATGAGAAGCTGCTCAAGAAAATTGAAGAAACACCTTATCCTGACAATATGGAGTTGATCTTCATATATTCTGCTTTTTCCACCCTTGGTCACGCTCAGTTAGTCCATCAAAATAAACTTATTTCTGCTATCAAAGAAGCTGGAAATGTCAAGAGGTTCTTTCCTTCGGAGTTTGGAAACGATGGGGATCGCGTCCATGCAGTGGAGCCAGCGAAATCGGCATTTGCTGCTAAAGCTAAAGTTCGACTAGCTGTAGAGGCAGAGGGAATTCCGCACACCATTGTTTCCTCCAAATTCTTTGCTGGTTACTTTCTTCCTAATTTGTCACAGCCCGGAGCCACTTCTCCCCCAAGAGACAAAGTTGTAATATTAGGAGATGGAAATCCGAAAGCAATTTTCAACAAGGAAGAAGACATTGCAACCTATACTATTAGATCAGTGGACGACCCAAGAACCCTGAACAAAATCCTTTGCATCAGATGCCCTGGCAACATATACTCCATGAATGATCTCGTGTCACTGTGGGAGAAAAGAATCGGCAAAACGGTTGATAAGGTCTACATTCCAGAGGACCAAGTGTTGAAAAACATTCAAGAGGCCGCTCTTCCTCTTAATGTGGTGTTGGCAATTGGACATTCGGTATTTGTGAAGGGAGATCATACTAACTTTGAAATTGAGCCATCATTCGGAGTTGAGGCTTCGGAGCTTTATCCAGATGTTAAATACACAACCGTGGATGAGTTCCTTGATCAATTTGTTTGA 1227 41.16 MKNLLLQFLLLFMNLHFELGTTSISSLHDEASLIEAVKQVDEVICAVSSKQVSNQKLLITVIKESGCIKVSTSEVLEFLFSMIISFWSCIDNWDLCGVFVKKSDVAAFTIRAVDDPRTLNKVLHLRPPGNVYSINELVQLWENKIGKKLEKIYVSDEKLLKKIEETPYPDNMELIFIYSAFSTLGHAQLVHQNKLISAIKEAGNVKRFFPSEFGNDGDRVHAVEPAKSAFAAKAKVRLAVEAEGIPHTIVSSKFFAGYFLPNLSQPGATSPPRDKVVILGDGNPKAIFNKEEDIATYTIRSVDDPRTLNKILCIRCPGNIYSMNDLVSLWEKRIGKTVDKVYIPEDQVLKNIQEAALPLNVVLAIGHSVFVKGDHTNFEIEPSFGVEASELYPDVKYTTVDEFLDQFV 408
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 27837245 27844967 + BLOR10535 Blo02g00805 57035

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00805 408 PANTHER PINORESINOL REDUCTASE-RELATED 181 408 - -
Blo02g00805 408 PANTHER PINORESINOL REDUCTASE-RELATED 97 181 - -
Blo02g00805 408 Pfam NmrA-like family 97 148 IPR008030 -
Blo02g00805 408 Pfam NmrA-like family 179 338 IPR008030 -
Blo02g00805 408 Pfam NmrA-like family 26 69 IPR008030 -
Blo02g00805 408 PANTHER PHENYLCOUMARAN BENZYLIC ETHER REDUCTASE 1 181 408 - -
Blo02g00805 408 PANTHER PINORESINOL REDUCTASE-RELATED 24 69 - -
Blo02g00805 408 Gene3D - 21 138 - -
Blo02g00805 408 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 26 184 IPR036291 -
Blo02g00805 408 Gene3D - 288 408 - -
Blo02g00805 408 PANTHER PHENYLCOUMARAN BENZYLIC ETHER REDUCTASE 1 24 69 - -
Blo02g00805 408 PANTHER PHENYLCOUMARAN BENZYLIC ETHER REDUCTASE 1 97 181 - -
Blo02g00805 408 Gene3D - 177 278 - -
Blo02g00805 408 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 177 371 IPR036291 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00805 K23050 PCBER1; phenylcoumaran benzylic ether reductase [EC:1.3.1.-] - ming:122072712 385.956
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00805 Blo-Chr2:27837245 Blo02g01225 Blo-Chr2:44366239 6.88E-27 dispersed
Blo02g00805 Blo-Chr2:27837245 Blo17g00792 Blo-Chr17:25281445 2.40E-24 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g372 Blo02g00805 . . Bda08g00938 . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone12ag1156 Cone8ag1205 . . . . . . . . . . . . . . Sed01g0300 . . . . . . Cpe16g00245 . Bhi10g01999 Tan05g1297 Cmetu11g2121 . Hepe08g1011 . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000111 5 10 6 7 3 10 5 11 9 7 10 9 5 7 11 5 9 5 6 10 8 9 7 8 12 9 8 7 9 7 234
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo02g00805 Blo_Chr02 FPKM 8.120635 0.0 8.511824 9.44217 8.511199 10.698818 10.381392 1.054385 0.344021 0.517792