Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00956 ATGAAAAAAGGTTTCCAGACCACGGTGAAGCAGCTCGAAGAAGCGGAAAAGCAGCTCGAAGAATCGGAAACAGTTTCCGATCAGTTGCTCCTCTTCGACGGCGACCGACCAATATTCTTCGGCGCTCCATTTTTGGCTAAGTCGCAACGCAGTGGAGATTGGAAGTGGAAAAATGAAGGTGGGAAAGTCGCGACTACAAGAAAGGAGGAGTCGGCGATGGTGGAACGGGAAGAGCCAGCGACAATGGAAATGAAGGAGCCGGCGACGGTGGAAATGGAGGAACTGGTGTCAGTGGAAATGGATGAGCTGGCTGTGGAAAAAACTATATCCGCAAAGAATGAAGAACAAAAATGCAACCCATTTCCAGAAACAGAATGCAACATCTTTCCAGAAGCCCTAACGTGGTCCAAAGGAATTATTGGACCAATTCCAACTCTGGCCCATTTGGATAAAAATAAAGGTTTAAAGAAAGATAGTTTTTTAATAAAGAGTAGTTTGTGGGGAGTTACTAAGAACTTGAATGACTTGATTAGTGAGAAAGTGTCCTACTTGATGTACTGTGAGTTGATAATTCGTAATAAAGATTTGGTTTCTTATCAGTATCTTGATGTGATGCTTAAGATGGGTGAGTATGAAATTCAACCAACTGCAGAAAAATCTCATCGTGATCTTCAACAGACACCAAGTTTTAGTGGTCCTTTAATGCTGCCAAACCGTGCTTCAGCAAACAGCTTATCAGCACCAATAAAATCTTCTGGAGGTAGATATAGAGATTCATTAGATGACAAGTCAAAGGCTAATCTTGTGCAAATTAAAGGGCGGTTTTCTGTGACATCAGAAAACTTAGATCTTGCTAAGGATATTCCACTAAGTACAGTACCACGTCGGACTTCCCAGGGATCACCACTAAGAAAATCAGCTAGTGTTGGTGATTGGATATCTGACTCAAAACAAATGCTCGTCAGTCAATCCCAAGAGGTGCTTTCCAACAGTAATATACCTGCTACTCTTCTCATGACTCACCTGCAGACTCTTTTTCAGCAGACCTCAATTCAACAGGATCTTATATTCAATTTGTTTAATACCCTCCAACCAACTGCTACTCAAAATGGAAAGTTGCTTCCATTGCCTCGAAGCTCGGAGAACAATGGAAGTGTTGAAATGGTGTCTCCTGAGAGAGAGCGCTTATTGCAACTGAGGATCTCAGAACTTCAAGCTAGGTTCACCGGATTAACGTGGGATTCGAACCAATTTAATTTGTCAACTAATTGA 1272 42.14 MKKGFQTTVKQLEEAEKQLEESETVSDQLLLFDGDRPIFFGAPFLAKSQRSGDWKWKNEGGKVATTRKEESAMVEREEPATMEMKEPATVEMEELVSVEMDELAVEKTISAKNEEQKCNPFPETECNIFPEALTWSKGIIGPIPTLAHLDKNKGLKKDSFLIKSSLWGVTKNLNDLISEKVSYLMYCELIIRNKDLVSYQYLDVMLKMGEYEIQPTAEKSHRDLQQTPSFSGPLMLPNRASANSLSAPIKSSGGRYRDSLDDKSKANLVQIKGRFSVTSENLDLAKDIPLSTVPRRTSQGSPLRKSASVGDWISDSKQMLVSQSQEVLSNSNIPATLLMTHLQTLFQQTSIQQDLIFNLFNTLQPTATQNGKLLPLPRSSENNGSVEMVSPERERLLQLRISELQARFTGLTWDSNQFNLSTN 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37040593 37047624 - BLOR10686 Blo02g00956 57186

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00956 423 Coils Coil 2 25 - -
Blo02g00956 423 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 209 414 - -
Blo02g00956 423 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 209 414 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00956 - - - hbr:110665919 293.893
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00931 Blo-Chr1:21691183 Blo02g00956 Blo-Chr2:37040593 4.84E-06 dispersed
Blo02g00956 Blo-Chr2:37040593 Blo09g00164 Blo-Chr9:5230056 1.03E-32 dispersed
Blo02g00956 Blo-Chr2:37040593 Blo07g01038 Blo-Chr7:30227335 9.24E-16 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Blo03g00674 . 41 705 MAP Kinase Kinase Kinase Kinase AT1G53165 61.3 1.6e-205 713.0
Blo01g00457 . 257 526 MAP Kinase Kinase Kinase Kinase AT1G53165 51.7 6.8e-68 255.8
Blo03g00674 . 41 704 MAP Kinase Kinase Kinase Kinase AT3G15220 64.4 2.0e-224 775.8
Blo01g00457 . 257 526 MAP Kinase Kinase Kinase Kinase AT3G15220 50.6 9.8e-67 251.9
Blo01g00457 . 9 853 MAP Kinase Kinase Kinase Kinase AT1G69220 57.5 2.5e-239 825.5
Blo03g00674 . 42 275 MAP Kinase Kinase Kinase Kinase AT1G69220 52.3 1.2e-63 241.9
Blo17g00301 BCT 1 639 MAP Kinase Kinase Kinase Kinase AT5G14720 62.4 2.9e-228 788.5
Blo07g00676 CCT 3 392 MAP Kinase Kinase Kinase Kinase AT5G14720 61.5 5.3e-142 501.9
Blo02g00957 . 3 354 MAP Kinase Kinase Kinase Kinase AT5G14720 68.3 3.5e-141 499.2
Blo02g00957 . 5 488 MAP Kinase Kinase Kinase Kinase AT4G24100 66.9 1.7e-178 623.2
Blo17g00301 BCT 6 353 MAP Kinase Kinase Kinase Kinase AT4G24100 64.9 1.5e-134 477.2
Blo18g00333 BCT 6 317 MAP Kinase Kinase Kinase Kinase AT4G24100 57.1 1.3e-109 394.4
Blo02g00956 . 224 412 MAP Kinase Kinase Kinase Kinase AT4G24100 62.6 1.6e-51 201.4
Blo02g00957 . 6 474 MAP Kinase Kinase Kinase Kinase AT4G10730 68.9 5.4e-182 634.8
Blo05g00167 CCT 4 587 MAP Kinase Kinase Kinase Kinase AT4G10730 50.1 1.2e-144 510.8
Blo17g00301 BCT 7 376 MAP Kinase Kinase Kinase Kinase AT4G10730 63.8 1.4e-137 487.3
Blo18g00333 BCT 7 335 MAP Kinase Kinase Kinase Kinase AT4G10730 56.6 5.9e-112 402.1
Blo02g00956 . 207 412 MAP Kinase Kinase Kinase Kinase AT4G10730 55.7 1.2e-48 191.8
Blo17g00301 BCT 5 351 MAP Kinase Kinase Kinase Kinase AT1G70430 71.2 1.6e-145 513.5
Blo05g00167 CCT 4 348 MAP Kinase Kinase Kinase Kinase AT1G70430 62.3 6.6e-128 454.9
Blo18g00333 BCT 1 411 MAP Kinase Kinase Kinase Kinase AT1G70430 53.3 1.8e-120 430.3
Blo02g00957 . 6 371 MAP Kinase Kinase Kinase Kinase AT1G70430 56.6 3.7e-118 422.5
Blo05g00167 CCT 1 594 MAP Kinase Kinase Kinase Kinase AT1G79640 61.2 6.7e-206 714.1
Blo07g00676 CCT 1 682 MAP Kinase Kinase Kinase Kinase AT1G79640 54.6 1.0e-193 673.7
Blo17g00301 BCT 4 360 MAP Kinase Kinase Kinase Kinase AT1G79640 68.1 1.4e-147 520.4
Blo02g00957 . 5 354 MAP Kinase Kinase Kinase Kinase AT1G79640 64.3 1.6e-135 480.3
Blo18g00333 BCT 6 317 MAP Kinase Kinase Kinase Kinase AT1G79640 60.3 1.1e-120 431.0
Blo17g00301 BCT 1 328 MAP Kinase Kinase Kinase Kinase AT1G23700 56.8 3.1e-99 359.4
Blo05g00167 CCT 5 324 MAP Kinase Kinase Kinase Kinase AT1G23700 51.7 2.3e-86 316.6
Blo02g00957 . 14 303 MAP Kinase Kinase Kinase Kinase AT1G23700 51.5 7.3e-77 285.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005064 3 0 2 2 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 3 2 1 41
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo02g00956 Blo_Chr02 FPKM 33.856556 35.674789 39.23505 36.97649 1.35039 2.375165 1.267689 2.005816 2.248644 1.506206