Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00982 ATGAGTTTTCAAGATATCGAGGCGGGCCGGCCCTATGCTTATTCGAAGCGGGAAGCCATCAATGGCAAGCAGGACCCGACACAAGCCGTCGCCTCTGGTGTATTTCAGATCAACACAGCCGTTGCTACCTTTCAGAGGCTCGTCAATACCTTAGGAACTCCGAAGGACACCCCCGAGCTCCGAGAGAAGCTGCATAAGACAAGGCTTCATATTGGACAGTTGGTGAAAGATACTTCTGCCAGACTTAAACAAGCGAGTGAAATAGATCATCAGACTGAAGTTAAAGCCAGCAAGAAAATTGCAGATGCAAAACTTGCCAAAGACTTTCAAGCGGTGTTGAAAGAATTTCAAAAGGCTCAACGACTTGCGGCTGAGAGAGAAACTGCATATACTCCTTTTGTTCCCCAAGCAGTTCTCCCTTCCAGCTACACAGCCAGCGAGATTGATGTACGACCAGATAAGACTCCTGAGCAGCGTGCACTCCTTGTGGAGTCTAGGAGACAAGAAGTATTGCTTTTGGACAATGAAATTGTCTTCAACGAGGCGATAATTGAGGAAAGAGAGCAGGGGATTGAAGAAATACAACAACAAATTGGTGAAGTAAATGAGATTTTCAAAGATTTGGCTGTTCTGGTCCACGAGCAGGGAGCCATGATTGATGACATTGGATCTAACATCGAAAGTTCCCATGCGGCTACTGCACAAGGAACGTCCCAACTTGTCAAAGCCTCAAAGGCACAAAGATCAAATTCATCTCTGTCCTGCTTACTCTTGGTGATATTTGGGATTTTGCTTCTCATTGTGATCATACTTGTGGCTGCTTAA 825 45.7 MSFQDIEAGRPYAYSKREAINGKQDPTQAVASGVFQINTAVATFQRLVNTLGTPKDTPELREKLHKTRLHIGQLVKDTSARLKQASEIDHQTEVKASKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTASEIDVRPDKTPEQRALLVESRRQEVLLLDNEIVFNEAIIEEREQGIEEIQQQIGEVNEIFKDLAVLVHEQGAMIDDIGSNIESSHAATAQGTSQLVKASKAQRSNSSLSCLLLVIFGILLLIVIILVAA 274
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37993441 37997352 + BLOR10712 Blo02g00982 57212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00982 274 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 181 243 IPR000727 -
Blo02g00982 274 Pfam SNARE domain 218 269 IPR000727 -
Blo02g00982 274 SUPERFAMILY t-snare proteins 24 236 IPR010989 GO:0016020|GO:0016192
Blo02g00982 274 SMART tSNARE_6 176 243 IPR000727 -
Blo02g00982 274 SMART SynN_4 15 128 IPR006011 GO:0016020
Blo02g00982 274 Gene3D - 174 274 - -
Blo02g00982 274 CDD SNARE_Qa 184 242 - -
Blo02g00982 274 Gene3D - 18 134 - -
Blo02g00982 274 CDD SynN 24 149 IPR006011 GO:0016020
Blo02g00982 274 PANTHER SYNTAXIN OF PLANTS PROTEIN 7 273 - -
Blo02g00982 274 ProSitePatterns Syntaxin / epimorphin family signature. 187 226 IPR006012 GO:0005484|GO:0006886|GO:0016020
Blo02g00982 274 PANTHER SYNTAXIN 7 273 IPR045242 -
Blo02g00982 274 Pfam Syntaxin-like protein 31 130 IPR006011 GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00982 Blo-Chr2:37993441 Blo18g00562 Blo-Chr18:7935770 5.22E-87 dispersed
Blo02g00982 Blo-Chr2:37993441 Blo03g00106 Blo-Chr3:3337321 7.11E-147 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00982 - K08488 bhj:120089793 414.075