Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00841 ATGTCAAGATATGATAGTTCTTGGAGTGGAGGAGAAAGCATTCCCCGTGGAGGAATTGAGTTATCCAGCGAAGTAGACTTACAAGGAACTATAGCAATGGATGCCCAAAACCAGAGTCCGAGCTCAAATTCCTCTCCAACCAAACAGATCTTCATCCTCGCTGGCCAAAGCAACATGGCCGGACGCGGCGGCGCGTCGCAGAAAACTCACCACTGGGACGGCTTCGTTCCGGCCGCCTGCCAACCCCACCCTTCCATTCTCCGCCTCAACGCCAAACTCCAATGGGAGGAAGCTAACGAACCGCTCCACGCCGACATCGACACGAAAAAGGTTTGCGGGGTTGGTCCAGGAATGTCATTCGCCAACGCGGTTAGGGAGAGGGTGGGAACGGCGGGGCTGGTTCCTTGCGCCGTCGGGGGGACCGCCATAAAGGAGTGGGCGCGTGGACAGCACTTGTACGAAAAGATGGTGAGGAGAGCGAAGGAGAGCGTGAAAAGTGGAGGAAAAATCAGAGCACTGCTGTGGTACCAAGGAGAAAGCGACACGTCGACACAGCATGATGCTGATGCGTACCAGAGGAACATGGAGCAGCTCATAAAAAATGTTAGAAGTGACCTCAGTTTGCCTTGTCTCCCCATAATTCAGGTTGCAATAGCTTCAGGGGATGCAAAATACACAGAGAGTGTGAGGGAAGCGCAAAAGCGGATAAAAATGGAAAATGTGGTGTGCGTCGATGCAAAGGGATTGGCACTTCAGGAAGACCACCTTCACTTAACTTCGGATGCTCAAGCTCAACTCGGTCAGTTTCTGGCCAATGCATTTCTCGCCAATTTCGCTTCATCTGCTGCGTCGGTGCGTTTCTTCTACTTGGCCATTTTATTTTCTTTCTTTGTTGTCTTGGTGGGATTTCATTTTGTTTTCTGA 924 51.41 MSRYDSSWSGGESIPRGGIELSSEVDLQGTIAMDAQNQSPSSNSSPTKQIFILAGQSNMAGRGGASQKTHHWDGFVPAACQPHPSILRLNAKLQWEEANEPLHADIDTKKVCGVGPGMSFANAVRERVGTAGLVPCAVGGTAIKEWARGQHLYEKMVRRAKESVKSGGKIRALLWYQGESDTSTQHDADAYQRNMEQLIKNVRSDLSLPCLPIIQVAIASGDAKYTESVREAQKRIKMENVVCVDAKGLALQEDHLHLTSDAQAQLGQFLANAFLANFASSAASVRFFYLAILFSFFVVLVGFHFVF 307
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 31050823 31052666 - BLOR10571 Blo02g00841 57071

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00841 307 Gene3D SGNH hydrolase 47 279 IPR036514 -
Blo02g00841 307 Pfam Carbohydrate esterase, sialic acid-specific acetylesterase 48 275 IPR005181 -
Blo02g00841 307 PANTHER ESTERASE, PUTATIVE (DUF303)-RELATED 44 278 - -
Blo02g00841 307 PANTHER BNACNNG62850D PROTEIN 44 278 - -
Blo02g00841 307 SUPERFAMILY SGNH hydrolase 49 277 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00841 - - - vvi:100260676 343.584
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00841 Blo-Chr2:31050823 Blo12g00972 Blo-Chr12:27795299 7.40E-81 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g619 Blo02g00841 . . Bda08g00768 . . Bma05g00526 . Cmo19g00597 . . . . . . . Cpe15g00469 . . . . . . . Cla02g00633 Cam02g0666 . . Clacu02g0674 Cmu02g0668 . Cone12ag1073 . . . Lsi03g00529 . . . . . . . . . . . . . . . Cma19g00581 . Car19g00443 . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009277 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 3 34
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo02g00841 Blo_Chr02 FPKM 0.60908 0.0 1.361505 2.193905 1.286137 1.087646 1.488308 3.757994 3.768604 4.288347