Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g01107 ATGCTCGACGGCGATGGAATGGCAACAGTGAGGTGGTTTGACGCCTACGTGGTGCTCGACAGAGGGGGATTGGCGTCGGGGGGCTGCGATCGACGCTTCGGGTCGAAGAGGCAGGGGAACTGGTGGTTCGTGCTAGACCAGCCGAAGGCCATGGTCCAGCTTGTGGTTCGGCCCATGCAGTTTGTCTGTGATAAATGCATGGAAGGGAGAGAAGCTATGGCTCTTTCTGGTGGCTCAGCATCATATTACATTCACAGAGGAGGTTTTAGTGGGCCTGGCTTGGGAAATCAGACCGCCAATCTGCACTCCACACAGGATTTCAGGCCATTTTCGAACTCCACCATTCCCACTCAGCCAAATGCTCGGTGTGGCTCAGTAGGACCGGCGTTTTCAGTGGAGTCTTCGCAGGGAAATTACTCTCTTGGCATTAACGTCGGAGTGTCAGCTGGAGCTCCGGCTAGTGAACCAGTGCGGAAGAAAAGAGGGAGGCCTCGGAAATACGTACCTGATGGGCCAGTTTCACTGGGACTGTCTCCGATGTCTGTTGATTCCAATCAAAACTCTGGTCCGAATTCAGTGAACCCTAAACGGCCAAGGGGAAGACCACCTGGTTCTGGAAGGAAACAACAATTAGCGTTGCTTGGTGAATGGATGGACAGTTCAGCTGGACAAGCTTTTGCCCCACATGTCATGCACATCGGAGCCGGAGTGGACATTGTTGCAAAAATATTGTCATTTTCGCAACAGAAGGGAAGAGCTGTTTGCATAATGTCTGGAAATGGTACAGTTTCTTCCATGACGCTACGGCAACCAGCATCGTCGGAGGTGGGCCGAAATTTTGAGGGGCGATTCCAGATATTGTGTTTATCAGGTTCTTACTTGGTCTCTGAAGATGGAGCCCCGCATAATCGAACTGGAGGAGTAAGTGTTTCTCTTGCCAGTCCTGATGGTCAGGTGATTGGCGGTGCCGCTGATTCCCTCATTGCAGCTGCCCCTGTTCAGGTAATAGTATCGAGTTTTGTTTATGGTGGTTCAAAGACGAAGAGCAAGCAAGTGGCTGCTCCGAAAAGTGACGACAGTTCCAAGCCTCAGCCCAGTGATGAATTAGCTCCGCAATCAACCACTCCCGATCAAACTTACACTCCATCTACAACCAGGTTTTGGCCAGGGTCCGGTCCAGTCCTCAAAAACCCTCATACCGGCATCGATTTAAGGCGAGGATGA 1224 51.72 MLDGDGMATVRWFDAYVVLDRGGLASGGCDRRFGSKRQGNWWFVLDQPKAMVQLVVRPMQFVCDKCMEGREAMALSGGSASYYIHRGGFSGPGLGNQTANLHSTQDFRPFSNSTIPTQPNARCGSVGPAFSVESSQGNYSLGINVGVSAGAPASEPVRKKRGRPRKYVPDGPVSLGLSPMSVDSNQNSGPNSVNPKRPRGRPPGSGRKQQLALLGEWMDSSAGQAFAPHVMHIGAGVDIVAKILSFSQQKGRAVCIMSGNGTVSSMTLRQPASSEVGRNFEGRFQILCLSGSYLVSEDGAPHNRTGGVSVSLASPDGQVIGGAADSLIAAAPVQVIVSSFVYGGSKTKSKQVAAPKSDDSSKPQPSDELAPQSTTPDQTYTPSTTRFWPGSGPVLKNPHTGIDLRRG 407
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 42065849 42072274 - BLOR10837 Blo02g01107 57337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g01107 407 CDD DUF296 228 340 IPR005175 -
Blo02g01107 407 Pfam Plants and Prokaryotes Conserved (PCC) domain 228 341 IPR005175 -
Blo02g01107 407 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 67 394 - -
Blo02g01107 407 MobiDBLite consensus disorder prediction 178 194 - -
Blo02g01107 407 ProSiteProfiles PPC domain profile profile. 223 361 IPR005175 -
Blo02g01107 407 MobiDBLite consensus disorder prediction 150 208 - -
Blo02g01107 407 PRINTS AT-hook-like domain signature 158 168 IPR017956 GO:0003677
Blo02g01107 407 PRINTS AT-hook-like domain signature 194 205 IPR017956 GO:0003677
Blo02g01107 407 SUPERFAMILY AF0104/ALDC/Ptd012-like 224 341 - -
Blo02g01107 407 MobiDBLite consensus disorder prediction 348 407 - -
Blo02g01107 407 MobiDBLite consensus disorder prediction 348 390 - -
Blo02g01107 407 Gene3D - 228 354 - -
Blo02g01107 407 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 67 394 IPR039605 GO:0003680
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g01107 Blo03g00211 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g01107 Blo-Chr2:42065849 Blo16g00434 Blo-Chr16:17141839 1.77E-87 dispersed
Blo14g00215 Blo-Chr14:1861674 Blo02g01107 Blo-Chr2:42065849 1.74E-12 transposed
Blo15g00142 Blo-Chr15:1327749 Blo02g01107 Blo-Chr2:42065849 2.13E-29 wgd
Blo02g01107 Blo-Chr2:42065849 Blo03g00211 Blo-Chr3:4867311 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g01107 - - zju:107429897 413.305