Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00985 ATGACATCAGCCTACTACAAAGGAAATTTGTGCCCTTATTATAATCATGAAGGCGTTGAAGATATTGCAAAGAAGATAGCCCATGATGATTCTTCCTTTTATGGTAATAAGGAATATGGTGACACAAGACATGATTCGAGATCGAATCCTTATCAACCTCGGGAGGATGATGTAAAATGGAACCATCTTATTATTTATCAAGACTCAAAGATAATCGTGACGTTATTCAAGTTGGGAAAAGCTAGTGTTCCCTGCTGGATGTCTCGATCTCCTCGTGGATGGGTGGAGTTCTCTCGGTTCAATCCCTCTGTTCCTGGACCTACCTATGGCGGTGAAGCGGGGGCAATTTCCAGAAGCGGCGGTACGCAGGAGTCAGTGCCGCCTCCGATTCTAAACGCAAATGCGCCGCCGCCGTTTTTGAGCAAGACGTACGATATGGTGGATGACCCTGCCACCGACTCGATCGTGTCGTGGAGCCACACTAACAACAGCTTCGTGGTTTGGAACCCGCCGGAATTTTCTAGGGACCTCTTGCCGAAGTACTTCAAGCACAATAACTTCTCTAGCTTCGTTCGACAGCTCAACACATATGTATGGTTCTTGTTTGTATTCCAATAA 618 46.12 MTSAYYKGNLCPYYNHEGVEDIAKKIAHDDSSFYGNKEYGDTRHDSRSNPYQPREDDVKWNHLIIYQDSKIIVTLFKLGKASVPCWMSRSPRGWVEFSRFNPSVPGPTYGGEAGAISRSGGTQESVPPPILNANAPPPFLSKTYDMVDDPATDSIVSWSHTNNSFVVWNPPEFSRDLLPKYFKHNNFSSFVRQLNTYVWFLFVFQ 205
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38010572 38013807 - BLOR10715 Blo02g00985 57215

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00985 205 Gene3D - 131 201 IPR036388 -
Blo02g00985 205 PRINTS Heat shock factor (HSF) domain signature 190 202 IPR000232 GO:0003700|GO:0006355|GO:0043565
Blo02g00985 205 PRINTS Heat shock factor (HSF) domain signature 177 189 IPR000232 GO:0003700|GO:0006355|GO:0043565
Blo02g00985 205 PRINTS Heat shock factor (HSF) domain signature 139 162 IPR000232 GO:0003700|GO:0006355|GO:0043565
Blo02g00985 205 SMART hsfneu3 135 205 IPR000232 GO:0003700|GO:0006355|GO:0043565
Blo02g00985 205 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-1 112 197 - -
Blo02g00985 205 Pfam HSF-type DNA-binding 139 198 IPR000232 GO:0003700|GO:0006355|GO:0043565
Blo02g00985 205 SUPERFAMILY Winged helix DNA-binding domain 134 200 IPR036390 -
Blo02g00985 205 MobiDBLite consensus disorder prediction 34 53 - -
Blo02g00985 205 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 112 197 IPR027725 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00985 K09419 HSFF; heat shock transcription factor, other eukaryote - csv:101207437 147.132
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00985 Blo-Chr2:38010572 Blo15g00590 Blo-Chr15:13401581 3.76E-30 dispersed
Blo02g00985 Blo-Chr2:38010572 Blo12g00960 Blo-Chr12:27732009 3.86E-27 transposed
Blo02g00985 Blo-Chr2:38010572 Blo17g00285 Blo-Chr17:3018851 4.94E-28 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g705 Blo02g00985 . Bda06g01262 Bda08g00638 . . . . Cmo06g00645 Cmo16g01225 . . . . Sed10g1395 Cpe14g00974 . Bhi11g00015 Tan08g0173 Cmetu05g1605 . . Mch10g1679 . Cla10g00139 Cam10g0138 Cec10g0148 Cco10g0148 Clacu10g0142 Cmu10g0989 Cre10g0400 . . . . Lsi07g01178 . . Cme06g02455 . . . . . . Bma05g00705 . . . . Cma06g00639 Cma16g01175 Car06g00570 Car16g01108 . . . . . . . . . . . . . . . . . Csa03g00150 Chy06g02159 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004648 1 1 1 1 1 2 1 2 2 1 2 2 2 1 1 2 2 2 2 1 1 1 1 1 1 1 1 1 1 2 41
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12051 PF00447 HSF_DNA-bind 1.80E-22 CL0123 Blo TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo02g00985 Blo_Chr02 FPKM 4.995169 5.239268 1.574428 0.960515 4.044578 3.943109 2.963001 3.090666 1.57903 2.800781