Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g01054 ATGTCGTCTTCTTCTTCGACTACTCCTCCCTTTTCTTCAGCTCTCGACCACCTCCCCCTCTCCGAGCAGCTATGTTACGTCCACTGCAATATCTGTGACACCATTCTTGCGGTGAGTGTTCCTTGCAGTAGTTTCTTCAAGACCGTGACAGTTCGCTGCGGGCACTGCACTAACCTTCTGCCGGTGAATATGCGAGCCCTGCTCTTTCCTTCGACTAATCCTCAAATTCAGCAGCTGAATCATCCTTTCTTCTCTCCTTCTCTCAATCTCCTGGAAGAGATCCACAATCCATCTCCTAACTTTCTGATCAGCCAAACAAGTGCAAATCATTACACAACTCCACCTAGAGTAACTGACGAGCTTCCAAGAGCTCCAGTTATCATCAGACCTCCAGAGAAGAGACAAAGAGTTCCCTCTGCATATAACAGGTTCATCAAGGACGAGATTCAACGCATCAAGTCTGTGAATCCCGATATATCACACAGAGAAGCTTTCAGTGCAGCAGCTAAGAATTGGGCCCACTTTCCCCATATTCATTTTGGTCTCATACCTGATCAAACTCTGAAGACGAAGACAATCACGCGTCAGGAAGGAGAAGACCATGTTCTGATGAAAGATGGGTTTTTAGCTTCAGCAAATGTGGGTTTCTCCCCTTTCTAA 660 46.52 MSSSSSTTPPFSSALDHLPLSEQLCYVHCNICDTILAVSVPCSSFFKTVTVRCGHCTNLLPVNMRALLFPSTNPQIQQLNHPFFSPSLNLLEEIHNPSPNFLISQTSANHYTTPPRVTDELPRAPVIIRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGLIPDQTLKTKTITRQEGEDHVLMKDGFLASANVGFSPF 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 40693906 40695801 - BLOR10784 Blo02g01054 57284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g01054 219 Pfam YABBY protein 21 182 IPR006780 GO:0007275
Blo02g01054 219 PANTHER PROTEIN YABBY 4 1 216 - -
Blo02g01054 219 Gene3D High mobility group box domain 127 178 IPR036910 -
Blo02g01054 219 PANTHER PROTEIN YABBY 6-RELATED 1 216 IPR006780 GO:0007275
Blo02g01054 219 SUPERFAMILY HMG-box 126 175 IPR036910 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g01054 Blo03g00407 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00625 Blo-Chr1:6967807 Blo02g01054 Blo-Chr2:40693906 1.54E-53 dispersed
Blo02g01054 Blo-Chr2:40693906 Blo12g00165 Blo-Chr12:10789311 3.87E-79 dispersed
Blo02g01054 Blo-Chr2:40693906 Blo03g00407 Blo-Chr3:11414194 1.92E-116 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12061 PF04690 YABBY 2.00E-70 CL0114 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g01054 K25796 - vvi:100267708 325.479