Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g01125 ATGGAAGCTTTCAGTTTTCTCAAGTACTGGAGAGGAAATGGCGTTGGCGCCTCCTCCGATGTTCTTCCCCAAACGCGTTCCTCTTCCGCCGAAACAACCACCATCGTCGCTGCTGTCTCTCAGAGTCGGCCGGAAGACGACGAAGACGACAACGACGGCGACGAAGGACCTTTTTTTGACTTGGAGTTCAGTGTGCCTAATGAGGATGATCCCACCGGAGCAGAGCTTGGCCGGAGCGATGCAATAGATGAAGGTCAAGACGATAACGTCAATGAAAGTGAGGAAGAAGAAGATAGTGAGGAAGAAAGGGAGTTTAATTTCACGCTCTCTGACTCGAGCAATGACCGTGCTGATACGAATCTCTCACTTTCTCCTTCCGACGATTTGTTCTTCAAAGGAAAACTTGTTCCACTGGAGACCTCGTCGATCGTCATTAATGGATCTGAACAAAACTCCAAGCCTCAGTTCAAAGTCTCATTGTTAAAATCAGCTACAAAGTTTCGGGTTTTCATGTTGGGTTTCAAGAAATCGAACAATGTGGAAGAAAAAACTGAGTCAAATGAATCAAATTTCTCGGCAGCCAAACACCCGCAAGAAACGCCACAGAACCAGCCGGAAAGACATCAACAGCCGAATGGGAGGCGTTTTACCGTGAAGTTTAAGGTGGAGGAGGTTCCGATAATGTCTCTGTTCACGAGAGACAACAGCTCCAGGAGTGACTCTGCTAATAAGCCGGCAGTTCCGAAGCAGAACTCGGACGAAGTAACGGCCGATGAGAAAAAGTTTCCCAAAGACGTGATGAACAAGTATTTAAAACTGGTAAAGCCTCTTTATATTCGGGTTTCAAGAAAATACGGCGGGAAGCTGAAGTTTTCCGGCCAACTAAGCTTAGCTCCCGGAGCTAAAACTGTAGGATCCCCATTGTCAGAGGTGACCCGGAAACCAACTCCGGGTAAATCAGCGGGAGAGAAGAGCCAAACAATGCCTGAAGCTAAGGAAGCGCCGGGGCAGGCGGCAGCATCGGAGAACAATGCAAAGAGCCAGAAATCTGGAAGCATGCCTGCTGGGCTTAGAGTTGTTCGTAAGCATTTAGGGAAAAGCCGGTCGGCTTCTTCAGCTGTATCGGCAGCGCCGGCGGGACCAGCGCCGTCGAGGAGAGACGATTCTCTGCTGCAGCAGCAAGATGGGATACAAAGCGCTATTCTGCACTGCAAGAGATCTTTCAATGCCTCCAGAGGTGCCATTTTCATCACCTTTTTCTCTCATTCTGATTCGCCGCCATTATCAATATCGGTTAGCACCTCTCCGAACGAGAAATCAACAGACGAGAAGGAAAACCACCGACGATGA 1350 48.96 MEAFSFLKYWRGNGVGASSDVLPQTRSSSAETTTIVAAVSQSRPEDDEDDNDGDEGPFFDLEFSVPNEDDPTGAELGRSDAIDEGQDDNVNESEEEEDSEEEREFNFTLSDSSNDRADTNLSLSPSDDLFFKGKLVPLETSSIVINGSEQNSKPQFKVSLLKSATKFRVFMLGFKKSNNVEEKTESNESNFSAAKHPQETPQNQPERHQQPNGRRFTVKFKVEEVPIMSLFTRDNSSRSDSANKPAVPKQNSDEVTADEKKFPKDVMNKYLKLVKPLYIRVSRKYGGKLKFSGQLSLAPGAKTVGSPLSEVTRKPTPGKSAGEKSQTMPEAKEAPGQAAASENNAKSQKSGSMPAGLRVVRKHLGKSRSASSAVSAAPAGPAPSRRDDSLLQQQDGIQSAILHCKRSFNASRGAIFITFFSHSDSPPLSISVSTSPNEKSTDEKENHRR 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 42531761 42533192 - BLOR10855 Blo02g01125 57355

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g01125 449 PANTHER MEMBRANE-ASSOCIATED KINASE REGULATOR 2-RELATED 1 445 - -
Blo02g01125 449 MobiDBLite consensus disorder prediction 13 123 - -
Blo02g01125 449 MobiDBLite consensus disorder prediction 18 40 - -
Blo02g01125 449 MobiDBLite consensus disorder prediction 231 260 - -
Blo02g01125 449 PANTHER MEMBRANE-ASSOCIATED KINASE REGULATOR 2-RELATED 1 445 IPR039619 GO:0005886
Blo02g01125 449 MobiDBLite consensus disorder prediction 421 437 - -
Blo02g01125 449 MobiDBLite consensus disorder prediction 298 389 - -
Blo02g01125 449 MobiDBLite consensus disorder prediction 86 104 - -
Blo02g01125 449 MobiDBLite consensus disorder prediction 180 215 - -
Blo02g01125 449 MobiDBLite consensus disorder prediction 184 211 - -
Blo02g01125 449 MobiDBLite consensus disorder prediction 421 449 - -
Blo02g01125 449 MobiDBLite consensus disorder prediction 231 250 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g01125 - - - zju:107430220 408.683
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo02g01125 Blo03g00230 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g01125 Blo-Chr2:42531761 Blo07g00358 Blo-Chr7:5728051 2.00E-12 dispersed
Blo02g01125 Blo-Chr2:42531761 Blo03g00230 Blo-Chr3:5107299 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g55 Blo02g01125 Blo03g00230 Bda06g00124 Bda08g00500 Bpe05g00664 Bpe07g00091 . . . Cmo16g00625 . . . . . Cpe14g00487 Cpe05g00634 . . . . . . . Cla07g00738 Cam07g0791 Cec07g0856 Cco07g0826 Clacu07g0772 Cmu07g0781 Cre07g1132 . . Cone14ag0046 . . . . Cme07g01608 . . Bda07g01911 . . . Bma05g00838 Bma12g00061 . Cmo02g01105 . . Cma16g00576 . . . . . . . . . . . . . . . . . . . Csa04g00618 Chy07g01194 .
Vvi2g260 Blo02g01125 . Bda06g01089 Bda08g00750 Bpe05g00392 . . . . . Cma02g00947 Cma15g01326 Car02g00697 Car15g01191 . . Cpe05g00766 . . . . . . . . . . . . . . Cone8ag0561 . . . . Csa05g00156 Chy09g01342 . . . . . . . Bma05g00540 Bma12g00419 . Cmo02g00956 Cmo15g01390 . . . . . . Bhi12g00075 . . . . . Lcy12g1508 Cla01g00138 Cam01g0142 Cec01g0140 Cco01g0144 Clacu01g0138 Cmu01g0138 Cre09g2368 Lsi09g00129 . . Cme09g01889
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005486 2 1 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 1 40
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo02g01125 Blo_Chr02 FPKM 26.535852 28.652111 21.172735 21.480967 34.328815 31.769279 33.137341 28.066196 23.915518 24.315113