Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g01110 ATGAGCATCCAGTTCGATCCACACGACAGTGAATTGAAAAGTTCTGAAACAATGTTTGAAGGTAGCCATATATCATCTTTGGTGAAGTGGTTAAATGATATGCTTCCTCATTTAAGTTTACCAGTGGAATCGTCAGATAAAGAATTAAGAGCATGTTTAATGGATGGTTCTGTTTTATGCAGCATCCTGAACAAATTATGTCCCGGTTTGGTTGAAGTGAAAGAATCTTTGCAACCTGGTCTATCAAATGTGGAAAGCTTTCTGGCAGTTTTGGATGAATTAGGATTGCCAAACTTTGAAAGATCAGATTTGGAGCAGGGATTGATGGAGCCAGTTCTACAGTGCCTTAGTACTCTCCGATCATCATTTGATTTGAACATTGGAGAAAGAGGTTCCCAAAACCATTCAAAGAAAGGATGGGATCTAACTGAGGTAGACTCTTTTGAGGGACCTGAAGATCCAGAAGGTAATATTTTGGCTCATGGGCTACATTCTAGTGAACATGGGGAAGAGGCGACAAGAAATTTATTTGAGTCCAGATTTCAAGATTCTCACAGTATTTCTGTTATGTCAGAGCCATCAACTGCTCAACCCGGACATGAGTTTCATGAGGGGTGTCAAATAGAGCAAGGATGTTTCTCTGAAGATACTATTGTGAAATTAATGAAATCAAAGACTTTAAGTAATGCCTCGTTTCAATCACTTTTCAGTATAGTTAATGGAATCCTAGATGACAGCATTGAGAGAAAAAATGGAGATGTATCTCATCAGGTGGCATTCTTGTTGAGAAAAGTTATGCAAGTGATTGAACAACGAATTTCAACTGAAGCAGAAAACTTAAAAAATCAAAACTCTTTTTATCATACTCGGGAAGAAAAGTATAAATCTAAAATAAGAGTACTTGAAACACTTGCAGTTGGGACTACAGAAGAAAATGAGGTAGTGATGAACCAGCTTCAGCAAATAAAGATTGAAAAGTTTGAAATGGAAGAGAAGAAAAAGCACACGGATCAGGATTTTGTGACAATGAAGAAACAGAAAGATCTTAGTGACAACAAGGTTTTGAGACTGAAAGAGGATTTAGAAAAGACAAAGAAAGCTCATGAAAATTATTGTATGCAATTAGAAGCAGATGCTAAGGCAAAGAAAGTTGGTTTGGAGAATAAGTTAATTGAACTTGGATGCCTTTTGAATGAATCGATGTTGAAGGTCAAAGATGTTGAAACTTTTTCTGAATCGAAATCAAGTAGATGGAAAAAGAGAGAGCGCATTTACCAGAGCTTTATAGAGTATCAGTTTGGAGCCTTACAGAACTTGAGGGTCGTCTTGAAGTCTACAAAACATGAAGTTTTAAAGATGAAACGACGTTACTCGGAGGAACTTAATTACCTGGGGTTGAAGCTTAGAGCATTGATAGATGCCGCCGAAAAATATCATGCAACTCTCATAGAAAATAGAAGATTGTATAACGAAGTCCAAGATTTGAAAGGTAATATTAGAGTGCATTGTCGTATAAGACCATTCTTTTCTGGGCAAAATAAGAAGCAAACTGCGATAGAATACATTGGGGACAATGGTGAAATAGTAATCTCAAATCCATTGAAACAAGGAAAAGACAGTCGCAGACTATTCAAGTTCAACAAGGTGTTTGGCCCTACATCTTCTCAAGAGGAGATATTCATTGAAACTCAACCTTTGATACGCTCTGTTCTTGATGGGTACAATGTTTGTATATTTGCTTATGGACAAACCGGCTCGGGAAAGACTTATACAATGAGTGGCCCGAGTATAGCATCAAAGGAGGATTGGGGAGTCAACAATCGAGCTCTTAATGACCTTTTCGAAATTTCCCAAAGTAGAACAAATTCCATTTTATATGAAGTAGGTGTGCAAATGATTGAGATATATAATGAACAAAATGAGTATGTTTCCTTTAACTTGCGCACACTTGGGATTTGGAATACCTCTCAACCTAATGGGTTGGCTGTTCCTGATGCGTGCATGTATCCTGTTAAATCCACAGCAGATGTCTTGGAGTTGATGGATATTGGGATGACTAATCGAGCTGTTGGTGCCACAGCTCTAAATGAAAGAAGCAGCAGATCTCATAGTATACTCACAGTTCATGTTCGTGGCGTGGACTTGGAGACAGATGCTGTCTTGCGGGGTAATCTCCATTTGGTGGACCTTGCTGGTAGTGAAAGAGTGGATCGCTCTGAAGCAACGGGAGATAGACTTAAAGAGGCACAACATATAAATAAGTCACTGTCTGCTCTTGGAGATGTAGTCTTTGCTCTGGCCCAAAAGAACCAACATGTGCCCTACAGAAATAGCAAATTAACTCAAGTCCTTCAAAGTTCTTTAGGTGGTCAGGCAAAAACCCTAATGTTTGTACAGCTTAATCCTGACGCGGATTCCTACTCAGAAACAATAAGCACTTTGAAGTTTGCAGAAAGGGTTTCTGGTGTTGAGTTGGGTGCTGCTCGGAGCAATAAAGAGGGAAGATATGTTAGGGAACTCATGGAGCAGGTGGCAGCCCTCAAGGACACATTGGCAAGCAAAGATGCTGAGATAGAGCGACTGCAGCATCTCAAAGCTAATGTCAATGGTCCAAAGCCTGGGCTTAGTTCTCTTCGGCATGGGTCTTCCTCTCCAAGAAGACACTCCATAGGAACATCCCGGCTAAATGAAAGCCTGTCAGGAAGGAAAGCTTCCACTTCTGATTTTGATAATTGCTCCGAGTTCAGTGACAAAAATTCTGAATGTGGTTCACATCACTCAATGGACGACTCTGGACTACACAAGGATTTTTCCTCTCGGTTAAATCAAGGAGGGGATGTTGGGCAGATTCCTAGTGAAGATGTCGAACTTTTAGGCTTCGGGGAGGATGATTCCGAGGAGAGATTAAGTGATATATCGGATGGTGGTCTCTCGATGGGGACAGAAACAGACGGTTCGATATGCAGCATTGTGGAATATACTCTGTTTCCCGAAGTTTCTAAATCTTCAGAAAATAGAGAAGTTGACGTTAGGCAGGACGGTGAGGAATCAATCAGTGACGCACCAACAAACAACAATGGTACCGAGAATATTACTACTCCTACAAACAAGTCCTTCTTGGAGAGATCGAGGTTTCCATCCCTACTTTCAAAGCCTTCCAACAAATTGTTGCAGACAAAGCTGCCTCAGGGTTCATCAAGCAGAAGCTCCTCAAAGGTTTCTTCAACACAAGACTATAAGAAGGTATTAGAGAATACTCTTGAACAAGTTGAGGAAGAAGTTATTTATGCCGAAGATGGACCATTACTATCTTTGGAGCCTCAATCGGAAGAGAAAGGTTGTCAAGAAGAACAAGTTACCAAAACTAAAGAAGACATTACGGGTTACAAAATGGCATTCATCTCACAAACTGGTCTATCAAACTGCCTTCATACTGATATGATATATAGTAAAGCTGGAAACCGTATAGATTTTAAACTGGCATATACTCGGGAGGTATCCCAAGTGAAGGGAACTTCCCTTGCTTTGTCTTCCTTATGGCATGATTCTGCCAAGAACATAAACAGTCTCCATATGGGAGGCACAAGAAGTGAACTAAAAAGAAAGAACCTGGTGATTGTTGCTGCCAGCCCTCCTACAGAAGATGCTGTCATTGCGGCAGAGCCATTAGTGAAAGAAGATCTTGTAGGATATCTTGCCTCTGGATGCAAGCCAAAAGAAAAATGGAGAATAGGAACAGAGCATGAGAAGTTTGGTTTTGAGATTGAAACCTTACGTCCTATGAAATATGAGCAGATAGCTGAGTTGCTCCATGGAATCGCAGAGAGATTTGATTGGGAGAAAATAATGGAGGGTGGGAATATTATTGGACTCAAGCAGGGAAAACAAAGCATATCACTAGAACCTGGTGGTCAGTTTGAACTGAGTGGTGCTCCTCTTGAAACTTTACATCAAACCTGTGCTGAAGTTAATTCACATCTCTATCAGGTTAAAGCTGTAGCAGAGGAAATGGGAATAGGATTCCTTGGAATTGGTTTCCAGCCTAAATGGGGATTGAAAGACATTCCTGTTATGCCCAAGGGAAGATACGAGATTATGAGGAATTACATGCCAAGAGTTGGAACCCTTGGGCTTGATATGATGTTTAGGACCTGTACAGTGCAGGTAAATCTAGATTTTAATTCTGAGACTGACATGATCAGAAAATTTCGTGCTGGTCTTGCTTTACAACCTATAGCAACTGCCATATTTTCAAATTCACCCTTCACTGAAGGAAAGCCGAACGGTTACCTTAGCATGAGAAGCAACATTTGGACAGATACTGATAATAATCGTGCTGGTATGCTCCCCTTTGTTTTTGATGACTCGTTTGGATTTGAGCAATATGTTGATTATGCCCTTGATGTTCCCATGTACTTTGTGTATCGGAAAAAGAAGTATATTGACTGTAGCGGACTGTCTTTTCGGGACTTTATGGCCGGAAAACTTCCTTGCATACCTGGTGAATTGCCGACCTTCAATGATTGGGAGAATCATCTGACCACCATATTTCCTGAAGTCAGACTGAAGAGGTACTTGGAGATGAGAGGGGCTGATGGTGGGCCTTGGAGGAGGCTGTGCGCATTGCCAGCATTTTGGGTTGGTTTGTTATATGATGAAGTTTCACTGCAAAATGTTTTAGATCTGACAGCTGATTGGACTCCAGAAGAAAGGCAAATGTTAAGATATAAGGTTCCATCAACTGGTCTTAATACTCCATTCCGTGATGGAATGCTGAAGCATGTGGCAGAAGATGTTCTAAAGTTTGCAAAGGATGGATTGGAAAGAAGAGGCTTCAAGGAATTAGGCTTCTTGAATGCGGTGGATGAGGTGGTTAAAACAGGTGTAACTCCAGCTGAAAAGCTTTTGGAATTATATCATGGGAAGTGGGGACAGAGAGTGGATCCAGTTTATGAGGAGCTGCTCTACTGA 4971 40.74 MSIQFDPHDSELKSSETMFEGSHISSLVKWLNDMLPHLSLPVESSDKELRACLMDGSVLCSILNKLCPGLVEVKESLQPGLSNVESFLAVLDELGLPNFERSDLEQGLMEPVLQCLSTLRSSFDLNIGERGSQNHSKKGWDLTEVDSFEGPEDPEGNILAHGLHSSEHGEEATRNLFESRFQDSHSISVMSEPSTAQPGHEFHEGCQIEQGCFSEDTIVKLMKSKTLSNASFQSLFSIVNGILDDSIERKNGDVSHQVAFLLRKVMQVIEQRISTEAENLKNQNSFYHTREEKYKSKIRVLETLAVGTTEENEVVMNQLQQIKIEKFEMEEKKKHTDQDFVTMKKQKDLSDNKVLRLKEDLEKTKKAHENYCMQLEADAKAKKVGLENKLIELGCLLNESMLKVKDVETFSESKSSRWKKRERIYQSFIEYQFGALQNLRVVLKSTKHEVLKMKRRYSEELNYLGLKLRALIDAAEKYHATLIENRRLYNEVQDLKGNIRVHCRIRPFFSGQNKKQTAIEYIGDNGEIVISNPLKQGKDSRRLFKFNKVFGPTSSQEEIFIETQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPSIASKEDWGVNNRALNDLFEISQSRTNSILYEVGVQMIEIYNEQNEYVSFNLRTLGIWNTSQPNGLAVPDACMYPVKSTADVLELMDIGMTNRAVGATALNERSSRSHSILTVHVRGVDLETDAVLRGNLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVVFALAQKNQHVPYRNSKLTQVLQSSLGGQAKTLMFVQLNPDADSYSETISTLKFAERVSGVELGAARSNKEGRYVRELMEQVAALKDTLASKDAEIERLQHLKANVNGPKPGLSSLRHGSSSPRRHSIGTSRLNESLSGRKASTSDFDNCSEFSDKNSECGSHHSMDDSGLHKDFSSRLNQGGDVGQIPSEDVELLGFGEDDSEERLSDISDGGLSMGTETDGSICSIVEYTLFPEVSKSSENREVDVRQDGEESISDAPTNNNGTENITTPTNKSFLERSRFPSLLSKPSNKLLQTKLPQGSSSRSSSKVSSTQDYKKVLENTLEQVEEEVIYAEDGPLLSLEPQSEEKGCQEEQVTKTKEDITGYKMAFISQTGLSNCLHTDMIYSKAGNRIDFKLAYTREVSQVKGTSLALSSLWHDSAKNINSLHMGGTRSELKRKNLVIVAASPPTEDAVIAAEPLVKEDLVGYLASGCKPKEKWRIGTEHEKFGFEIETLRPMKYEQIAELLHGIAERFDWEKIMEGGNIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPRVGTLGLDMMFRTCTVQVNLDFNSETDMIRKFRAGLALQPIATAIFSNSPFTEGKPNGYLSMRSNIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKYIDCSGLSFRDFMAGKLPCIPGELPTFNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEVSLQNVLDLTADWTPEERQMLRYKVPSTGLNTPFRDGMLKHVAEDVLKFAKDGLERRGFKELGFLNAVDEVVKTGVTPAEKLLELYHGKWGQRVDPVYEELLY 1656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 42104405 42121049 - BLOR10840 Blo02g01110 57340

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g01110 1656 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 498 861 IPR027417 -
Blo02g01110 1656 ProSiteProfiles Calponin homology (CH) domain profile. 21 124 IPR001715 GO:0005515
Blo02g01110 1656 Coils Coil 837 864 - -
Blo02g01110 1656 MobiDBLite consensus disorder prediction 919 936 - -
Blo02g01110 1656 PRINTS Kinesin heavy chain signature 724 742 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo02g01110 1656 PRINTS Kinesin heavy chain signature 693 710 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo02g01110 1656 PRINTS Kinesin heavy chain signature 573 594 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo02g01110 1656 PRINTS Kinesin heavy chain signature 773 794 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo02g01110 1656 SMART kinesin_4 496 831 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo02g01110 1656 PANTHER KINESIN-LIKE PROTEIN KLP-3 15 1078 - -
Blo02g01110 1656 SMART ch_5 23 119 IPR001715 GO:0005515
Blo02g01110 1656 Gene3D - 1208 1656 - -
Blo02g01110 1656 Pfam Glutamate-cysteine ligase family 2(GCS2) 1276 1566 IPR006336 GO:0004357|GO:0042398
Blo02g01110 1656 SUPERFAMILY Glutamine synthetase/guanido kinase 1234 1654 IPR014746 GO:0003824
Blo02g01110 1656 MobiDBLite consensus disorder prediction 876 918 - -
Blo02g01110 1656 MobiDBLite consensus disorder prediction 1099 1119 - -
Blo02g01110 1656 Gene3D Kinesin motor domain 440 825 IPR036961 -
Blo02g01110 1656 Gene3D - 21 124 IPR036872 -
Blo02g01110 1656 MobiDBLite consensus disorder prediction 961 980 - -
Blo02g01110 1656 MobiDBLite consensus disorder prediction 1051 1078 - -
Blo02g01110 1656 Pfam Kinesin motor domain 504 821 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo02g01110 1656 ProSiteProfiles Kinesin motor domain profile. 498 823 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo02g01110 1656 TIGRFAM glu_cys_lig_pln: glutamate--cysteine ligase 1225 1656 IPR011556 GO:0004357|GO:0006750
Blo02g01110 1656 MobiDBLite consensus disorder prediction 1003 1039 - -
Blo02g01110 1656 Coils Coil 358 378 - -
Blo02g01110 1656 MobiDBLite consensus disorder prediction 1017 1039 - -
Blo02g01110 1656 PANTHER KINESIN-4-LIKE ISOFORM X1 15 1078 - -
Blo02g01110 1656 Coils Coil 1073 1093 - -
Blo02g01110 1656 Pfam Calponin homology (CH) domain 26 121 IPR001715 GO:0005515
Blo02g01110 1656 MobiDBLite consensus disorder prediction 864 951 - -
Blo02g01110 1656 SUPERFAMILY Calponin-homology domain, CH-domain 23 120 IPR036872 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g01110 K10406 KIFC2_3; kinesin family member C2/C3 - jre:109014466 1308.51
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo02g01110 Blo03g00212 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g01110 Blo-Chr2:42104405 Blo15g00073 Blo-Chr15:615216 0 dispersed
Blo09g00398 Blo-Chr9:14897840 Blo02g01110 Blo-Chr2:42104405 1.17E-09 dispersed
Blo02g01110 Blo-Chr2:42104405 Blo03g00214 Blo-Chr3:4908011 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g320 Blo02g01110 Blo03g00212 Bda06g00112 Bda08g00516 Bpe05g00646 Bpe07g00107 . Bma14g00667 . . Cma02g01449 Cma15g01228 Car02g01216 Car15g01107 . . Cpe05g00339 . . . . . . . Cla10g00365 Cam10g0377 Cec10g0397 Cco10g0390 Clacu10g0383 Cmu10g1218 Cre10g0632 Cone8ag0301 Cone12ag0307 . . . Csa05g00279 Chy09g01230 . . . . . . Bpe11g00603 Bma05g00820 Bma12g00075 . Cmo02g01485 Cmo15g01292 . . . . . Cpe13g00155 Bhi12g00265 . . . . . Lcy12g1649 Cla01g00260 . Cec01g0258 Cco01g0273 . . Cre09g2254 Lsi09g00255 . . Cme09g01765
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002869 5 3 4 3 3 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 1 1 1 1 1 1 1 5 1 2 54
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo02g01110 Blo_Chr02 FPKM 15.470078 16.5196 60.376583 56.584908 23.847315 20.840246 24.051395 1.736816 1.893796 2.178124