Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo02g01115 | ATGGGTTTTCCAGAGTACCGTACTGAACTTCTCTTTCCAAATCTCTTCATCTACTCACTCTCTATCCTAGATATTATCAGAAAGCTCGTCTGCGCCATCTTTCGCTGTCTGGGTCTCCCCGATTTCCTCGAACCCGATATTTTTCCGCCGCAACAGAGCTATTACCACCATCTCCACAACCCCACCCATTCCTTCCAGTTCGACTCCACTTCCGCTGCACTGATCCGGGAGCTTTCACCCGTTGTCAAATTTTCGGACTTCGTCGACCCGCCTGAGAACTGCGCCGTTTGCCTCCATGAGTTCAAGGCTGACGACGATATCCGACGGCTCGCGAATTGTCTCCACGTGTTTCACCGGAGCTGCGTCGACCGCTGGATGGGTTACGGTCAGAAAACTTGCCCTTTATGTCGAACGTCGTTTATTCCGGCGAGTTCACGCAGTGTTTTTAACGAGAGTATTTGGTCTGCTTCTGGTGAATATTCCTATATTACCTAG | 495 | 50.3 | MGFPEYRTELLFPNLFIYSLSILDIIRKLVCAIFRCLGLPDFLEPDIFPPQQSYYHHLHNPTHSFQFDSTSAALIRELSPVVKFSDFVDPPENCAVCLHEFKADDDIRRLANCLHVFHRSCVDRWMGYGQKTCPLCRTSFIPASSRSVFNESIWSASGEYSYIT | 164 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 42280118 | 42280612 | - | BLOR10845 | Blo02g01115 | 57345 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo02g01115 | 164 | PANTHER | - | 1 | 158 | - | - | |
Blo02g01115 | 164 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 88 | 140 | IPR013083 | - | |
Blo02g01115 | 164 | Pfam | Ring finger domain | 93 | 137 | IPR001841 | - | |
Blo02g01115 | 164 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 1 | 158 | - | - | |
Blo02g01115 | 164 | SUPERFAMILY | RING/U-box | 74 | 143 | - | - | |
Blo02g01115 | 164 | ProSiteProfiles | Zinc finger RING-type profile. | 94 | 137 | IPR001841 | - | |
Blo02g01115 | 164 | SMART | ring_2 | 94 | 136 | IPR001841 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo02g01115 | Blo-Chr2:42280118 | Blo06g00115 | Blo-Chr6:4705444 | 1.70E-14 | dispersed | |
Blo02g01115 | Blo-Chr2:42280118 | Blo05g00778 | Blo-Chr5:28435059 | 1.55E-16 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo02g01115 | K16281 | - | fve:101313016 | 199.134 |