Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g01059 ATGGCTGGTTTCATCCAATTGAACTGTAAATTGCAGTTGGAAAGATTGAAATTCCCGAACCCTTTTCTTCATGCGATTGGTTATATCCATTACCAATCAAAAACAAGTTTTAAAACCTTGAATCCATCGTTTTCTTTTCCTTCCAAGATTTTTCAGAACAACGTAGCAATCTTCTGGGATTTGGACAATAAACCTCCAAATTCAATCCCTCCCTATGAAGCTGCCTTAAAGCTAAAAACAGCGGTTTCCTCTTTCGGGGATGTTCAATATACGGTAGCATATGCCAATAGACACGCATTTAGCTATGTTCCCCAAGTTATCAGGGAACAGAGGACTCAAAGAAAGATGTTGAATCAGTTGGAGAATATAGGTTTGATCAAACCAGCCGAACCATATCTTTGTCGGGTCTGCGGAAGAAAATTTCACACAAACGAAAAGCTGGTCAATCATTTTAAGCAAATTCACGAGCGAGAGCAGCAGAAGAGGTTGAACAAAATTGAGTCGGCAAAGGGGAGCAAGAGGGTGAAGTTGGTATCCATGTACACAATGAAAATGCACAAGTACAAGAACGCAGCTAGGGAGGTTTTGACTCCAAAGATGGGATATGGTTTGGCAGATGAGTTAAAAAGAGCAGGTTTTAGAGTAAATATGGTGTCTAATAAGCCGGAAGCAGCTGATATTGCATTGAAAGATCATATGGTTGAAATGATGGACAAGAGGAGGGTTGGATGCTTGGTTCTTGTCTCTGATGATTTGGACTTTTTGGGTGTTTTGAAGGAGGCCAAATTGAGGTGTCTGAAGACGGTTGTAGTGGGCGATACCGATGATGGGGTGCTGAAACGGAATGCCGATTCTGCATTTTCTTGGAAGGAAGTTTTGATGGGGAAAGCCAAGAAGGAGGCTGCTTCTGTAGTGGGGAAATGGAAGGATCGTGATGTTTTGAAGCGATTGGAGTGGACATATAATCCTGGGTTGGAGAAACAAAATTATGGTCTGATCGATGGTGGAGAATTTCCAAGTGAAGACAAAGATCTTGATTGGGAAGAGCCATGA 1053 41.79 MAGFIQLNCKLQLERLKFPNPFLHAIGYIHYQSKTSFKTLNPSFSFPSKIFQNNVAIFWDLDNKPPNSIPPYEAALKLKTAVSSFGDVQYTVAYANRHAFSYVPQVIREQRTQRKMLNQLENIGLIKPAEPYLCRVCGRKFHTNEKLVNHFKQIHEREQQKRLNKIESAKGSKRVKLVSMYTMKMHKYKNAAREVLTPKMGYGLADELKRAGFRVNMVSNKPEAADIALKDHMVEMMDKRRVGCLVLVSDDLDFLGVLKEAKLRCLKTVVVGDTDDGVLKRNADSAFSWKEVLMGKAKKEAASVVGKWKDRDVLKRLEWTYNPGLEKQNYGLIDGGEFPSEDKDLDWEEP 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 40814703 40815755 - BLOR10789 Blo02g01059 57289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g01059 350 SUPERFAMILY beta-beta-alpha zinc fingers 129 158 IPR036236 -
Blo02g01059 350 PANTHER - 24 334 - -
Blo02g01059 350 CDD PIN_LabA-like 143 273 - -
Blo02g01059 350 Gene3D - 51 293 - -
Blo02g01059 350 Gene3D Classic Zinc Finger 134 190 - -
Blo02g01059 350 ProSiteProfiles Zinc finger C2H2 type domain profile. 132 160 IPR013087 -
Blo02g01059 350 Pfam NYN domain 113 284 IPR021139 GO:0004540
Blo02g01059 350 ProSitePatterns Zinc finger C2H2 type domain signature. 134 155 IPR013087 -
Blo02g01059 350 PANTHER ZINC FINGER (C2H2 TYPE) FAMILY PROTEIN 24 334 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g01059 Blo-Chr2:40814703 Blo17g00872 Blo-Chr17:28647917 2.06E-73 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12062 PF01936 NYN 1.50E-05 CL0280 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g01059 - - qlo:115972370 469.159