Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g01115 ATGGGTTTTCCAGAGTACCGTACTGAACTTCTCTTTCCAAATCTCTTCATCTACTCACTCTCTATCCTAGATATTATCAGAAAGCTCGTCTGCGCCATCTTTCGCTGTCTGGGTCTCCCCGATTTCCTCGAACCCGATATTTTTCCGCCGCAACAGAGCTATTACCACCATCTCCACAACCCCACCCATTCCTTCCAGTTCGACTCCACTTCCGCTGCACTGATCCGGGAGCTTTCACCCGTTGTCAAATTTTCGGACTTCGTCGACCCGCCTGAGAACTGCGCCGTTTGCCTCCATGAGTTCAAGGCTGACGACGATATCCGACGGCTCGCGAATTGTCTCCACGTGTTTCACCGGAGCTGCGTCGACCGCTGGATGGGTTACGGTCAGAAAACTTGCCCTTTATGTCGAACGTCGTTTATTCCGGCGAGTTCACGCAGTGTTTTTAACGAGAGTATTTGGTCTGCTTCTGGTGAATATTCCTATATTACCTAG 495 50.3 MGFPEYRTELLFPNLFIYSLSILDIIRKLVCAIFRCLGLPDFLEPDIFPPQQSYYHHLHNPTHSFQFDSTSAALIRELSPVVKFSDFVDPPENCAVCLHEFKADDDIRRLANCLHVFHRSCVDRWMGYGQKTCPLCRTSFIPASSRSVFNESIWSASGEYSYIT 164
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 42280118 42280612 - BLOR10845 Blo02g01115 57345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g01115 164 PANTHER - 1 158 - -
Blo02g01115 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 140 IPR013083 -
Blo02g01115 164 Pfam Ring finger domain 93 137 IPR001841 -
Blo02g01115 164 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 158 - -
Blo02g01115 164 SUPERFAMILY RING/U-box 74 143 - -
Blo02g01115 164 ProSiteProfiles Zinc finger RING-type profile. 94 137 IPR001841 -
Blo02g01115 164 SMART ring_2 94 136 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g01115 Blo-Chr2:42280118 Blo06g00115 Blo-Chr6:4705444 1.70E-14 dispersed
Blo02g01115 Blo-Chr2:42280118 Blo05g00778 Blo-Chr5:28435059 1.55E-16 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g01115 K16281 - fve:101313016 199.134