Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g01038 ATGGCCGAAACCTACCTTTTTACTGCTCCCAAAACATCGAAAACTTTTGTCTTGCTTGCCAAGAAAATCGTAGTACTTAACCATCAGAATATCGCCGTTGAGCTCTACTCCAACATTGCTTACAGTGTCGCCAAGGATTTCGTGGTTCGCGGTGAACTCGTTGGACCTCACATTGAGAAGGTGGTGGTGCCCGCGACGAAGCCGTACATCACCTTCGAAGGGGCGGGGAGAGGGTCGACGGTGATAGAGTGGCACGACAGGGCCGGCGACCGGGGTACAAATGGGCAGCAGCTGCGTACTTACAGAACAGCTTCTGTCACTGTCTTTGCCAATTACTTCTCTGCCAGAAACATCAGCTTCAAGAATACTGCTCCGGCACCAATGCCGGGAATGCAAGGTTGGCAGGCGGCAGCGTTTCGTATCTCCGGTGACAAAGCGTATTTTTCCGGCTGCGGGTTTTACGGGGCTCAAGACACTCTTTGTGATGATGCCGGCCGCCATTACTTCAAGGACTGTTACATTGAAGGTTCCATCGACTTCATCTTCGGGAATGGCCGATCTATGTACAAGAACTGTGAGCTACATTCAATAGCGACGAGATTCGGGTCGATAGCGGCCCAAGATAGAAACTCGCCCGACGAGAAAACGGGCTTTGCTTTCGTGGGTTGCAAGGTGACCGGTACTGGGTCTCTTTATGTGGGTCGGGCCATGGGGCAGTACTCTCGTATTGTGTACGCCTACACTTACTTGGATGACGTGATCGCACCCGGCGGCTGGGATGACTGGGACCACGCCAGCAACAAAAATATGACTGTATTTTTTGGAGTGTACAAGTGCTGGGGGCCAGGAGCAGGAGCAGTGGGCGGGCGTGGGGTATCGTGGGCGCGGGAGCTGGATTTTGAATCGGCGCATCCGTTTCTTAGGAAGAGCTTCGTCAATGGTAGACACTGGATTGCGCCATCTGATGCTTAG 972 52.98 MAETYLFTAPKTSKTFVLLAKKIVVLNHQNIAVELYSNIAYSVAKDFVVRGELVGPHIEKVVVPATKPYITFEGAGRGSTVIEWHDRAGDRGTNGQQLRTYRTASVTVFANYFSARNISFKNTAPAPMPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKDCYIEGSIDFIFGNGRSMYKNCELHSIATRFGSIAAQDRNSPDEKTGFAFVGCKVTGTGSLYVGRAMGQYSRIVYAYTYLDDVIAPGGWDDWDHASNKNMTVFFGVYKCWGPGAGAVGGRGVSWARELDFESAHPFLRKSFVNGRHWIAPSDA 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 40228243 40232048 - BLOR10768 Blo02g01038 57268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g01038 323 PANTHER PECTINESTERASE 68-RELATED 54 322 - -
Blo02g01038 323 Gene3D - 54 322 IPR012334 -
Blo02g01038 323 ProSitePatterns Pectinesterase signature 2. 174 183 IPR033131 -
Blo02g01038 323 Pfam Pectinesterase 55 314 IPR000070 GO:0030599|GO:0042545
Blo02g01038 323 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 54 322 - -
Blo02g01038 323 SUPERFAMILY Pectin lyase-like 55 320 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g01038 Blo-Chr2:40228243 Blo14g00522 Blo-Chr14:7391923 2.19E-94 dispersed
Blo02g01038 Blo-Chr2:40228243 Blo05g00245 Blo-Chr5:2743288 6.19E-82 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g01038 - - vvi:100259241 504.982