Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g01124 ATGACAGGTGCATCGAGTGGTCTTGGTGAAGAGACCACGCGGGTTCTTGCACTCCGTGGGGTCCATGTTATTATGGCTGTAAGGAACATACAAGCCGGAAGAAATGTAAAAGAAGCCATTCTTAAGGAAATCCCTTCTGCTAAAATTGATGTAATGGAATTAGATCTCAGTTCATTGGCATCTGTAAGAAAATTCAGTGCAGAATATGTTTCATCAGGTCTACCTCTGGACATCCTAATAAACAATGCAGGAGTGATGGCTACTCCATTTATGCTTTCCCATGACAATATAGAACTGCAGTTTGCCACTAACCATTTGGGACACTTTCTTTTGACAAATCTTCTACTGGAAACCATGAAAAAAACTGTGCTTGAAACCAAGAAAGAAGGAAGGATTGTAAATCTGTCGTCAGACGGTCATCGATTACCTTATAGGGAGGGAATTCGTTTTGACAGGATTAACATGGAATCAGAATATAACACTATTTTTGCTTATGGACAATCAAAGCTAGCCAACATATTGCATGCCAACGAGCTTGCTAGGCGCTTGAAGGAAGATGGTGTCGAAATAACGGCTAACTCCGTTCATCCCGGAGCAATAGTCACTAATCTTCTACGCCATCATAGCTTCCTTAATGCGATTGCCAATAAACTCGGTAAATTTGTGCTCAAGAGTGTTCAACAGGGAGCGGCAACTCAATGCTACGTCGCTTTGCACTCCCAACTCAATGGTGTTAGTGGCGAATATTTTGCGGACAGCAATAAATCGAAGCCGTCTTCTCATGCTGAAAACTGCGAATTGGCTAAGAAACTATGGGATCTCAGTATGACATTAACCAACTCGGGAATCCTTTTCGAATTTCGACGGTCAGGCTCGGGATTAGGAAATGGTTATTATTTACTTTTCTGTGGTTGTTCAGGAGGAGTTTGGATCTTAGAGATGGGTGTAGAGGAAATGGACGTGGCGGCCCTGAAGCTCATGGGATCGGAATCAGAGAGTTTTGTACACGCTGAGGCTGCAGCGAAGGAGGTGGATTTGTGTCAGTCAAACCGAGTTTTTGCCCTCCCAAGCTCTTCAATTGAACATGGCAACTCTTATTTTAGTCGAGAAGATGCAATGACCTCAATCAAACAACCAGAGGTTACATTGGACAAAATTTTGTGTGGTAAACTTGGTAAGGACTCTGTTGAGCTGTCCATTTCTCAGGGTGCAGATGGATCTGAACCTCATGATAGAGGTGGCAAAAATCATATCTTGTGCGGCTCCAGTACTGAAGTAAGGTTACAACGAAAAGCAGGAAAAGTGTCAAGGGGTAGTTGTTTGTATTCTAGGAGGCAAGATGTAGTTCAATTGAAAAATCGCATAATTGCAGACGATGTGGGGGACATTTCAGATAAGCTTGGATCACATCCAAAAAAGTTTCTCTCACCAGAGAAAGCTCAATTGGTGAAACAAAAGAATAACTTCAATAGCAAGCGAGCTGATAGGAAAATTTTGAAAGTTTCTACAAAGTCTAAATGTGATTCCTTTTCTATGAAAGCTGGTTCTGGAAGCATCTATTCAGCTCCATCAGCTGCCAGTAACTTTTTTGGGGGATATGGCCTTAAATCAGATGTTCATGATATCACAAAGCTTGTAGATGATTTACCATTGAAGGATCTTCTAGGTGGCACTTGCGAATGTCCTAGTTTAAGCAAAGACGTTCCAAAAAAAGAAGCTAAGGCAAACGAAAGTTTTCTGCAATCAGTCAGAAAAGCTTGCTCTATACTTCAACTCCCAAGGCTTCTCCAGTCCCTAAATATAGAGGCAGATAGTGTTTCCACCAAAAAAATGTCTACTAGTATTTTAAGTTGTGTTTCTGTGGCTAGTGGTGCGGATGGTGATATAGGAGATGACTGTATGACAGAGTTATCTTCATGTAACAAGGATTCTTGTTGCAAGGCTGATATTCCTGCTAACCCACTTGACGTTTTACTATACAAACCTCATGATATTAGTGAACTATTGGCTCTTCCTCCGCCCAAAGATTTGGATTCTTTACTCCAGGAGGCAACTAAACCTTCTCTATCTTCAAAGATTGCTCCTGATATGCGATCAGGCAAGCAGTTATCTCGTAGAGCTAGCTTACTTCCTTTTCAGTGGTCACATTCTTACAGTGGGCACTGTAAACCAATTTCAGATTCGGCTAAGTTATCTGCAAGTAGGAGTTCATGCCCTGGTAGATGGTCACGAGTCAAAAATTTTGCAATCTCTCGAGGGAACAGTAGTGGTAGTTTTATTAACTTGGAATCACTAACTTACAATCAGAGTTTAGTTCCTCTAAAACCGAGAATGGCTCCTAGTTCACTGGATAAAGTTTGGATGGATGTTTCTGATAATAATCGTCAATGCGGCTGGAAATTGTTGTCTTCTGCCACTAGTTTGAAAGCTTCCTTTCTTTCAATTGGAGGACAATGCCCCGTGGTTGTAGGCGCTGCTCAAACTCTATTCGACATGGCAACTCATTCCTCGAGGCAGAATATAAATGAGGTTGTGAGGTGGCCTAAAAAAACTTCGCAAAAGGCCATGAAAGCAAGGAAGTTGAAATCAAATGAGAATCCCGGAGAAGTATTAACAACATCCAATTCAGGATCAGTTTCGGGCTATCCGATGAAAAACATGGGTCGGTTTTCGTCCTCCAAAAAACCAAGGCTCTGTACAAATGAGAACAAGAAAGATTTTGGCCAGTCTAATTACAGAAAAGGACCATCCAACTGGCCAACTACACGATCAAGTCAACTGTCGCCAAGCAAATCAAGCAAAGATTCGATATTGGAAACAAGATATTCTACTGTTGGGATTATAAAACAATCATGCATGATGCCTCCTCCAGCGCGGCTTTCAGATAAGACTTGCGAGGGCCAACAGAAGGTAAGAAAACTGATGGCAATGGAATGGAGGAGGGGGAAGGACAGAATAGAGTGA 2964 41.87 MTGASSGLGEETTRVLALRGVHVIMAVRNIQAGRNVKEAILKEIPSAKIDVMELDLSSLASVRKFSAEYVSSGLPLDILINNAGVMATPFMLSHDNIELQFATNHLGHFLLTNLLLETMKKTVLETKKEGRIVNLSSDGHRLPYREGIRFDRINMESEYNTIFAYGQSKLANILHANELARRLKEDGVEITANSVHPGAIVTNLLRHHSFLNAIANKLGKFVLKSVQQGAATQCYVALHSQLNGVSGEYFADSNKSKPSSHAENCELAKKLWDLSMTLTNSGILFEFRRSGSGLGNGYYLLFCGCSGGVWILEMGVEEMDVAALKLMGSESESFVHAEAAAKEVDLCQSNRVFALPSSSIEHGNSYFSREDAMTSIKQPEVTLDKILCGKLGKDSVELSISQGADGSEPHDRGGKNHILCGSSTEVRLQRKAGKVSRGSCLYSRRQDVVQLKNRIIADDVGDISDKLGSHPKKFLSPEKAQLVKQKNNFNSKRADRKILKVSTKSKCDSFSMKAGSGSIYSAPSAASNFFGGYGLKSDVHDITKLVDDLPLKDLLGGTCECPSLSKDVPKKEAKANESFLQSVRKACSILQLPRLLQSLNIEADSVSTKKMSTSILSCVSVASGADGDIGDDCMTELSSCNKDSCCKADIPANPLDVLLYKPHDISELLALPPPKDLDSLLQEATKPSLSSKIAPDMRSGKQLSRRASLLPFQWSHSYSGHCKPISDSAKLSASRSSCPGRWSRVKNFAISRGNSSGSFINLESLTYNQSLVPLKPRMAPSSLDKVWMDVSDNNRQCGWKLLSSATSLKASFLSIGGQCPVVVGAAQTLFDMATHSSRQNINEVVRWPKKTSQKAMKARKLKSNENPGEVLTTSNSGSVSGYPMKNMGRFSSSKKPRLCTNENKKDFGQSNYRKGPSNWPTTRSSQLSPSKSSKDSILETRYSTVGIIKQSCMMPPPARLSDKTCEGQQKVRKLMAMEWRRGKDRIE 987
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 42519464 42527642 + BLOR10854 Blo02g01124 57354

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g01124 987 CDD retinol-DH_like_SDR_c_like 2 272 - -
Blo02g01124 987 PANTHER F22C12.19 319 985 - -
Blo02g01124 987 MobiDBLite consensus disorder prediction 849 938 - -
Blo02g01124 987 Gene3D - 1 283 - -
Blo02g01124 987 Pfam short chain dehydrogenase 2 144 IPR002347 -
Blo02g01124 987 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 254 IPR036291 -
Blo02g01124 987 PRINTS Glucose/ribitol dehydrogenase family signature 124 140 IPR002347 -
Blo02g01124 987 PRINTS Glucose/ribitol dehydrogenase family signature 74 85 IPR002347 -
Blo02g01124 987 PRINTS Glucose/ribitol dehydrogenase family signature 188 205 IPR002347 -
Blo02g01124 987 MobiDBLite consensus disorder prediction 866 938 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g01124 - - - pvy:116107497 503.056
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo02g01124 Blo03g00227 BCT
Blo02g01124 Blo03g00229 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g01124 Blo-Chr2:42519464 Blo15g00173 Blo-Chr15:1770188 1.30E-130 dispersed
Blo03g00229 Blo-Chr3:5099696 Blo02g01124 Blo-Chr2:42519464 0 transposed
Blo02g01124 Blo-Chr2:42519464 Blo03g00227 Blo-Chr3:5088903 1.41E-166 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g51 Blo02g01124 Blo03g00229 Bda06g00123 Bda08g00501 Bpe05g00663 Bpe07g00092 . . . Cmo16g00629 . . . . . Cpe14g00490 . . . . . . . . Cla07g00744 Cam07g0796 Cec07g0862 Cco07g0831 Clacu07g0777 Cmu07g0784 Cre07g1136 Cone8ag0273 Cone12ag0280 . . . . . Cme07g01611 . . . . . . Bma05g00837 Bma12g00062 . . . . Cma16g00579 . . . . . . . . . . . . . . . . . . . Csa04g00614 Chy07g01197 .
Vvi2g310 Blo02g01124 Blo03g00227 . Bda08g00502 Bpe05g00662 . . . . Cmo16g00644 . Cma15g01280 . Car15g01154 . Cpe14g00505 . . . . . . . . Cla07g00772 Cam07g0831 Cec07g0886 Cco07g0863 Clacu07g0808 Cmu07g0814 Cre07g1168 Cone8ag0615 . . Cone9ag0789 . Csa05g00120 Chy09g01373 Cme07g01630 . . . . . . Bma05g00836 . . . . . . . . . . Bhi12g00031 . . Lac11g0044 . . Lcy12g0041 Cla01g00106 Cam01g0105 Cec01g0106 Cco01g0107 Clacu01g0103 Cmu01g0104 Cre09g2402 Lsi09g00092 Csa04g00593 . Cme09g01920
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003101 2 1 2 3 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 11 3 1 52
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo02g01124 Blo_Chr02 FPKM 0.162879 0.0 0.0 0.0 1.053109 1.066294 0.0 0.0 0.0 0.0