Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00831 ATGGGTGTAGTTGCAAATCATAGGGGCTCCAGAGGTGGGACGAATCAGGATGGTTTGCCTGTACAAAATGAGGTTCTTCCGACGGCGACGCAGAAGAAATGGACTAATCTGATGCCTTTAGTTGTAGCCCTTGTTGTTTTTGCAGAAATTGCCTTTCTAGGTCGTCTCGACTTGGCTAAAAACACTGCCTTGGTCGATTCCTGGGCCGACCTGTTCTATCAGTCACCTCCGTCGCGGGAGGCGTTGCAGGGTGTTGATGACTTTAATTCTGGATCTATTGTTCGCGATGAGATTGTGGAATTTGAGAGCTGCGAGGATTGGTTAGAGAAAGAAGACGCTGCTGTGTATTCTAGGGATTTTGGCAAAGAACCCATCTTAGTTTCTGGTGGTGAGAAGGAGTGGAGATCTTGTGCAGTGGGATGTGAATTTGGATCTAATCCTAGTAAGAAGCCTGATGCTGCATTTGGTTTACATGGTGGACCACAAAGTATACTCCGTTCCATGGAATCAGCTCAGTACTATGCAGAGAACAATATTGCAATCGCACGAAGGAAAGGTTATAGTATTATAATGACCACCAGTCTCTCGTCGGATGTTCCTGTCGGATATTTTTCGTGGGCGGAGTATGATATCATGGCACCAGTACAACCAAAGACCAAGACATCCCTTGCAGCTGCTTTTATTTCAAATTGTGGTGCTCGTAACTTTCGGTTGGAAGCTCTGGAAGCTCTTGAAAAATCGAAAATCATGATTGATTCGTATGGTGGTTGCCACAGGAACCGTGATGGAAGAGTGAATAAGGTGGAGACTCTGAAGCGATACAAATTTAGCCTGGCATTTGAGAACTCCAATGAAGAGGATTATGTCACTGAAAAATTTTTCCAATCTCTTGTAGCAGGAACGATTCCGGTGGTGGTTGGGGCTCCAAATATAGAAGATTTTGCTCCTTCTCCTGGTTCGATTTTACATATTAAGGAGCCTTCAGATGTTGAGCCAGTGGCAAAAGCCATGAAATATCTTTCAGAAAATCCAGATGCATATAACCAGTCATTGAGATGGAAATATGAAGGTCCATCTGATTCATTCAAGGCCCTAGTGGATATGGCAGCCGTTCACTCATCATGCAGGCTTTGCATTCACTTGGCGACATCCATTCGGGATAAAGAAGAAAGGAGCCCTGGATATAAGAAACGCCCTTGCAAGTGTACGAGAGCCTCAGAAACAGTGTACCATTTGTACGTCAGAGAAAGAGGGAGGTTTGATTTTGAGTCTATTTTCTTAAGGTCTGGAAATTTGACGTTGGTGGCTCTTGAGTCAGTGGTGCTCGAAAAGTTCAGTTCTAAAAAGCATATTCCGATATGGAAGGAGGAAAGGCCGGAAAGCATAAGAGGTGGGGATGAACTGAAAGTGTATAGAATATATCCTCTGGGGTTGACTCAAAGACAGGCATTGTATAGCTTCAGATTTAAAGGGGATTCTGATCTGAGAAATCAGGTGGAGGGCCATCCTTGTGCAAAGCTTGAAGTCATCTTTGTTTAG 1539 44.25 MGVVANHRGSRGGTNQDGLPVQNEVLPTATQKKWTNLMPLVVALVVFAEIAFLGRLDLAKNTALVDSWADLFYQSPPSREALQGVDDFNSGSIVRDEIVEFESCEDWLEKEDAAVYSRDFGKEPILVSGGEKEWRSCAVGCEFGSNPSKKPDAAFGLHGGPQSILRSMESAQYYAENNIAIARRKGYSIIMTTSLSSDVPVGYFSWAEYDIMAPVQPKTKTSLAAAFISNCGARNFRLEALEALEKSKIMIDSYGGCHRNRDGRVNKVETLKRYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGAPNIEDFAPSPGSILHIKEPSDVEPVAKAMKYLSENPDAYNQSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHLATSIRDKEERSPGYKKRPCKCTRASETVYHLYVRERGRFDFESIFLRSGNLTLVALESVVLEKFSSKKHIPIWKEERPESIRGGDELKVYRIYPLGLTQRQALYSFRFKGDSDLRNQVEGHPCAKLEVIFV 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 29957294 29966879 - BLOR10561 Blo02g00831 57061

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00831 512 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 35 489 IPR001503 GO:0006486|GO:0008417|GO:0016020
Blo02g00831 512 MobiDBLite consensus disorder prediction 1 22 - -
Blo02g00831 512 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 110 387 - -
Blo02g00831 512 PANTHER FUCOSYLTRANSFERASE-LIKE PROTEIN-RELATED 35 489 - -
Blo02g00831 512 Gene3D - 167 361 IPR038577 -
Blo02g00831 512 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 218 386 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00831 K00753 E2.4.1.214; glycoprotein 3-alpha-L-fucosyltransferase [EC:2.4.1.214] - zju:107427081 791.186
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo02g00831 Blo15g00748 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00831 Blo-Chr2:29957294 Blo17g00157 Blo-Chr17:1463821 1.80E-15 dispersed
Blo15g00748 Blo-Chr15:25386504 Blo02g00831 Blo-Chr2:29957294 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g408 Blo02g00831 Blo15g00748 Bda06g01072 Bda08g00885 . . Bma05g00514 . Cmo19g00620 . . . . . . . Cpe15g00486 Bhi05g01063 . . . . . . Cla02g00602 Cam02g0631 Cec02g0631 Cco02g0650 Clacu02g0635 Cmu02g0631 Cre02g0955 . . Cone3ag1179 Cone10ag0987 . Csa07g00757 . Cme01g00052 . . . . . . . . . . . . Cma19g00602 . Car19g00455 Cpe14g00294 Cpe01g00439 . . . . . . . . . . . . . . . . Chy01g00056 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Blo11g00785 . 84 566 Xyloglucan Fucosyltransferase1 AT1G14080 55.9 8.5e-159 557.4
Blo11g00785 . 84 567 Xyloglucan Fucosyltransferase1 AT1G14100 55.8 7.4e-160 560.8
Blo11g00785 . 81 570 Xyloglucan Fucosyltransferase1 AT1G14110 52.5 4.9e-142 501.5
Blo02g00831 BCT 1 512 Xyloglucan Fucosyltransferase1 AT1G49710 64.3 9.5e-192 666.8
Blo15g00748 BCT 1 538 Xyloglucan Fucosyltransferase1 AT1G49710 58.8 4.9e-180 627.9
Blo17g00157 . 1 403 Xyloglucan Fucosyltransferase1 AT1G71990 69.4 7.8e-165 577.0
Blo11g00785 . 3 566 Xyloglucan Fucosyltransferase1 AT2G03210 55.7 1.4e-180 629.8
Blo11g00785 . 2 564 Xyloglucan Fucosyltransferase1 AT2G03220 61.1 1.7e-202 702.6
Blo03g00764 . 44 525 Xyloglucan Fucosyltransferase1 AT2G03220 52.9 4.9e-149 525.0
Blo11g00785 . 99 566 Xyloglucan Fucosyltransferase1 AT2G15350 52.4 7.2e-147 517.7
Blo11g00785 . 94 566 Xyloglucan Fucosyltransferase1 AT2G15370 52.4 5.9e-144 508.1
Blo11g00785 . 99 566 Xyloglucan Fucosyltransferase1 AT2G15390 54.1 2.9e-151 532.3
Blo02g00831 BCT 1 512 Xyloglucan Fucosyltransferase1 AT3G19280 63.7 9.6e-189 656.8
Blo15g00748 BCT 1 538 Xyloglucan Fucosyltransferase1 AT3G19280 59.2 7.6e-178 620.5
Blo11g00785 . 3 566 Xyloglucan Fucosyltransferase1 AT2G03210 55.7 1.4e-180 629.8
Blo11g00785 . 2 564 Xyloglucan Fucosyltransferase1 AT2G03220 61.1 1.7e-202 702.6
Blo03g00764 . 44 525 Xyloglucan Fucosyltransferase1 AT2G03220 52.9 4.9e-149 525.0
Blo11g00785 . 3 566 Xyloglucan Fucosyltransferase1 AT2G03210 55.7 1.4e-180 629.8
Blo11g00785 . 99 566 Xyloglucan Fucosyltransferase1 AT2G15390 54.1 2.9e-151 532.3
Blo11g00785 . 94 566 Xyloglucan Fucosyltransferase1 AT2G15370 52.4 5.9e-144 508.1
Blo11g00785 . 84 566 Xyloglucan Fucosyltransferase1 AT1G14080 55.9 8.5e-159 557.4
Blo11g00785 . 84 567 Xyloglucan Fucosyltransferase1 AT1G14100 55.8 7.4e-160 560.8
Blo11g00785 . 81 570 Xyloglucan Fucosyltransferase1 AT1G14110 52.5 4.9e-142 501.5
Blo11g00785 . 99 566 Xyloglucan Fucosyltransferase1 AT2G15350 52.4 7.2e-147 517.7
Blo02g00831 BCT 1 512 Xyloglucan Fucosyltransferase1 AT3G19280 63.7 9.6e-189 656.8
Blo15g00748 BCT 1 538 Xyloglucan Fucosyltransferase1 AT3G19280 59.2 7.6e-178 620.5
Blo02g00831 BCT 1 512 Xyloglucan Fucosyltransferase1 AT1G49710 64.3 9.5e-192 666.8
Blo15g00748 BCT 1 538 Xyloglucan Fucosyltransferase1 AT1G49710 58.8 4.9e-180 627.9
Blo17g00157 . 1 403 Xyloglucan Fucosyltransferase1 AT1G71990 69.4 7.8e-165 577.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001699 7 4 2 3 2 2 2 2 2 2 2 2 2 2 2 2 2 3 2 2 2 2 2 2 2 2 2 2 4 1 70
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo02g00831 Blo_Chr02 FPKM 8.466847 7.521775 3.207186 3.666959 16.669615 15.735982 20.594912 2.363137 2.208172 2.346149