Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00911 ATGGATCTAGAGACAGAAAATAGGATAGCAGCAATTCTCATGAAAGAAGCAGCTGAATTACGCCGTCAAGCTGAGAAGGATGGGGTTCACGTCTATCTTCAGCAACCTAAAGTTAGGGGGCGAGCAAATTCACGTTTCCTGACTGCAACTGTTCTTGGGGTTCAACAAGCCAATCGAGCTGTGGAAGTGAATGAAATGTGGCGAGTTCGACAAAAGGAGCTGGAACTGGATGACAGGCTGAGAGGCAAGCTGAGGGAAGAGGACAACAGCAGAACGATCGTTAGAGATAATAATAGATCACATAGAAATTTAACTGAGAACGATGTCATAAAAGATGACAATGCTACTAGTTCATGCTCTTCAAACAAAAGAGTTTTGGAGACTTGCCGTTTGAAGGAGGATGAAGGTTTAAAGGATGATGAACTCCATGAATTTCTCCATTCAAGGGTCAAGCGTGGTAGAGGCGGCATTGGGTCAAGGATGGACGAAACAGGCCCTTACTTGCCCCCCCGTCTGGAGTCAAATTCAGATCTTGAAGCAGGGTTTGATGTAACAAAACGCCGGGTTATATACGGGCCAGACAAGGCTTTTTCCGCGAAGTCATATGAATCTTCTGAAGAAGAGTCTGTTGATCGTCCTAGGAAGAGTTCGAGTTCAAAGAGGAAAAGTTTGGATAAACAGCATCCAAACAAGCACTGTTCTAAGTCCAAGTCTAAGAAAAAAGAGAGGAAGGAGAAGAGAAGCAGCAGCATCAGCAAGAGCAAGCATCATAGTGCAGGATTTGTTGGTGATTCCCTTAATAGGAATATGTTTGTATCGCTCTTCTGCTCTCTTAAACGTGTGTCAAGCGATGTGAAGAAGTGGCGCCCTGCTGGTGCCGATCGTGGATATACGTTTCTTAAGTATAATCTTACAATTTCATATCATCGAACGTATCTTTTGGCGCGTTATCATAGGTGGTCTGCTAATGTACATGGTGGGGAATTGGAATCCATTGGATTCAAGGAGGGCTTTAGGGTTGATGTTGACATCGCAGAAGGTACATGGATACAGACGCCACGTTTTCATGACATTATAATCTTCAACACAGGACACTGGTGGTGGGCGCCCTCGAAATTTGACCCTGTTAAATCACCCTTGCTCTTCTTTGAAAATGGTCAGCCTGTTATCCCTCCCATACCTCCTGATGTTGGATTGGACTTGGTTTTGAAACACATGATTTCATATGTGAAGAAACAAATGCGGCCAAATACAATCATATTCTTTCGTACTCAGTCGCCAAGACATTTCGAAGGAGGTGATTGGGACCAAGGCGGTTCTTGTCCGCTGCTACAACCTTTGTTGTCAGAACAGGTCGAGGAGCTCTTTGCTGTGAACAAAAATGGGACAAACGTGGAGGGTCGGCTGGTGAACCGGCACCTCTATGAAGCCATTAAAGGCTCTGGTTTCAATGTTTTGGACATAACCAAGATGAGCGAGCTAAGAGCCGATGCTCATCCATCTTCAGCAGGTGGTAAGAAACACGACGATTGTATGCATTGGTGCTTACCGGGGATTACAGACACTTGGAATGACTTATTTGTACAGTATTTGGACAACATGAAATTTAGAAACTAA 1617 44.4 MDLETENRIAAILMKEAAELRRQAEKDGVHVYLQQPKVRGRANSRFLTATVLGVQQANRAVEVNEMWRVRQKELELDDRLRGKLREEDNSRTIVRDNNRSHRNLTENDVIKDDNATSSCSSNKRVLETCRLKEDEGLKDDELHEFLHSRVKRGRGGIGSRMDETGPYLPPRLESNSDLEAGFDVTKRRVIYGPDKAFSAKSYESSEEESVDRPRKSSSSKRKSLDKQHPNKHCSKSKSKKKERKEKRSSSISKSKHHSAGFVGDSLNRNMFVSLFCSLKRVSSDVKKWRPAGADRGYTFLKYNLTISYHRTYLLARYHRWSANVHGGELESIGFKEGFRVDVDIAEGTWIQTPRFHDIIIFNTGHWWWAPSKFDPVKSPLLFFENGQPVIPPIPPDVGLDLVLKHMISYVKKQMRPNTIIFFRTQSPRHFEGGDWDQGGSCPLLQPLLSEQVEELFAVNKNGTNVEGRLVNRHLYEAIKGSGFNVLDITKMSELRADAHPSSAGGKKHDDCMHWCLPGITDTWNDLFVQYLDNMKFRN 538
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35187054 35196335 + BLOR10641 Blo02g00911 57141

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00911 538 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 254 529 IPR026057 GO:0016740
Blo02g00911 538 Coils Coil 3 23 - -
Blo02g00911 538 MobiDBLite consensus disorder prediction 225 253 - -
Blo02g00911 538 MobiDBLite consensus disorder prediction 201 224 - -
Blo02g00911 538 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 13 253 536 IPR029968 -
Blo02g00911 538 MobiDBLite consensus disorder prediction 153 175 - -
Blo02g00911 538 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 253 536 IPR029962 GO:0016413
Blo02g00911 538 MobiDBLite consensus disorder prediction 201 258 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00911 - - - csin:114261045 494.582
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00911 Blo-Chr2:35187054 Blo03g00045 Blo-Chr3:1771732 2.90E-65 dispersed
Blo02g00905 Blo-Chr2:34998358 Blo02g00911 Blo-Chr2:35187054 5.70E-19 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g810 Blo02g00911 . . . . . Bma05g00632 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cmo16g00313 . . . . Cpe14g00244 . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008103 1 1 1 2 1 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 0 1 2 1 1 35
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo02g00911 Blo_Chr02 FPKM 14.42418 15.930441 10.293104 10.663897 4.95468 4.497257 5.334686 6.766153 7.051219 7.34486