Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00944 ATGGCAGAGGCTAATCACAGTAATATTTCTCCAGCTGCAGTGAGTGGTGGCATTGAAAAATGTACTCGCCCCTCTCCAAGTTCTTTGGGCCCAAGTCATCTGCACAATGAACCAGCAAAGCAGAATTACACAGAAACATCAAATTTTGTTGATGAAGATTCACAATTTTCTGATGATAGAGCAGATAATTCTGCGGCTGAAAAATTGGAATTGTCCTATGAGATTCTCATTAGAAATCATCAATGCAAGAATAGTTCATACCTCAATCAAATTAATCCAGAACAAACAGCTGAATCTGTTCATACAAGTGTGCTTATTGAATCAACAGAACAAAAACGTGAATCAATTAATAGGGGCACGCTGATATCTAATGTTGATGGGGATCAATCTTTAGTATATTCTAATAATGTGAATCAAGATTACTTGGCACAAGCTTTGGAGCTACCTCTTGATGTGAAAAGAAATAGTCAGATTGATGATAAGAGACTTGGTGATGATGAGGGTTGCTCTACAGGGACAACGAGGAAACTGTTGAACAATCAATCAGACTTGAATTATCATGACATTGAATCAGTAAAAAATCTGCCACAAAAAACTAGCCCTGAAGAACAGACAGAAGTCCAACAGAATATATTGCAACAGACACAAGTAGAGATCTCTGAAGAACTTTTAAGTAAACTGTCAGAGAAAAATCATCTCAGTGATTCTGAACTTGCTCAAAATAATCCAGCTGGGGTTGATGTTATTCAAGAATTTGAGCCGCATTTTGCTGATTGTTCTCTGGATGATGTTCTTAAACTTCCTTTTGTAGATGCATCAAATTCAGATAATCAGTCAAAATCATTTGTCGAAGATAGCATTAATGAGTTAAAAACGCCAATTAAAAGATCAGCCAAGGATTCTAAACAAGTTAGCTGTCAAGCTTCAAAATCTAGGCAGAAAAAATATATATTGAGATCACTGGGTCACACTGACAGGGTATTGCGCTCAAGAACACAAGGGAATGCCACAGCTTCTAAACCAAGGAATCCTGTCAGTAGTGCTAGATGTGAAGTAGATGGAAAAAGTAGGAAGAAAGAAAGAATAAAGAAGACTAAAGTGGCAGACGAGTTTTCAAAAATTAGAAATTGCCTAAGATATTTCCTCAATCGAATGGCATATGAACAAAGCTTCATTGCTGCTTATTCTGGTGAAGGTTGGAAAGGATACAGCTTAGAGAAGTTAAAGCCAGAGAAGGAGCTTCAACGGGCCACAAGTGAAATAATGCGACGGAAATTGAAAATAAGAGATCTTTTTAAACACCTTGATTCACTTGGTGTTGATGGAAGGTTTCCAGAGTCTCTGTTTGATTCTGAAGGACAAATCGACAGTGAGGATATATTCTGTGCGATATGTGGATCCAAAGAAATGTCTGCTAATAATGACATTATACTCTGTGATGGTGCTTGTGATCGCGGATTTCACCAGCTCTGTTTAGACCCACCATTGCTGATTGAAGATATTCCCCCAGATGATGATGGTTGGCTATGCCCAGGATGTGATTGCAAAGTTGACTGCATTGATTTGCTTAATGACTCTCAAGGAACGAATTATTCTCTCACTGACAGTTGGGAGAATATTTATCCTGAGGCTGCTGTTGTAGCTGCTGGACAAAGTCATGATCTGACCTTGGGTCTCCCTTCAGATGATTCGGATGATAATGATTTTGATCCAGATGATCCAGAAACTGATGAGCAGGGAGATGAATCGCGTCCTGTTGTATCTGATAATAATATTGAATCTGAAAAATTGGTGGCTTCGCCTAAAAACAACCAATATCTGGGACTTCCTTCTGATGATTCGGATGATGATGATTATAATCCCGGGGCTCCAGATACTGAAGAGAAGATTAAGTCAGAAAGTTCGAGTTCTGATTTTACTTCTGATTCTGAGAATCTTGCAGCCATTTTTGAAGATGATAGGCCTTCTAGGAATGAAGATGAGTCTGTCTCTTCATCAGTGAATGGTACCTGTTCTCATATAGGCATTGACAAAAAAAGCTGCAAACGTGGTCTAGGAAAGCATTCATTGAATGATGAGCTTTCTTCTATACTAAATTTGGAACCTCTTAATGATGGACTTTCACCTATTGCCAGCAGACGCCATGTGCAACGATTGGACTATAAGAAGCTCCATGATGAGACATATGGAAATATTTCTTCCGACTCAAGTGATGATGATGTTGATTGGAATGATGTTGCTGCTCGGAGAAAGACAAGTTGTCGAATAGTCTCTCCAGCTGAACAAAATGGAAATTTTTCAGTGGTAAAGAAGGGACATAAAGTTATGGGTAAGAATTATGTAAAGGGGAGTGAGATCACTTCAAAAAGGAGTGCTCGTCGCAGACAAACTGTTGACGTGACAAATGATTCTTCGATTAAAGTACAAGAAGGATCTTCCAAGTCGTGTTCAGCTGGTAGAAGAGCCAAATCATCTGCTTACAGTAAACTTGGGGAAGCTGTAATTCAGAGACTTCGTTTATCATTTGAAGAAAATCAGTACCCTGAAAAACATACGAAAGAAAGTTTGGCTCAAGATCTAGGACTCAGCTTCAAGCAGGTCAGCAAATGGTTTGAAAATACTCGTTGGAGTACTCGTCATCCAACGAATGCAAAAGCAAATGGAAACACAAACGAAGATAAATCTGAAAGCCCTCCAAACAAAGTCACTCCAGTGTCTCGCTCAACCAGAAAACTTAAGCCAGAATTGGATGGCACTCACAACAGTGCTTATCTCATAAAATCTCCCAAAGCCAGTGTTGTTATTCCACAATGCCAAAGTGGAGATACAAAGGATGGCATTTTGGTGAGTCATAAAAACACTAAACAAGAACCTAATTCCATTAAATCCAGAAAGAGAAAAGGGAGATCAGGCGATCTGGCCATCGATACTGATGTTAGTATGATAGAGATACGAAAGCCTCTTGCTGTGTCATCAGAAGCTCATGAAGGTCGAGCTAATGATCGGATTAGGACAAGAAAACGGAAAATGGTTGCTTCCAATACTGATGTTAATACTTTAGAGACTCGAAAGCTCCGTTCTCGGTCAAAGAAAGCCAACGAAGATCGAGAAAATCACCGGATTTGGACAAGAAGACGGAAGTTGATTGTTTAA 3153 39.17 MAEANHSNISPAAVSGGIEKCTRPSPSSLGPSHLHNEPAKQNYTETSNFVDEDSQFSDDRADNSAAEKLELSYEILIRNHQCKNSSYLNQINPEQTAESVHTSVLIESTEQKRESINRGTLISNVDGDQSLVYSNNVNQDYLAQALELPLDVKRNSQIDDKRLGDDEGCSTGTTRKLLNNQSDLNYHDIESVKNLPQKTSPEEQTEVQQNILQQTQVEISEELLSKLSEKNHLSDSELAQNNPAGVDVIQEFEPHFADCSLDDVLKLPFVDASNSDNQSKSFVEDSINELKTPIKRSAKDSKQVSCQASKSRQKKYILRSLGHTDRVLRSRTQGNATASKPRNPVSSARCEVDGKSRKKERIKKTKVADEFSKIRNCLRYFLNRMAYEQSFIAAYSGEGWKGYSLEKLKPEKELQRATSEIMRRKLKIRDLFKHLDSLGVDGRFPESLFDSEGQIDSEDIFCAICGSKEMSANNDIILCDGACDRGFHQLCLDPPLLIEDIPPDDDGWLCPGCDCKVDCIDLLNDSQGTNYSLTDSWENIYPEAAVVAAGQSHDLTLGLPSDDSDDNDFDPDDPETDEQGDESRPVVSDNNIESEKLVASPKNNQYLGLPSDDSDDDDYNPGAPDTEEKIKSESSSSDFTSDSENLAAIFEDDRPSRNEDESVSSSVNGTCSHIGIDKKSCKRGLGKHSLNDELSSILNLEPLNDGLSPIASRRHVQRLDYKKLHDETYGNISSDSSDDDVDWNDVAARRKTSCRIVSPAEQNGNFSVVKKGHKVMGKNYVKGSEITSKRSARRRQTVDVTNDSSIKVQEGSSKSCSAGRRAKSSAYSKLGEAVIQRLRLSFEENQYPEKHTKESLAQDLGLSFKQVSKWFENTRWSTRHPTNAKANGNTNEDKSESPPNKVTPVSRSTRKLKPELDGTHNSAYLIKSPKASVVIPQCQSGDTKDGILVSHKNTKQEPNSIKSRKRKGRSGDLAIDTDVSMIEIRKPLAVSSEAHEGRANDRIRTRKRKMVASNTDVNTLETRKLRSRSKKANEDRENHRIWTRRRKLIV 1050
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 36717141 36722841 + BLOR10674 Blo02g00944 57174

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00944 1050 MobiDBLite consensus disorder prediction 942 971 - -
Blo02g00944 1050 MobiDBLite consensus disorder prediction 942 956 - -
Blo02g00944 1050 MobiDBLite consensus disorder prediction 21 40 - -
Blo02g00944 1050 MobiDBLite consensus disorder prediction 159 204 - -
Blo02g00944 1050 SUPERFAMILY Homeodomain-like 830 882 IPR009057 -
Blo02g00944 1050 ProSitePatterns Zinc finger PHD-type signature. 462 513 IPR019786 -
Blo02g00944 1050 MobiDBLite consensus disorder prediction 555 644 - -
Blo02g00944 1050 ProSiteProfiles 'Homeobox' domain profile. 821 881 IPR001356 GO:0003677
Blo02g00944 1050 SMART PHD_3 461 514 IPR001965 -
Blo02g00944 1050 Gene3D - 825 893 - -
Blo02g00944 1050 SMART HOX_1 819 885 IPR001356 GO:0003677
Blo02g00944 1050 MobiDBLite consensus disorder prediction 328 357 - -
Blo02g00944 1050 ProSiteProfiles Zinc finger PHD-type profile. 459 516 IPR019787 -
Blo02g00944 1050 MobiDBLite consensus disorder prediction 798 822 - -
Blo02g00944 1050 MobiDBLite consensus disorder prediction 561 579 - -
Blo02g00944 1050 ProSitePatterns 'Homeobox' domain signature. 856 879 IPR017970 GO:0000981|GO:0006355
Blo02g00944 1050 PANTHER HOMEOBOX PROTEIN HAT3.1 226 952 - -
Blo02g00944 1050 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 455 518 IPR013083 -
Blo02g00944 1050 MobiDBLite consensus disorder prediction 785 823 - -
Blo02g00944 1050 MobiDBLite consensus disorder prediction 1 40 - -
Blo02g00944 1050 MobiDBLite consensus disorder prediction 593 610 - -
Blo02g00944 1050 CDD PHD_PRHA_like 461 513 IPR045876 -
Blo02g00944 1050 MobiDBLite consensus disorder prediction 875 923 - -
Blo02g00944 1050 CDD homeodomain 835 881 IPR001356 GO:0003677
Blo02g00944 1050 Pfam Homeodomain 834 876 IPR001356 GO:0003677
Blo02g00944 1050 MobiDBLite consensus disorder prediction 172 204 - -
Blo02g00944 1050 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 226 952 - -
Blo02g00944 1050 SUPERFAMILY FYVE/PHD zinc finger 451 519 IPR011011 -
Blo02g00944 1050 MobiDBLite consensus disorder prediction 957 971 - -
Blo02g00944 1050 MobiDBLite consensus disorder prediction 328 344 - -
Blo02g00944 1050 MobiDBLite consensus disorder prediction 875 907 - -
Blo02g00944 1050 Pfam PHD-finger 461 516 IPR019787 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00944 - - - qlo:115967836 647.891
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo02g00944 Blo03g00085 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00944 Blo-Chr2:36717141 Blo01g00125 Blo-Chr1:1690653 1.66E-06 dispersed
Blo02g00944 Blo-Chr2:36717141 Blo03g00085 Blo-Chr3:2836195 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g656 Blo02g00944 Blo03g00085 Bda06g01216 Bda08g00666 Bpe07g00262 . Bma05g00672 . . . . . . . . . . . . . . . . . . . . . . . . . . Cone3ag1009 Cone10ag1026 . . . . . . . . . Bpe05g00488 . . . Cmo04g00496 Cmo16g00355 . . . . Cpe14g00278 Cpe01g00416 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003741 2 4 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 4 1 1 45
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12049 PF00628 PHD 4.70E-11 CL0390 Blo TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo02g00944 Blo_Chr02 FPKM 5.171671 5.565378 17.865353 17.262379 1.001388 1.026069 1.430543 0.0 0.0 0.0