Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g01131 ATGAAAGCCACCTCTAATGGCGTTTTTCAAGGAGACAATCCTCTTCATTATGCTTTACCTCTTCTCATACTGCAGATATGTCTTGTTGTTATTCTCACTCGTCTTCTTGCTTTTCTTTTTCGTCCTTTGAGACAGCCTCGTGTTATTGCTGAGATTGTTGGAGGAATATTACTTGGTCCATCAGTTCTGGGTCGGAACAAAGACTATCTGAACACAATTTTTCCTGCGAGAAGCCTGACAGTCTTGGACACTTTAGCCAATCTTGGCCTCCTGTTCTTCCTCTTTCTCGTAGGCTTAGAGTTGGACCCGAAATCTCTCCGGCGAACTGGAAAAAAAGCTTTAACCATAGCAGCAGCAGGGATTAGCCTTCCGTTTCTTCTCGGAATCGGAACGTCTTTTGTGCTCCGGGGAACTATTTCTAAAGGAGTAAACGGACCTCCTTTTCTTGTTTTCATGGGTGTTGCTCTTTCCATCACCGCCTTCCCTGTTTTGGCTCGGATTTTAGCAGAACTCCGGCTTTTAACCACGGATGTGGGTCGAATGGCCATGTCTGCAGCTGCCGTAAACGACGTCGCAGCTTGGATACTCCTAGCTCTCGCTATTGCCCTCTCTGGCACTGGCCATTCGCCACTTGTCTCTCTCTACGTTTTCATATGTGGAAGCGCCTTCGTGCTGTTTTGCATATTCGTTTGCCCGCGGATTTTCAAATGGATGGCTCAGCGATGTCCGGAGGGTGAGCCAGTCAGCGAACTATACGTCTGTGCCACTTTAGTGACTGTTTTGGCGGCTGGTTTTATCACAGACATGATCGGAATTCACGCCCTTTTTGGAGCGTTCGTGGTCGGAATTCTCCTACCCAAGGAAGGGCCATTTGCCGGGACTCTGGTGGAGAAAGTTGAGGATCTGGTTTCGGGTTTATTCCTCCCTTTATACTTTGTTTCGAGTGGTTTGAAGACTAACGTAGCAACCATCGAAGGAGCTCAATCATGGGGCCTTCTCGTTTTAGTCATTTTCACAGCTTGTTTTGGGAAAATCGTGGGTACTATGATTGCTTCGTCCCTCTGGAAGATCCCTTTCAGTGAGGCCATCGCCCTTGGATTCTTGATGAACACCAAGGGGTTGGTGGAGCTCATCGTCCTCAACATTGGCAAAGACAGAAAGGTGTTGAATGATCAAACTTTTGCTATCATGGTTCTAATGGCGATCTTCACAACCTTCATCACCACGCCAATGGTCATGGCGGTTTACAAACCGGTAAAGAGGGCAAGGAAGGCGGATTACAAGATCAGAACTGTCGCCAGAAAAGAGCCAAACAGTCAACTGAGAATTCTAACTTGTTTCCACACCATTCGGAACATACCCACCATGATTAACCTCATTGAAGCTTCTCGAGGAACTGATAAGAAGGAAGGACTCTGTGTCTATGCCATGCACATGCTCGAACTCACAGAAAGAACTTCCGCTGTTTTAATGGTCCACAAAGCTAGAAAGAATGGTCTACCGTTCTGGAATAAGGGCATCCGATCAGACTCCGACCAAGTTATCGTTGCATTTGAAGCTTTCCGGCAGCTCAGCAGGGTCTCGATTCGTACGATGACGGCAATATCTCCAATGTCGGAAATGCACGAGGATATATGCGGGAGTGCAGATAGGAAAAGAGCAGCGATTATAATACTTCCGTATCATAAGCATCAGAGATTGGATGGGACTTTCGAGACTACTCGGCCGGAATTCCGATTAGTTAACCAGAAAGTTCTCGATCACGCCCCCTGTTCCGTCGGGATTCTGGTCGATCGGGGGCTCGGAGGAGGCACCCATGTCTCTGCAAGCAATCTTTCTTCAACCTTGACAGTTCTCTTCTTCGGTGGCCGCGACGATCGCGAAGCTCTGGCTTATGGAGCTAGAATGGCGGAGCATCCCGGAATTACCCTAACCCTGGTTCGCTTCGTCAAAAATCCGGATAATGCAGGGGAAAGAGCCGAAGCGGAGATGAATCCAGATCCGATCACCCATTCATCGATAATGGAAGACGAGGAAGTAATTTACGAGTTCAAGAACAAGATAAAATACGGTGAAGAAGAGTCGATCAAGTACGAAGAGAGAATGGTGAGAAACGGGCCAGAAACCGTGGACGCAATCAAGGAATTCAGCAAATGCAATCTGATCTTAATCGGGACAAACCCGGAAGGGAGGTTAGTTTCCGCCATTAACGTGAAAGTCGAACACCCAGAGCTTGGGCCAATTGGAAACGTATTGACCACGCCGGAGTTCTCAACATCGGCGTCGGTGCTGGTGGTTCAGCAGTACCAGGGTCAGAAAGTATCGGATAGAATTTCAGCGCCAGTTGTTTCGCCTGATGAAGACCCAGAAGTGAAATGA 2379 47.88 MKATSNGVFQGDNPLHYALPLLILQICLVVILTRLLAFLFRPLRQPRVIAEIVGGILLGPSVLGRNKDYLNTIFPARSLTVLDTLANLGLLFFLFLVGLELDPKSLRRTGKKALTIAAAGISLPFLLGIGTSFVLRGTISKGVNGPPFLVFMGVALSITAFPVLARILAELRLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGTGHSPLVSLYVFICGSAFVLFCIFVCPRIFKWMAQRCPEGEPVSELYVCATLVTVLAAGFITDMIGIHALFGAFVVGILLPKEGPFAGTLVEKVEDLVSGLFLPLYFVSSGLKTNVATIEGAQSWGLLVLVIFTACFGKIVGTMIASSLWKIPFSEAIALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMVLMAIFTTFITTPMVMAVYKPVKRARKADYKIRTVARKEPNSQLRILTCFHTIRNIPTMINLIEASRGTDKKEGLCVYAMHMLELTERTSAVLMVHKARKNGLPFWNKGIRSDSDQVIVAFEAFRQLSRVSIRTMTAISPMSEMHEDICGSADRKRAAIIILPYHKHQRLDGTFETTRPEFRLVNQKVLDHAPCSVGILVDRGLGGGTHVSASNLSSTLTVLFFGGRDDREALAYGARMAEHPGITLTLVRFVKNPDNAGERAEAEMNPDPITHSSIMEDEEVIYEFKNKIKYGEEESIKYEERMVRNGPETVDAIKEFSKCNLILIGTNPEGRLVSAINVKVEHPELGPIGNVLTTPEFSTSASVLVVQQYQGQKVSDRISAPVVSPDEDPEVK 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 42644316 42647044 - BLOR10861 Blo02g01131 57361

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g01131 792 PANTHER CATION/H(+) ANTIPORTER 18 1 775 - -
Blo02g01131 792 Gene3D - 465 737 - -
Blo02g01131 792 PANTHER CATION/H + ANTIPORTER 1 775 - -
Blo02g01131 792 Gene3D - 21 427 IPR038770 -
Blo02g01131 792 Pfam Sodium/hydrogen exchanger family 28 411 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g01131 - - - zju:107430239 1159.05
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo02g01131 Blo03g00234 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g01131 Blo-Chr2:42644316 Blo03g00235 Blo-Chr3:5160484 0 dispersed
Blo01g00795 Blo-Chr1:11815146 Blo02g01131 Blo-Chr2:42644316 0 transposed
Blo05g00511 Blo-Chr5:8749897 Blo02g01131 Blo-Chr2:42644316 0 transposed
Blo07g00657 Blo-Chr7:21540106 Blo02g01131 Blo-Chr2:42644316 2.55E-154 transposed
Blo10g00488 Blo-Chr10:10392731 Blo02g01131 Blo-Chr2:42644316 1.17E-152 transposed
Blo02g01131 Blo-Chr2:42644316 Blo03g00234 Blo-Chr3:5154183 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g75 Blo02g01131 Blo03g00234 Bda06g00131 . . . . . . . . . . . . . . . . . . . . . Cla07g00724 Cam07g0779 Cec07g0842 Cco07g0817 Clacu07g0763 Cmu07g0770 Cre07g1122 . . . . . . . Cme07g01598 . . . . . . . Bma12g00057 . . . . . . . . . . . . . . . . . . . . . . . . Csa04g00626 Chy07g01187 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Blo05g00511 . 11 811 Antiporter Super Family AT2G13620 73.5 0.0e+00 1178.7
Blo01g00795 . 211 967 Antiporter Super Family AT2G13620 67.7 4.3e-295 1010.7
Blo03g00235 . 7 782 Antiporter Super Family AT2G13620 50.4 1.4e-213 740.0
Blo02g01131 BCT 4 771 Antiporter Super Family AT2G13620 50.8 3.0e-211 732.3
Blo01g01126 . 76 818 Antiporter Super Family AT3G53720 69.8 3.4e-294 1007.7
Blo03g00234 BCT 81 779 Antiporter Super Family AT3G53720 51.1 1.1e-188 657.1
Blo03g00235 . 80 785 Antiporter Super Family AT3G53720 50.5 5.3e-186 648.3
Blo03g00235 . 1 804 Antiporter Super Family AT5G41610 67.4 1.9e-303 1038.5
Blo02g01131 BCT 1 788 Antiporter Super Family AT5G41610 67.2 1.6e-297 1018.8
Blo03g00234 BCT 1 779 Antiporter Super Family AT5G41610 67.0 2.3e-296 1015.0
Blo05g00511 . 11 797 Antiporter Super Family AT5G41610 50.8 2.5e-215 745.7
Blo01g01126 . 1 801 Antiporter Super Family AT5G41610 50.9 9.4e-210 727.2
Blo02g01131 BCT 1 769 Antiporter Super Family AT4G23700 68.1 6.6e-296 1013.4
Blo03g00235 . 1 801 Antiporter Super Family AT4G23700 65.2 8.1e-294 1006.5
Blo03g00234 BCT 7 779 Antiporter Super Family AT4G23700 61.5 3.0e-272 934.9
Blo03g00235 . 8 780 Antiporter Super Family AT3G17630 64.9 5.1e-277 950.7
Blo02g01131 BCT 1 769 Antiporter Super Family AT3G17630 65.0 2.4e-274 941.8
Blo03g00234 BCT 9 778 Antiporter Super Family AT3G17630 63.4 1.3e-272 936.0
Blo05g00511 . 11 793 Antiporter Super Family AT3G17630 50.6 4.9e-219 758.1
Blo01g01126 . 8 803 Antiporter Super Family AT3G17630 51.5 1.1e-207 720.3
Blo02g01131 BCT 1 783 Antiporter Super Family AT1G64170 58.5 6.4e-243 837.4
Blo03g00235 . 5 783 Antiporter Super Family AT1G64170 59.3 3.2e-242 835.1
Blo03g00234 BCT 9 779 Antiporter Super Family AT1G64170 55.4 1.4e-229 793.1
Blo05g00511 . 11 811 Antiporter Super Family AT2G13620 73.5 0.0e+00 1178.7
Blo01g00795 . 211 967 Antiporter Super Family AT2G13620 67.7 4.3e-295 1010.7
Blo03g00235 . 7 782 Antiporter Super Family AT2G13620 50.4 1.4e-213 740.0
Blo02g01131 BCT 4 771 Antiporter Super Family AT2G13620 50.8 3.0e-211 732.3
Blo02g01131 BCT 1 783 Antiporter Super Family AT1G64170 58.5 6.4e-243 837.4
Blo03g00235 . 5 783 Antiporter Super Family AT1G64170 59.3 3.2e-242 835.1
Blo03g00234 BCT 9 779 Antiporter Super Family AT1G64170 55.4 1.4e-229 793.1
Blo02g01131 BCT 1 769 Antiporter Super Family AT4G23700 68.1 6.6e-296 1013.4
Blo03g00235 . 1 801 Antiporter Super Family AT4G23700 65.2 8.1e-294 1006.5
Blo03g00234 BCT 7 779 Antiporter Super Family AT4G23700 61.5 3.0e-272 934.9
Blo03g00235 . 1 804 Antiporter Super Family AT5G41610 67.4 1.9e-303 1038.5
Blo02g01131 BCT 1 788 Antiporter Super Family AT5G41610 67.2 1.6e-297 1018.8
Blo03g00234 BCT 1 779 Antiporter Super Family AT5G41610 67.0 2.3e-296 1015.0
Blo05g00511 . 11 797 Antiporter Super Family AT5G41610 50.8 2.5e-215 745.7
Blo01g01126 . 1 801 Antiporter Super Family AT5G41610 50.9 9.4e-210 727.2
Blo03g00235 . 8 780 Antiporter Super Family AT3G17630 64.9 5.1e-277 950.7
Blo02g01131 BCT 1 769 Antiporter Super Family AT3G17630 65.0 2.4e-274 941.8
Blo03g00234 BCT 9 778 Antiporter Super Family AT3G17630 63.4 1.3e-272 936.0
Blo05g00511 . 11 793 Antiporter Super Family AT3G17630 50.6 4.9e-219 758.1
Blo01g01126 . 8 803 Antiporter Super Family AT3G17630 51.5 1.1e-207 720.3
Blo01g01126 . 76 818 Antiporter Super Family AT3G53720 69.8 3.4e-294 1007.7
Blo03g00234 BCT 81 779 Antiporter Super Family AT3G53720 51.1 1.1e-188 657.1
Blo03g00235 . 80 785 Antiporter Super Family AT3G53720 50.5 5.3e-186 648.3
Blo06g00594 . 35 744 Antiporter Super Family AT3G52080 55.4 2.2e-219 759.2
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000528 2 8 3 3 2 4 4 4 4 4 4 4 4 3 3 4 4 5 2 4 4 2 2 3 4 4 2 5 5 5 111
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo02g01131 Blo_Chr02 FPKM 109.51136 91.302788 45.253967 37.967793 22.588888 33.732769 20.165686 71.276123 72.756233 54.935379