Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00996 ATGTCTCTGGCTCCGAATGCTTCGGCAACATCGATTACTGCAAGAGTTGGGTTGTGCTCGAAGCTTTGCGGTGATTTTCCCTCGAGAAGGAGAAGGCCAAGCTTAGATGGAGCTCGAGTTTCGCTGCCATACCTCAGAGCTTCGGCGGAGCAGCGTAGTGAGAGTTTGGAGGAGACTGAGAGCCGCGGGGGATTCAGTAGCCCGGCTATGGAGGTGACGACGTTCGGCCGGAGTTTCAGCGAGGCTGAGTTTCCTGTTTGGGAGAAGATTGGAGCAGTTGTTAGGCTCAGCTATGGAATCGGAATTTACGGCGCAATGGCTCTTGCTGGAAGAACTATATGCTCTTTTACTGGAATTGATTGCATGGGAGGGTTTCATCCTTCGTTGGATGCGATTCTTGAAGGACTTGGCTATGCGGCTCCACCAATTATGGCTCTTCTATTCATACTTGATGATGAAGTAGTGAAGTTGTCACCACATGCTCGCGCCATTAGAGATGTAGAAGATGAGGAGCTACGTAGCTTCTTTTACGGAATGTCGCCATGGCAGTTTATTCTTATGGTCGCTGCAAGTTCATTTGGAGAGGAGCTATTTTACCGTGCAGCAGTTCAGGGAGCAGTAGCTGATATATTTCTAAGAAGCACAGATTTGGTGGCAGATGCTAGAGGAATGGCCTCTCTGGCCGGGGTGCTTCCTCCATTTGTCCCATTTGCGCAAGCTTTTGCAGCTGTTATTACGGCCACCCTGACTGGTTCTCTCTATTATGTTGCTGCATCTCCAAAAGACCCGACTTATGTTGTCTCCCCGGTTCTGCAGTCTCGATCAGATAGAGAAAATGTCAAGAAGCTTTTTGCAGCTTGGTATGAGAGGAGACAAATGAAGAAGATCTACTCTCCTCTCCTTGAAGGTCTTCTAGCTCTCTATCTTGGTTTTGAATGGATACAGACGAATAATCTTCTATCCCCGATTATAACTCATGGGATATACTCGACGGTCATTTTGGGTCACGGACTCTGGAAGATTCACGACCACCGGAGACGACTACGGCAGAGAATTCAGCAACTCAAAGGAGAAGGGAAGAGGTCAAGGTCTTCGCGGGCGATAGGAAGAGAATGGCTTTGCAAGGAGGGGAATTCGCGAAGATGGAGGTCGTTGATTCCTGTCGGCGGTGTCTACGGGTTGTCAAGGGTTGTGAAACACGATGATTCCGTTGTCCCTCCAAGAGAGCTTGGGACAGCCCGCTTACAGGCGAAGACAAAAGCGCGATGTACGAGCTACGACTGCGAGCTTCCTGTGCTGGCAGAGTGCACTGATATTGGCATACAAAGGCGCGTAATTCAATCACTTGCACCATTTCTTGAAAAGTTACCTGGCAATGAGTTCAAACATCCACTCATAAAGTTAGGAACCGGAACCGAACCGGAACAGAACCAGAATCGAGTTCGGTTCCAGTTTCGATTCCGGTTCCTTGCAGTTCCGGTTTCGGTTCCTCACTCTTGGAACCGAGAACCAAATGGGCGGTTCCAAGAGGTCCGAAACTGGAACCGGAACCGAGAACCGGTTTGCCCACCCCTAATAATCGTTGTTGTTCTTCACTTGGTGCTTGATAATAATCCATGA 1620 49.14 MSLAPNASATSITARVGLCSKLCGDFPSRRRRPSLDGARVSLPYLRASAEQRSESLEETESRGGFSSPAMEVTTFGRSFSEAEFPVWEKIGAVVRLSYGIGIYGAMALAGRTICSFTGIDCMGGFHPSLDAILEGLGYAAPPIMALLFILDDEVVKLSPHARAIRDVEDEELRSFFYGMSPWQFILMVAASSFGEELFYRAAVQGAVADIFLRSTDLVADARGMASLAGVLPPFVPFAQAFAAVITATLTGSLYYVAASPKDPTYVVSPVLQSRSDRENVKKLFAAWYERRQMKKIYSPLLEGLLALYLGFEWIQTNNLLSPIITHGIYSTVILGHGLWKIHDHRRRLRQRIQQLKGEGKRSRSSRAIGREWLCKEGNSRRWRSLIPVGGVYGLSRVVKHDDSVVPPRELGTARLQAKTKARCTSYDCELPVLAECTDIGIQRRVIQSLAPFLEKLPGNEFKHPLIKLGTGTEPEQNQNRVRFQFRFRFLAVPVSVPHSWNREPNGRFQEVRNWNRNREPVCPPLIIVVVLHLVLDNNP 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38637462 38648916 - BLOR10726 Blo02g00996 57226

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00996 539 Pfam Type II CAAX prenyl endopeptidase Rce1-like 181 331 IPR003675 GO:0004222|GO:0016020|GO:0071586
Blo02g00996 539 PANTHER OS03G0100030 PROTEIN 10 362 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00996 - - - nnu:104606479 541.576
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00996 Blo-Chr2:38637462 Blo07g01018 Blo-Chr7:29902819 7.16E-08 dispersed
Blo03g01500 Blo-Chr3:41858747 Blo02g00996 Blo-Chr2:38637462 1.74E-11 transposed
Blo09g00393 Blo-Chr9:14832203 Blo02g00996 Blo-Chr2:38637462 1.14E-06 transposed
Blo15g00277 Blo-Chr15:2992258 Blo02g00996 Blo-Chr2:38637462 3.87E-12 transposed
Blo19g00183 Blo-Chr19:7924799 Blo02g00996 Blo-Chr2:38637462 1.23E-08 transposed
Blo02g00996 Blo-Chr2:38637462 Blo03g00128 Blo-Chr3:3745417 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g663 Blo02g00996 . . . . Bpe07g00206 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi07g01212 . . . . . . . . . Bma05g00384 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009121 2 1 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo02g00996 Blo_Chr02 FPKM 11.404496 12.553383 9.278725 9.291128 10.001208 12.094871 10.560934 12.850606 13.026423 12.161801