Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g01024 ATGTTTGAACAGAGTGGTTCGTTGGATTCCGATATGGGGCTTCTTGACTCGATTCGCCGTTATTTATTGGGCGAATCGGACTCTCTGCGAGACGGTAAAGTGATTGTCTCCGATTCCGGCCCTGTTTTCTGTATGAGCTCCAGTTTCAGTAGCTTGTATCCTTGCCTGACGGAGAATTGGGGGGAGCTACCGTTTAAAGTGGATGATTCGGAGGATATGGTCCTCGCCGGAGTGCTCCATGAAGCAATTAATGTCGGTTGGGTGCCCTCACTTACTTCATCTTCTCCGGAAATAGGAAATTTCGGAGTATCTTATGTGAAATCGGAGCCGGAGATCTTTCCCCCGCTGAACCAGTTACGGGAGCTGGAGGAGGTACAACTGGCACGGGCAGTGGTTCCTCCTAGAGGAAAGCATTACCGGGGCGTTCGGCAGCGGCCGTGGGGGAAATTCGCTGCGGAAATTCGGGATCCGGCGAAGAATGGGGCTAGAGTTTGGCTCGGAACCTTTGAGACGGCCGAGAACGCGGCTTTAGCTTACGACCGCGCGGCTTATCGGATGCGCGGCTCAAAAGCTTTACTCAACTTTCCTCTCCGGGTTAACTCCGGTGAACCCGACCCGATTAGAGTTACTTGCAAGCGTTCTTCGCCGGAGCCATCATCGCCCGATGATAGTGGGACGTCGTCTAAGAGGCGGAAGAAGGCGAACGTCTCCTCGGCGTCACCGAGATCGCCTCCTCAAGAGGGGCAAATAAGTAAAACACATATGGGGGAACAAATAGATGCGGTAAAGGTAAACCACATAAAGGCTAGCACACTCGGCGAAGCACTATTAGTTGGGTAG 840 52.86 MFEQSGSLDSDMGLLDSIRRYLLGESDSLRDGKVIVSDSGPVFCMSSSFSSLYPCLTENWGELPFKVDDSEDMVLAGVLHEAINVGWVPSLTSSSPEIGNFGVSYVKSEPEIFPPLNQLRELEEVQLARAVVPPRGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAENAALAYDRAAYRMRGSKALLNFPLRVNSGEPDPIRVTCKRSSPEPSSPDDSGTSSKRRKKANVSSASPRSPPQEGQISKTHMGEQIDAVKVNHIKASTLGEALLVG 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 39681459 39682298 - BLOR10754 Blo02g01024 57254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g01024 279 Gene3D AP2/ERF domain 137 199 IPR036955 GO:0003700|GO:0006355
Blo02g01024 279 ProSiteProfiles AP2/ERF domain profile. 138 196 IPR001471 GO:0003700|GO:0006355
Blo02g01024 279 SUPERFAMILY DNA-binding domain 138 198 IPR016177 GO:0003677
Blo02g01024 279 MobiDBLite consensus disorder prediction 231 253 - -
Blo02g01024 279 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1-RELATED 36 238 - -
Blo02g01024 279 CDD AP2 137 196 IPR001471 GO:0003700|GO:0006355
Blo02g01024 279 SMART rav1_2 138 202 IPR001471 GO:0003700|GO:0006355
Blo02g01024 279 MobiDBLite consensus disorder prediction 204 258 - -
Blo02g01024 279 Pfam AP2 domain 138 188 IPR001471 GO:0003700|GO:0006355
Blo02g01024 279 PRINTS Ethylene responsive element binding protein signature 139 150 IPR001471 GO:0003700|GO:0006355
Blo02g01024 279 PRINTS Ethylene responsive element binding protein signature 162 178 IPR001471 GO:0003700|GO:0006355
Blo02g01024 279 PANTHER DNA-BINDING DOMAIN 36 238 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g01024 Blo-Chr2:39681459 Blo07g00494 Blo-Chr7:11623085 7.32E-51 dispersed
Blo11g00448 Blo-Chr11:3962976 Blo02g01024 Blo-Chr2:39681459 2.12E-33 dispersed
Blo15g00110 Blo-Chr15:912768 Blo02g01024 Blo-Chr2:39681459 1.56E-29 dispersed
Blo02g01024 Blo-Chr2:39681459 Blo02g01025 Blo-Chr2:39717756 5.61E-28 tandem
Blo01g00266 Blo-Chr1:3411639 Blo02g01024 Blo-Chr2:39681459 6.56E-41 transposed
Blo02g01024 Blo-Chr2:39681459 Blo03g00146 Blo-Chr3:3972006 2.29E-143 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12055 PF00847 AP2 1.40E-14 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g01024 K09286 - csv:101203663 309.301