Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00869 ATGGACGCAGGGAGTGTCAGAACTTATGTTATTGGTTCGGGCATTTGGCGAACCAAAGGCCTCATTGGCGGCAAATGGACTGATGCATATGATGGGAAGACCATTAAGGTTTACAACCCGGCTACCGGTGAGGAGGTGGCAGATGTTGCATGTATGGGTAAAAGGGAGACAAATGATGCTATCTCTTGTGCCTATGAAGCTTTTAAATCTTGGGGCAAGCTTACTGCCATTGAAAGGAGCAAACGCCTTAAAAGATGGTATGATTTATTGATTGCACACAAGGAAGAGCTTGGACAAATTATAACCTTAGAGCAAGGAAAACCATTTAAGGACGCTGTTGGTGAGGTTATTTTCGGGGCCAGCTACATTGATTTTTTTGCAGAAGAAGCGAAACGAGTCTATGGTGATATAATTCCATCAACTGTAGCTGATTGTCGGCTTTTGATCTTAAAGCAGCCCGTTGGAGTCGTTGGTGCAATTACACCTTGGAACTTTCCTTTGGCTATGATTGCTCGGAAGGTTGGTCCTGCTCTTGCATGTGGCTGTACTGTTGTTATAAAACCCTCTGAACTTACACCTCTCACAGCTTTAGCAGCAGCTGAGCTCTCCCTTCAGGCTGGAATCCCCCCTGGTGTTGTGAATGTGGTCATGGGAATTGCTCCAGAAATTGGGGATGCTTTACTTGTCAGCAAACAGGTAAGAAAGATAACATTCACTGGCTCAACAGCAGTGGGGAAGATGTTAATGGCTCGAGCTGCGGAGACTGTTAAAAAGGTGTCTCTGGAACTTGGTGGCAATGCACCATGCATTGTGTTTGATGATGCAGATATTGATATAGCAGTAAAAGGAACCCTTGCTGCAAAGTTCCGAAACACTGGGCAAACTTGTGTATGTGCCAACAGGATTTTTGTTCAAGAAGGTATATACGAGAAATTCGCTGCTGCTTTTTCTAGAGAAGTCCGCAATATGAAAGTTGGACATGGCTTTAGTGAAGGTGTGGTTCAGGTAGGTCCTCTCATCAATGAAGCAGCAGTTATCAAGGTTGAAACATTTATTCAAGATGCTGTCGCTAAGGGAGCGAAAGTTGTTCTGGGAGGTCAAAGGCATAGGCTGGGAATGACCTTTTATGAGCCTACAGTTCTTAAGGATGTCAACCATGATATGCTGATAGCCAGAGAGGAAGTATTTGGTCCTGTGGCACCCTTATTGCGGTTTAGAACTGAGGAGGAAGTAATTTCCCTTGCCAATGATACCAATGCAGGTTGGTTAGCTGCTTATGTATTCACTCAGAATGTTCAACGATCTTGGCGTATGACTGAATCTCTTGAATACGGCATTGTTGGTGTCAATGAAGGACTCATTTCTACCGAGGTAGCTCCATTTGGAGGCTTTAAACAGTCAGGGCTTGGTCGGGAAGGTTCAAAATATGGGATGGACGACTATCTGGAGGTAAGTGTGTTTCATAGATGCTCATCTAATGGATCTTAG 1488 44.42 MDAGSVRTYVIGSGIWRTKGLIGGKWTDAYDGKTIKVYNPATGEEVADVACMGKRETNDAISCAYEAFKSWGKLTAIERSKRLKRWYDLLIAHKEELGQIITLEQGKPFKDAVGEVIFGASYIDFFAEEAKRVYGDIIPSTVADCRLLILKQPVGVVGAITPWNFPLAMIARKVGPALACGCTVVIKPSELTPLTALAAAELSLQAGIPPGVVNVVMGIAPEIGDALLVSKQVRKITFTGSTAVGKMLMARAAETVKKVSLELGGNAPCIVFDDADIDIAVKGTLAAKFRNTGQTCVCANRIFVQEGIYEKFAAAFSREVRNMKVGHGFSEGVVQVGPLINEAAVIKVETFIQDAVAKGAKVVLGGQRHRLGMTFYEPTVLKDVNHDMLIAREEVFGPVAPLLRFRTEEEVISLANDTNAGWLAAYVFTQNVQRSWRMTESLEYGIVGVNEGLISTEVAPFGGFKQSGLGREGSKYGMDDYLEVSVFHRCSSNGS 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33613475 33623420 - BLOR10599 Blo02g00869 57099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00869 495 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 265 456 IPR016163 GO:0016620
Blo02g00869 495 Pfam Aldehyde dehydrogenase family 26 485 IPR015590 GO:0016491
Blo02g00869 495 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 15 486 - -
Blo02g00869 495 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 261 268 IPR029510 GO:0016491
Blo02g00869 495 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 32 481 IPR016162 GO:0016491
Blo02g00869 495 CDD ALDH_F5_SSADH_GabD 37 484 - -
Blo02g00869 495 SUPERFAMILY ALDH-like 11 485 IPR016161 GO:0016491
Blo02g00869 495 TIGRFAM SSADH: succinate-semialdehyde dehydrogenase 37 484 IPR010102 GO:0009013|GO:0009450
Blo02g00869 495 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 15 486 - -
Blo02g00869 495 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 289 300 IPR016160 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00869 Blo-Chr2:33613475 Blo15g00791 Blo-Chr15:27024539 0 dispersed
Blo12g00082 Blo-Chr12:5523264 Blo02g00869 Blo-Chr2:33613475 1.39E-65 dispersed
Blo16g00906 Blo-Chr16:36928002 Blo02g00869 Blo-Chr2:33613475 5.42E-61 dispersed
Blo02g00869 Blo-Chr2:33613475 Blo01g00398 Blo-Chr1:4515469 2.79E-107 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00869 K17761 - twl:119988855 762.296