Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g01074 ATGGGCGAAAGGGTGAATGCTCCCAACTCTTTGGAGACTCACTTTGTCAATATCCATGAAGTTCTACACGAAGAAGAAGAGGAAGGAGAAGGAGAGGGAGAAGGAGAGGGAGAAGGTTCAAAACGGTCTGAGAAAGACGAGAAGCAAGTAAACAAACCCTTGAGGCTGAAAGAAATGAAGAGAAACCAGACAAGTTTAAGCAGACAAGTTTCCCTGGAGACTGGTTTTTCAGTGCTGATGAAGAGAGAATCAGAGAAGAAGAATGAGAGAATGATTCTCCCAAGAAGTGGGAGAAGCTTTGGAGGGTTTGATTCTGCAAGGAGAATGGGAATGGAGGGAAGAAAAGGAGATTTCAGTATTTTTAGAACTAAGTCTGCAATCAGCAAGCAAAATTCTCTGCTGCCAACAAAGAAAGACAGAGATGTGGATTCTCAGAAAAATGGTGGATACGGAGAAGGTGATGAGTCTATTAATAACAGTGTTTCTGCGGGGAGATACTTTGCTGCTCTGACTGGACCTGAACTCGATCAAGTCAAGGATTCTGAAGATATTCTTCTTCCCAAAGACGAAAAATGGCCATTTCTTCTTCGTTTTCCAATCGGATGCTTCGGTATTTGTCTCGGATTGAGCAGCCAAGCAGTGCTGTGGCGAGCCTTAGCCACCAGCCCAGCCACCCGGTTTCTCCACATTACTCCATTCGTGAACTTCACCCTCTGGCTCATTGCACTTCTAGCCCTTCTCTGTGTTTCTTTCACTTATCTTCTCAAATGCATCTTCTACTTTGAGGCCGTCCGGAGAGAATACTTCCATCCTATTCGAGTCAACTTCTTCTTCGCCCCTTGGGTCGTCTGCATGTTCTTAGCCATCTCCACACCTACTTTGCTTGCATCAGACACCCTTCACCCAGCTATATGGTGTGTTTTCATGGCACCCTATTTTCTCCTCGAGCTCAAGATTTATGGGCAATGGTTGTCCGGAGGAAAAAGAAGACTTTGTAAATTTTTGTGGGCAATTGGGTTTGCTCACTATCTTGTTGTGTTTGTGACTTTGTATCAGAGATTGCCTACCAGTGAAGTTTTGCCTAAGGAATTGCACCCGGTTTACTCCATGTTTATTGCTGCTCCATCTGCTGCTAGCATTTCTTGGCAAGCTCTTTATGGGGATTTTGATGGATTGGCCAGGAATTGCTACTTCATTGCTTTGTTTCTTTATGTTTCTCTCGTCGTTCGGATCAACTTCTTCACCGGCTTTCAATTTTCAGTGGCATGGTGGTCTTACACTTTCCCCATGACAACAGTTTCAGTGGCTACCATCAAGTATGCAGAGCAAGTTCCAACAGTTCTAAGCAAAGGCCTTGCCTTGACTCTTTCATTCATGTCGTCAGCCATGGTGTCTCTTCTATTTGTCTCCACTCTCCTTCATGCTTTTGTTTGGCAGACTCTGTTTCCAAATGATTTAGCCATTGCTATAACAAAGAGAAGACAAGTTAAAGAGAAGAAACCATTGAGAAAAGCCTATGATATCAGACGCTGGACTAAGCAAGCTTTGGCCAAACACAACTCCATAAACAAAGATTCTGATGGACAACAAGAAGCAGCATATTAA 1605 43.8 MGERVNAPNSLETHFVNIHEVLHEEEEEGEGEGEGEGEGSKRSEKDEKQVNKPLRLKEMKRNQTSLSRQVSLETGFSVLMKRESEKKNERMILPRSGRSFGGFDSARRMGMEGRKGDFSIFRTKSAISKQNSLLPTKKDRDVDSQKNGGYGEGDESINNSVSAGRYFAALTGPELDQVKDSEDILLPKDEKWPFLLRFPIGCFGICLGLSSQAVLWRALATSPATRFLHITPFVNFTLWLIALLALLCVSFTYLLKCIFYFEAVRREYFHPIRVNFFFAPWVVCMFLAISTPTLLASDTLHPAIWCVFMAPYFLLELKIYGQWLSGGKRRLCKFLWAIGFAHYLVVFVTLYQRLPTSEVLPKELHPVYSMFIAAPSAASISWQALYGDFDGLARNCYFIALFLYVSLVVRINFFTGFQFSVAWWSYTFPMTTVSVATIKYAEQVPTVLSKGLALTLSFMSSAMVSLLFVSTLLHAFVWQTLFPNDLAIAITKRRQVKEKKPLRKAYDIRRWTKQALAKHNSINKDSDGQQEAAY 534
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 41112586 41114568 - BLOR10804 Blo02g01074 57304

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g01074 534 CDD TDT_SLAC1_like 197 471 - -
Blo02g01074 534 MobiDBLite consensus disorder prediction 1 68 - -
Blo02g01074 534 PANTHER - 10 333 IPR030183 GO:0006873|GO:0008308|GO:0016021
Blo02g01074 534 PANTHER - 333 529 IPR030183 GO:0006873|GO:0008308|GO:0016021
Blo02g01074 534 Pfam Voltage-dependent anion channel 332 472 IPR004695 GO:0016021|GO:0055085
Blo02g01074 534 Pfam Voltage-dependent anion channel 198 306 IPR004695 GO:0016021|GO:0055085
Blo02g01074 534 MobiDBLite consensus disorder prediction 134 148 - -
Blo02g01074 534 PANTHER GUARD CELL S-TYPE ANION CHANNEL SLAC1 10 333 - -
Blo02g01074 534 PANTHER GUARD CELL S-TYPE ANION CHANNEL SLAC1 333 529 - -
Blo02g01074 534 MobiDBLite consensus disorder prediction 35 62 - -
Blo02g01074 534 Gene3D - 194 330 IPR038665 -
Blo02g01074 534 Gene3D - 331 482 IPR038665 -
Blo02g01074 534 MobiDBLite consensus disorder prediction 132 156 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g01074 - - - zju:107434623 785.023
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g01074 Blo-Chr2:41112586 Blo09g00050 Blo-Chr9:775711 1.02E-143 dispersed
Blo02g01074 Blo-Chr2:41112586 Blo15g00106 Blo-Chr15:881583 2.23E-142 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g448 Blo02g01074 . . . Bpe05g00612 . . . Cmo06g00762 Cmo16g01074 . . . . . Cpe14g00848 . . . . . . . . Cla10g00315 Cam10g0330 Cec10g0343 Cco10g0335 Clacu10g0326 Cmu10g1166 Cre10g0576 . . Cone6ag0727 Cone9ag0733 Lsi07g01364 . . Cme06g02649 . . . . . . Bma05g00792 . . . . Cma06g00740 Cma16g01028 . Car16g00979 Cpe08g00780 . . . . . . . . . . . . . . . . Csa03g00338 Chy06g01987 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008638 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 1 1 35
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo02g01074 Blo_Chr02 FPKM 1.173664 1.33041 65.46579 65.033798 6.360345 6.89533 6.557309 0.575604 0.621092 1.081655