Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00836 ATGTTTGGTGGAAGTGTGTATTGGGGAAGGAAGAACGCTGACAGTCGTGGAGGAATTGTCGTTCTTTTTGCTTGGGTTTCCCTTCAGGATCGGCACTTGAGCAACTTTGTGGATTTGTATTCGTCGCTCGGCTGGAATTCCCTCGTTTGCCGAGCTGATTTTCTCAATGCATACTATCCTGGCAGAGCTACGTCGTTAGCTTTTATCCTTCTTAATGAGCTTGTTGAGGAGTTAAGGCAGAGGCCCTCTCCGCTAGTTTTTGTAACATTTTCTGCTGCTTCAAAGGCTTGTATGTACAAGGTTTTTCAGGTAGATTTTCTTTTTCAATTATTATTGAGATTCAGTTTTGCATTGATACTTGAGGGAACATGTGAAGATCAGCTCTACATGAATGAATGTCGCATTGTCAAAATTTGCATTTCCGGACACATCTACGATTCTAGTCCAGTTGAATTTACCAGTGACTTGGGTGCACGCTTTTCTCTCCACCCAACAATTTTAAAAATGGTTGGATCGTCCAAACTTGTTTCCTGGATTGCAAAAGGTGTTGCATCTGGTCTCGATACGTTATATGTTACCAGACTTGATTTGCAACATTCTGAATATTGGAAAACTCTTAACTCCTCTGTGAGTTTTGGTGCTCCATTTCTCTTTTTATGCTCTGGGAAGGATAGCCTTGCACCATATCACATTATTCGAAGTTTCAATCAACGAATTCAAGAACTTGGTGCAGATGCTGAGGTTGTGGAATTCAGTTCATCCCCACATGTCGGTTCGTCTCAGACCTTTGCTATTTTTCTTTTAAATTTAAGTTATGAGATTGGGATTTCATACATTCAATTTTTAATCAATGGGCAATTAGAGTACTTGTTTTTAAGGGGTCATTATAAGACTTGTCCTATTCAGTATAAAGCTGCCGTAAGTTATTTGCTTGAAAAGGCTACTTCCGTCTATTCGAAAAGAATCTCTCAACTCAAGGGAGAAATCCACGATGAGATGTCTGAGCTGATATGCGACCTTCAAAATGCTGCAGTTAACTCGAATCAGAGCCTCGCAAGGGTTGCACTGGGGCCTGGTGACCACTTTTTCTTGCCGAGCTCCGAAGAGTCAAAAAATGATGGAAACTCTCCATCCTTCAAACACGAACAGAAGGAAAGATCAAACTACGTTTCCTGTTTGAGTCCTCCGGGCATCAGCGCACACAGCGTACTCGGCAAAATCATCTTTGATGTTTGTGTTCCAAAAAATGTCGAAGGTTGGGACATAAAGTTTTGCGGCTCTTTAAATGGGCAGCCACTTGCCTCTGCTCACAGGCGGTCACCTAAACACGAGATTAAAGATGTTCGACGATCGAGATTATAA 1362 41.78 MFGGSVYWGRKNADSRGGIVVLFAWVSLQDRHLSNFVDLYSSLGWNSLVCRADFLNAYYPGRATSLAFILLNELVEELRQRPSPLVFVTFSAASKACMYKVFQVDFLFQLLLRFSFALILEGTCEDQLYMNECRIVKICISGHIYDSSPVEFTSDLGARFSLHPTILKMVGSSKLVSWIAKGVASGLDTLYVTRLDLQHSEYWKTLNSSVSFGAPFLFLCSGKDSLAPYHIIRSFNQRIQELGADAEVVEFSSSPHVGSSQTFAIFLLNLSYEIGISYIQFLINGQLEYLFLRGHYKTCPIQYKAAVSYLLEKATSVYSKRISQLKGEIHDEMSELICDLQNAAVNSNQSLARVALGPGDHFFLPSSEESKNDGNSPSFKHEQKERSNYVSCLSPPGISAHSVLGKIIFDVCVPKNVEGWDIKFCGSLNGQPLASAHRRSPKHEIKDVRRSRL 453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 30369426 30371960 - BLOR10566 Blo02g00836 57066

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00836 453 PANTHER UNCHARACTERIZED 3 261 IPR008547 -
Blo02g00836 453 MobiDBLite consensus disorder prediction 433 453 - -
Blo02g00836 453 PANTHER DUF829 DOMAIN PROTEIN 3 261 - -
Blo02g00836 453 Pfam Eukaryotic protein of unknown function (DUF829) 139 420 IPR008547 -
Blo02g00836 453 PANTHER DUF829 DOMAIN PROTEIN 294 385 - -
Blo02g00836 453 SUPERFAMILY alpha/beta-Hydrolases 36 260 IPR029058 -
Blo02g00836 453 MobiDBLite consensus disorder prediction 437 453 - -
Blo02g00836 453 PANTHER UNCHARACTERIZED 294 385 IPR008547 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00836 - - - mdm:103436514 512.301
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo02g00836 Blo15g00736 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00836 Blo-Chr2:30369426 Blo18g00729 Blo-Chr18:19352385 1.90E-128 dispersed
Blo15g00736 Blo-Chr15:24725560 Blo02g00836 Blo-Chr2:30369426 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g434 Blo02g00836 Blo15g00736 Bda06g01054 Bda08g00853 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone3ag1106 . . . . . . . . . . . . . . . . . . . . Cpe14g00300 Cpe01g00451 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004102 6 1 2 0 0 0 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 3 6 1 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo02g00836 Blo_Chr02 FPKM 12.391348 15.45017 7.084608 8.548081 7.666512 7.216331 8.275732 9.068035 8.950503 10.549794