Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00983 ATGGGTACTCTTTGTGATGGCTTTGGTAATATGGCTATGCACATCAAGATTGCAGAGGACAGCTTCATGGATTTGTACACTGCTCTGAGTGTAATTCTACCTGGTTTCAGGAAGGTTGATCCAGATCGCTGGGAATTTGCTAACGAAGGTTTCCTAAGGGGTCAGAAACACCTGCTTAAAAGCATCAATCGACGAAAGCCTGCTCATGGACAAAGTCAGCCACCACAGCAATCTCAAGTACAAAACTCATCTCCATCTGTGGGGGCTTGTGTAGAGGTTGGAAAGTTTGGTCTTGAAGAGGAGGTTGAGAGGCTTAAGAGAGACAAGAATGTGCTCATGCAGGAACTTGTCAGGCTTAGGCAGCAGCAACAGACTACTGATAACCAGCTACAAGTTATGGTGCAGCGTTTGCAGGGAATGGAACAAAGGCAGCAGCAGATGATGTCATTCCTGGCAAAAGCTGTGCAAAGCCCTGGATTTTTATCTCAGTTTGTACAGCAGCAAAATGAGAGTAGTAGACGCATAAGTGAAGCCAACAAAAAGCGCAGGCTTAAGCAGGATGGAATTGCTGAGTCTAATCTTTCTTCAGCTCCTGATGGACAGATTGTAAAATATCAACCCTTTATGAATGACTCAGCAAAGGCAATGATGAGGCAGATAATGAACATGGATACTTCACGGGTTGGATCTTTTAGCACCAATTCAGATAGTTTCTTGATTGGCAATGGCTTGTCACAATCGGCAGCTATTGATAGTGGAAGCTCTACCAGCTGTGTATCAGGAGTGACTCTCCAAGAGGTGCCCCCAACTTCAGGGAAACTATCTTATGTTGCAGCTGATTCTGGCATCTCAGACTCCCCTTCCTTTTCAACTTCTCAGAGAGATGTAATCCCCGAGCTTTCTGAAATGCCAGAAGTGCCTGAGAGTATTGGGGATGTTTCAAATGAAGGTTATATGCGACAAGAAACGGACAATGACGGATATATTGATTCAGATTCATTGGATGTAAGTGGGATAATTCCCATAGATATGGACAATATATCAAACGATCCTGACATTGATGCTTTGATTGACAATACCTTGATGGATAATTCAAACTTCTGGAGTGAACTCTTCCAAAGCCCAGTGGAAGAACTTGAAGCAAACTTGGGAGAAGGATTCTCCCTAGAAAATGGCGCTGTTCAGATGGAGAATGGATGGGACAAATTTCAGTTTATGGATAAACTTACGACACAGATGGGCCTTCTTACATCAAATATCAAAAAGGATTGA 1272 43.32 MGTLCDGFGNMAMHIKIAEDSFMDLYTALSVILPGFRKVDPDRWEFANEGFLRGQKHLLKSINRRKPAHGQSQPPQQSQVQNSSPSVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQTTDNQLQVMVQRLQGMEQRQQQMMSFLAKAVQSPGFLSQFVQQQNESSRRISEANKKRRLKQDGIAESNLSSAPDGQIVKYQPFMNDSAKAMMRQIMNMDTSRVGSFSTNSDSFLIGNGLSQSAAIDSGSSTSCVSGVTLQEVPPTSGKLSYVAADSGISDSPSFSTSQRDVIPELSEMPEVPESIGDVSNEGYMRQETDNDGYIDSDSLDVSGIIPIDMDNISNDPDIDALIDNTLMDNSNFWSELFQSPVEELEANLGEGFSLENGAVQMENGWDKFQFMDKLTTQMGLLTSNIKKD 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38003864 38005836 - BLOR10713 Blo02g00983 57213

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00983 423 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 35 315 IPR027725 -
Blo02g00983 423 MobiDBLite consensus disorder prediction 171 195 - -
Blo02g00983 423 MobiDBLite consensus disorder prediction 65 86 - -
Blo02g00983 423 MobiDBLite consensus disorder prediction 174 188 - -
Blo02g00983 423 Coils Coil 95 122 - -
Blo02g00983 423 MobiDBLite consensus disorder prediction 66 86 - -
Blo02g00983 423 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-1 35 315 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00983 K09419 HSFF; heat shock transcription factor, other eukaryote - pop:18094138 434.106
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00983 Blo-Chr2:38003864 Blo06g00420 Blo-Chr6:24232472 7.70E-43 dispersed
Blo02g00983 Blo-Chr2:38003864 Blo05g00378 Blo-Chr5:4528404 1.70E-44 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g706 Blo02g00983 . . . . Bpe07g00232 . . . . . . . . . . . . . . . . . . . . . . . . . Cone8ag0482 Cone12ag0477 . . . . . . . . . . . . . Bma12g00234 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Blo18g00282 . 17 245 HSF AT4G17750 52.1 7.8e-58 221.9
Blo05g00378 . 38 238 HSF AT4G17750 54.2 1.2e-55 214.5
Blo17g00285 . 39 225 HSF AT4G17750 53.7 8.1e-55 211.8
Blo02g00237 . 9 207 HSF AT4G17750 52.7 2.0e-53 207.2
Blo01g01525 . 17 115 HSF AT4G17750 71.7 4.0e-38 156.4
Blo12g00960 BCT,CCT 734 832 HSF AT4G17750 69.7 2.6e-37 153.7
Blo02g01100 . 30 125 HSF AT4G17750 70.8 9.9e-37 151.8
Blo02g00983 . 35 271 HSF AT5G16820 64.7 4.0e-67 252.7
Blo05g00378 . 37 244 HSF AT5G16820 53.5 1.4e-56 217.6
Blo18g00282 . 40 226 HSF AT5G16820 55.8 5.1e-54 209.1
Blo02g00237 . 11 206 HSF AT5G16820 53.1 1.6e-52 204.1
Blo18g00282 . 25 226 HSF AT1G32330 52.2 6.0e-55 212.2
Blo02g00237 . 3 189 HSF AT1G32330 50.7 3.2e-48 189.9
Blo01g01525 . 15 114 HSF AT1G32330 70.0 2.0e-37 154.1
Blo12g00960 BCT,CCT 732 831 HSF AT1G32330 68.0 1.3e-36 151.4
Blo18g00282 . 40 228 HSF AT3G02990 55.4 1.2e-55 214.5
Blo02g00237 . 11 209 HSF AT3G02990 52.9 5.5e-53 205.7
Blo01g01525 . 5 130 HSF AT3G02990 58.9 2.5e-37 153.7
Blo17g00285 . 30 246 HSF AT2G26150 58.3 3.9e-72 268.9
Blo11g00264 BCT 7 382 HSF AT4G18880 50.6 3.1e-89 325.9
Blo01g01525 . 14 129 HSF AT4G18880 62.1 1.8e-36 150.6
Blo02g00237 . 5 475 HSF AT4G13980 55.1 1.5e-127 453.4
Blo18g00282 . 26 254 HSF AT3G22830 56.0 4.4e-67 252.3
Blo17g00285 . 30 232 HSF AT3G22830 53.3 9.0e-60 228.0
Blo05g00378 . 26 314 HSF AT3G51910 51.6 4.2e-69 258.5
Blo16g00980 BCT 167 373 HSF AT5G54070 51.0 1.4e-50 197.2
Blo15g00160 . 14 120 HSF AT4G36990 63.6 4.0e-38 155.6
Blo12g00576 . 13 112 HSF AT4G36990 65.0 1.7e-36 150.2
Blo02g01100 . 26 326 HSF AT4G11660 52.3 7.2e-80 294.7
Blo01g01525 . 13 116 HSF AT4G11660 75.0 1.7e-44 177.2
Blo12g00960 BCT,CCT 730 833 HSF AT4G11660 71.2 1.6e-42 170.6
Blo12g00576 . 13 111 HSF AT4G11660 70.7 4.0e-38 156.0
Blo12g00576 . 18 212 HSF AT2G41690 54.6 4.9e-45 178.3
Blo01g01525 . 16 340 HSF AT1G46264 56.8 3.8e-91 332.0
Blo12g00960 BCT,CCT 733 1057 HSF AT1G46264 54.6 2.3e-88 322.8
Blo15g00160 . 17 115 HSF AT1G46264 72.7 4.7e-41 165.6
Blo12g00576 . 15 112 HSF AT1G46264 69.4 2.8e-38 156.4
Blo02g00237 . 5 102 HSF AT1G46264 70.4 8.3e-38 154.8
Blo05g00378 . 20 140 HSF AT1G46264 61.2 1.2e-36 151.0
Blo16g01032 . 6 179 HSF AT3G24520 64.4 3.6e-59 225.7
Blo01g00509 CCT 1 163 HSF AT3G24520 69.9 3.7e-56 215.7
Blo08g00287 CCT 6 175 HSF AT3G24520 57.1 8.1e-51 198.0
Blo18g00282 . 17 245 HSF AT4G17750 52.1 7.8e-58 221.9
Blo05g00378 . 38 238 HSF AT4G17750 54.2 1.2e-55 214.5
Blo17g00285 . 39 225 HSF AT4G17750 53.7 8.1e-55 211.8
Blo02g00237 . 9 207 HSF AT4G17750 52.7 2.0e-53 207.2
Blo01g01525 . 17 115 HSF AT4G17750 71.7 4.0e-38 156.4
Blo12g00960 BCT,CCT 734 832 HSF AT4G17750 69.7 2.6e-37 153.7
Blo02g01100 . 30 125 HSF AT4G17750 70.8 9.9e-37 151.8
Blo02g00983 . 35 271 HSF AT5G16820 64.7 4.0e-67 252.7
Blo05g00378 . 37 244 HSF AT5G16820 53.5 1.4e-56 217.6
Blo18g00282 . 40 226 HSF AT5G16820 55.8 5.1e-54 209.1
Blo02g00237 . 11 206 HSF AT5G16820 53.1 1.6e-52 204.1
Blo18g00282 . 25 226 HSF AT1G32330 52.2 6.0e-55 212.2
Blo02g00237 . 3 189 HSF AT1G32330 50.7 3.2e-48 189.9
Blo01g01525 . 15 114 HSF AT1G32330 70.0 2.0e-37 154.1
Blo12g00960 BCT,CCT 732 831 HSF AT1G32330 68.0 1.3e-36 151.4
Blo18g00282 . 40 228 HSF AT3G02990 55.4 1.2e-55 214.5
Blo02g00237 . 11 209 HSF AT3G02990 52.9 5.5e-53 205.7
Blo01g01525 . 5 130 HSF AT3G02990 58.9 2.5e-37 153.7
Blo17g00285 . 30 246 HSF AT2G26150 58.3 3.9e-72 268.9
Blo11g00264 BCT 7 382 HSF AT4G18880 50.6 3.1e-89 325.9
Blo01g01525 . 14 129 HSF AT4G18880 62.1 1.8e-36 150.6
Blo02g00237 . 5 475 HSF AT4G13980 55.1 1.5e-127 453.4
Blo18g00282 . 26 254 HSF AT3G22830 56.0 4.4e-67 252.3
Blo17g00285 . 30 232 HSF AT3G22830 53.3 9.0e-60 228.0
Blo05g00378 . 26 314 HSF AT3G51910 51.6 4.2e-69 258.5
Blo16g00980 BCT 167 373 HSF AT5G54070 51.0 1.4e-50 197.2
Blo15g00160 . 14 120 HSF AT4G36990 63.6 4.0e-38 155.6
Blo12g00576 . 13 112 HSF AT4G36990 65.0 1.7e-36 150.2
Blo02g01100 . 26 326 HSF AT4G11660 52.3 7.2e-80 294.7
Blo01g01525 . 13 116 HSF AT4G11660 75.0 1.7e-44 177.2
Blo12g00960 BCT,CCT 730 833 HSF AT4G11660 71.2 1.6e-42 170.6
Blo12g00576 . 13 111 HSF AT4G11660 70.7 4.0e-38 156.0
Blo12g00576 . 18 212 HSF AT2G41690 54.6 4.9e-45 178.3
Blo01g01525 . 16 340 HSF AT1G46264 56.8 3.8e-91 332.0
Blo12g00960 BCT,CCT 733 1057 HSF AT1G46264 54.6 2.3e-88 322.8
Blo15g00160 . 17 115 HSF AT1G46264 72.7 4.7e-41 165.6
Blo12g00576 . 15 112 HSF AT1G46264 69.4 2.8e-38 156.4
Blo02g00237 . 5 102 HSF AT1G46264 70.4 8.3e-38 154.8
Blo05g00378 . 20 140 HSF AT1G46264 61.2 1.2e-36 151.0
Blo16g01032 . 6 179 HSF AT3G24520 64.4 3.6e-59 225.7
Blo01g00509 CCT 1 163 HSF AT3G24520 69.9 3.7e-56 215.7
Blo08g00287 CCT 6 175 HSF AT3G24520 57.1 8.1e-51 198.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004373 2 1 1 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 6 1 1 43
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo02g00983 Blo_Chr02 FPKM 77.812073 81.867439 45.764797 45.301083 10.446865 6.03401 8.508102 47.164688 51.655315 45.315907